CF509637

Overview
NameCF509637
Unique NameCF509637
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509637 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 3.772e-55
Identity = 90/172 (52.33%), Postives = 124/172 (72.09%), Query Frame = 1
Query:    1 YNRNIVKKLTAKRAIGTPARPGWVLPSFIFALYNENQKPGPGTERHFGLLYPNGSHVYEIDLSGNAPEKEYEPLPKPTNNEPYKGKIWCVAAKVANTTALSSALSYACSQGNKTCDPIQPGKPCAKPGSLVWKASYAFSSYWSQFRKLGGTCYFNGLATQTIKDPSHGSCKF 516
            YNRN++KK++A   IGTP+RPG  +P+F+F+L+NENQK G GT+RH+G+L+P+GS +Y++D +G  P   + PLPKPTNN PYKG++WCV  + AN T L   L  AC+Q N TC  + PG+ C +P S+ W ASYA +SYW+QFR     C+FNGLA +T  +P +  CKF
Sbjct:  302 YNRNLIKKMSASPPIGTPSRPGLPIPTFVFSLFNENQKSGSGTQRHWGILHPDGSPIYDVDFTGQTPLTGFNPLPKPTNNVPYKGQVWCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFRNQSIQCFFNGLAHETTTNPGNDRCKF 473          
BLAST of CF509637 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.227e-31
Identity = 67/196 (34.18%), Postives = 109/196 (55.61%), Query Frame = 1
Query:    1 YNRNIVKKLTAKRAIGTPARPGWVLPSFIFALYNENQKPGPGTERHFGLLYPNGSHVYEIDLSGN--------------APEKEYEPLPKPTNNEPYKG------KIWCVAAKVANTTALSSALSYACSQGNKTCDPIQPGKPCAKPGSLVWKASYAFSSYWSQFRKLGGTCYFNGLATQTIKDPSHGSCKFQV*P 528
            YN N+++ +      GTPA+PG  +  ++F+L+NEN+KPG  +ER++G+ Y NG++VY +D +G               +P     P+    +     G      K WC+A+  A+ T L +AL +AC  GN  C  +QP +PC +P +++  ASYAF++Y+ Q       C FNG + +  KDPS+G+C + + P
Sbjct:  286 YNTNLIRHVIGDP--GTPAKPGEEIDVYLFSLFNENRKPGIESERNWGMFYANGTNVYALDFTGENTTPVSPTNSTTGTSPSPSSSPIINGNSTVTIGGGGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNCLYMIAP 479          
BLAST of CF509637 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 9.355e-30
Identity = 65/170 (38.24%), Postives = 98/170 (57.65%), Query Frame = 1
Query:    1 YNRNIVKKLTAKRAIGTPARPGWVLPSFIFALYNENQKPGPGTERHFGLLYPNGSHVYEIDLSGNAPEKEYEPLPKPTNNEPYKGKIWCVAAKVANTTALSSALSYACSQGNKTCDPIQPGKPCAKPGSLVWKASYAFSSYWSQFRKLGGTCYFNGLATQTIKDPSHGSC 510
            YN NI++ +   +  GTPA+PG  +  +IF+L+NEN+K G  +ER++GL YP+ + VY++D +G +    +      TN+       WC+A+  A+   L  AL +AC  GN  C  IQP +PC +P +LV  AS+ F+SY+ Q R     C F G   +  KDPS+  C
Sbjct:  287 YNSNIIRHVVTNQ--GTPAKPGEAMNVYIFSLFNENRKAGLDSERNWGLFYPDQTSVYQLDFTGKS--NGFHSNSSGTNSSGSSNS-WCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKC 451          
BLAST of CF509637 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.009e-28
Identity = 60/172 (34.88%), Postives = 99/172 (57.56%), Query Frame = 1
Query:    1 YNRNIVKKLTAKRAIGTPARPGWVLPSFIFALYNENQKPGPGTERHFGLLYPNGSHVYEIDLSGNAPEKEYEPLPKPTNNEPYKGKIWCVAAKVANTTALSSALSYACSQGNKTCDPIQPGKPCAKPGSLVWKASYAFSSYWSQFRKLGGTCYFNGLATQTIKDPSHGSCKF 516
            +N N++K++      G P++P   + ++I+ LYNE+++ GP +ER++G+L+PNG+ VY + LSG +                    ++CVA   A+   L   L++AC QG   C  IQPG+PC  P  +   AS+AF+ Y+ + +  GGTC F+G A  T +DPS+ +C +
Sbjct:  288 FNTNLIKRVLNNS--GPPSQPDIPINTYIYELYNEDKRSGPVSERNWGILFPNGTSVYPLSLSGGSSSAALNG-----------SSMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAY 446          
BLAST of CF509637 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.493e-27
Identity = 61/172 (35.47%), Postives = 98/172 (56.98%), Query Frame = 1
Query:    1 YNRNIVKKLTAKRAIGTPARPGWVLPSFIFALYNENQKPGPGTERHFGLLYPNGSHVYEIDLSGNAPEKEYEPLPKPTNNEPYKGKIWCVAAKVANTTALSSALSYACSQGNKTCDPIQPGKPCAKPGSLVWKASYAFSSYWSQFRKLGGTCYFNGLATQTIKDPSHGSCKF 516
            YN N+++ +  K   GTP  PG  + ++I+ LYNE+ +PGP +E+++GL Y NG+ VY + L+G         L   T N+ +     C+A +  +   L +AL +AC  G   C  +  G+ C +P  +V  ++YAF++Y+ +  K  G+C F G+AT T  DPS G+C F
Sbjct:  285 YNSNLIQHVINKT--GTPKHPGTAVTTYIYELYNEDTRPGPVSEKNWGLFYTNGTPVYTLRLAGAGAI-----LANDTTNQTF-----CIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDPSRGTCVF 444          
BLAST of CF509637 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.804e-26
Identity = 65/177 (36.72%), Postives = 92/177 (51.98%), Query Frame = 1
Query:    1 YNRNIVKKLTAKRAIGTPARPGWVLPSFIFALYNENQKPGPGTERHFGLLYPNGSHVYEIDLSGNAPEKEYEPLPKPTNN-----EPYKGKIWCVAAKVANTTALSSALSYACSQGNKTCDPIQPGKPCAKPGSLVWKASYAFSSYWSQFRKLGGTCYFNGLATQTIKDPSHGSCKF 516
            +N  +++  ++ +  GTP  P     +++F+L++ENQKPGP  ERHFGL  P+ + VY++ L  +       P P P+ N      P  G  WCVA   AN T L + ++YAC  G   C PIQ G  C  P SL   ASY  ++Y+         C F G    T  DPS+G CK+
Sbjct:  287 FNEGMIRVCSSGK--GTPLMPNRTFETYLFSLFDENQKPGPIAERHFGLFNPDFTPVYDLGLLRDGASVAPTPSPNPSPNPSPKPAPSGGGKWCVAKDGANGTDLQNNINYAC--GFVDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPSYGGCKY 459          
BLAST of CF509637 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 6.275e-26
Identity = 65/172 (37.79%), Postives = 97/172 (56.40%), Query Frame = 1
Query:    1 YNRNIVKKLTAKRAIGTPARPGWVLPSFIFALYNENQKPGPGTERHFGLLYPNGSHVYEIDLSGNAPEKEYEPLPKPTNNEPYKGKIWCVAAKVANTTALSSALSYACSQGNKTCDPIQPGKPCAKPGSLVWKASYAFSSYWSQFRKLGGTCYFNGLATQTIKDPSHGSCKF 516
            YN N+++ +  K   GTP RPG  + ++I+ LYNE+ K G  +E+++GL   NG  VY + L+ +        L   T N+ Y     C A + A+T  L +AL +AC  G   C PI+ G+ C +P ++V  A+YAF +Y+ Q       C FNG+A+ T  DPSHG+C F
Sbjct:  294 YNSNLIRHVLNKT--GTPKRPGIAVSTYIYELYNEDTKAGL-SEKNWGLFNANGEPVYVLRLTNSG-----SVLANDTTNQTY-----CTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTGNNPDACNFNGVASITTTDPSHGTCVF 452          
BLAST of CF509637 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 9.061e-25
Identity = 61/172 (35.47%), Postives = 92/172 (53.49%), Query Frame = 1
Query:    1 YNRNIVKKLTAKRAIGTPARPGWVLPSFIFALYNENQKPGPGTERHFGLLYPNGSHVYEIDLSGNAPEKEYEPLPKPTNNEPYKGKIWCVAAKVANTTALSSALSYACSQGNKTCDPIQPGKPCAKPGSLVWKASYAFSSYWSQFRKLGGTCYFNGLATQTIKDPSHGSCKF 516
            YN N++K +  +   GTP  P      +I+ L+NE+ +  P +E  +GL Y N + VY + +SG+        L   T N+ Y     C+A    +   L +AL +AC  G   C  IQPG+ C +P ++   AS+AF+SY+ +  +  G+C F G+A  T  DPSHGSC F
Sbjct:  197 YNSNLIKHVFDRT--GTPLHPEMTSSVYIYELFNEDLRAPPVSEASWGLFYGNSTPVYLLHVSGSGTF-----LANDTTNQTY-----CIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIF 356          
BLAST of CF509637 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 7.670e-24
Identity = 63/172 (36.63%), Postives = 97/172 (56.40%), Query Frame = 1
Query:    1 YNRNIVKKLTAKRAIGTPARPGWVLPSFIFALYNENQKPGPGTERHFGLLYPNGSHVYEIDLSGNAPEKEYEPLPKPTNNEPYKGKIWCVAAKVANTTALSSALSYACSQGNKTCDPIQPGKPCAKPGSLVWKASYAFSSYWSQFRKLGGTCYFNGLATQTIKDPSHGSCKF 516
            YN N++  L  +  +GTP  PG  + ++IFALY+EN KPGP +ER FGL   + S VY++ L+ ++   +  P  K T++       WCV  K A    L ++L +AC  G   C  IQPG  C +P ++V  A+YA + Y+ +  K    C F+  AT T ++PS+ +C +
Sbjct:  286 YNGNLIAHL--RSMVGTPLMPGKPVDTYIFALYDENLKPGPSSERAFGLFKTDLSMVYDVGLAKSSSSSQ-TPSGKVTSSG------WCVPKKGATNEELQASLDWACGHG-IDCGAIQPGGACFEPNNVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVY 447          
BLAST of CF509637 vs. ExPASy Swiss-Prot
Match: E135_ARATH (Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana GN=At4g31140 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.687e-18
Identity = 62/179 (34.64%), Postives = 92/179 (51.40%), Query Frame = 1
Query:    1 YNRNIVKKLTAKRAIGTPARPGWVLPSFIFALYNENQKP-GPGT-ERHFGLLYPNGSHVYEIDL-SGNAPEKEYEPLPKPTNNEPYKGKIWCVAAKVANTT--ALSSALSYACSQGNKTCDPIQPGKPCAKPGSLVWKASYAFSSYWSQFRKLGGTCYFNGLATQTIKDPSHGSCKFQV 522
            YN+  + +  A +  GTP RPG  + +++F L +E+ K   PG  ERH+G+ Y +G   Y++ L SGN           P  +  Y  K WC+ A  AN     L  ++SYAC   +  C  +  G  C    +L    SYAF+SY+    +L   C F GL+  + +DPS GSCKF++
Sbjct:  286 YNQGFMNRQKANK--GTPMRPG-AMDAYLFGLIDEDAKSIQPGNFERHWGIFYIDGQPKYQLSLGSGNGLI--------PAKDVHYLAKKWCILAPNANLQDPQLGPSVSYACDHAD--CTSLGYGSSCGNL-NLAQNVSYAFNSYYQVSNQLDSACKFPGLSIVSTRDPSVGSCKFKI 450          
The following BLAST results are available for this feature:
BLAST of CF509637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
EA6_ARATH3.772e-5552.33Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
E1312_ARATH2.227e-3134.18Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E1313_ARATH9.355e-3038.24Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E134_ARATH3.009e-2834.88Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E133_ARATH1.493e-2735.47Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E13B_WHEAT4.804e-2636.72Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E132_ARATH6.275e-2637.79Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E131_ARATH9.061e-2535.47Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E137_ARATH7.670e-2436.63Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E135_ARATH3.687e-1834.64Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-145 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-7_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509637 ID=CF509637; Name=CF509637; organism=Citrus sinensis; type=EST; length=570bp
TACAACCGGAATATTGTCAAAAAGCTTACAGCAAAACGGGCCATTGGCAC
CCCGGCCCGACCCGGATGGGTTTTGCCTTCTTTTATCTTTGCTCTGTACA
ACGAGAATCAGAAACCGGGCCCGGGTACGGAGAGGCATTTCGGGCTATTG
TATCCAAACGGGTCGCACGTGTATGAGATTGATTTGAGCGGAAATGCACC
GGAGAAGGAGTACGAGCCGCTGCCGAAGCCGACCAATAACGAGCCGTATA
AGGGGAAGATATGGTGCGTGGCAGCTAAAGTAGCCAACACTACTGCATTG
TCATCGGCTCTTTCTTATGCCTGCTCGCAGGGGAATAAAACCTGTGACCC
GATCCAACCGGGTAAACCTTGTGCTAAACCCGGTTCGTTGGTGTGGAAAG
CAAGTTATGCCTTCAGCTCCTATTGGTCTCAGTTTAGGAAACTTGGTGGG
ACCTGTTACTTCAATGGGCTCGCCACACAGACCATTAAAGATCCAAGTCA
TGGATCCTGCAAGTTCCAAGTGTGACCCTTTGAGATATTATGCCATGGAT
GCTTGGGGATCTACCCCTCA
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