CF509648
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.808e-29 Identity = 66/117 (56.41%), Postives = 77/117 (65.81%), Query Frame = 2 Query: 254 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCXXXXXXXXXXXXXXQDQPLMSSNTSPLTNFPPLS-YDTN---DLSLAFARLQKQNGG---QLGFDDQ 583 L+CPRCDSTNTKFCYYNNYSL+QPRYFCKSCRRYWTKGGTLRN+PVGGGC + P +S+ + + + Y N DLSLAFA L KQ+ G QLGF + Sbjct: 55 LRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHIDLSLAFALLNKQHPGSSSQLGFHSE 171
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF21_ARATH (Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1 PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 6.869e-29 Identity = 68/128 (53.12%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 260 CPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCXXXXXXXXXXXXXXQDQPLMSSNTSPL-----TNFPPLSYDTN---DLSLAFARLQKQN----GGQLGFDDQHDFSILGN 607 CPRC+S NTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGC + ++ +T PL T PP S+ + DL+LAFA LQK + F D SI GN Sbjct: 50 CPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSSSAFSKNNNNKSINFHTDPLQNPLITGMPPSSFGYDHSIDLNLAFATLQKHHLSSQATTPSFGFGGDLSIYGN 177
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.026e-24 Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 2 Query: 254 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGC 403 LKCPRCDS NTKFCYYNNYS+SQPRYFCK+CRRYWT GGTLRNVP+GGGC Sbjct: 60 LKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGC 109
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF56_ARATH (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.026e-24 Identity = 45/49 (91.84%), Postives = 49/49 (100.00%), Query Frame = 2 Query: 257 KCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGC 403 KCPRC+ST+TKFCYYNNYSLSQPRYFCK+CRRYWTKGGTLRN+PVGGGC Sbjct: 74 KCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGC 122
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF57_ARATH (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.287e-24 Identity = 61/121 (50.41%), Postives = 69/121 (57.02%), Query Frame = 2 Query: 254 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCXXXXXXXXXXXXXXQDQPLMSSNTSPLTN----------------FPPLSYDTNDLSLAFARLQKQNGGQL 568 LKCPRC+S NTKFCYYNNYSLSQPR+FCKSCRRYWT+GG LRNVP+GGGC +P S NT P ++ FPP + T D LA L K N QL Sbjct: 41 LKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKSI---------KPNSSMNTLPSSSSSQRFFSSIMEDSSKFFPPPT--TMDFQLAGLSLNKMNDLQL 150
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF32_ARATH (Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.986e-24 Identity = 61/120 (50.83%), Postives = 71/120 (59.17%), Query Frame = 2 Query: 254 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGC-XXXXXXXXXXXXXXQDQPLMSSNTSPLTNFPPLSYDTN---------DLSLAFARLQKQNGG---QLGF 574 L+CPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGG LRN+P+GG +P M+ + +FP S+ N +L LA+A L KQ G LGF Sbjct: 40 LRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRSSSATKSLRTTPEPTMTHDGK---SFPTASFGYNNNNISNEQMELGLAYALLNKQPLGVSSHLGF 156
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF54_ARATH (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.482e-23 Identity = 44/50 (88.00%), Postives = 48/50 (96.00%), Query Frame = 2 Query: 254 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGC 403 LKCPRC+S NTKFCYYNNY+LSQPR+FCK+CRRYWTKGG LRNVPVGGGC Sbjct: 51 LKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGC 100
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.482e-23 Identity = 43/50 (86.00%), Postives = 49/50 (98.00%), Query Frame = 2 Query: 254 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGC 403 LKCPRC+STNTKFCY+NNYSL+QPR+FCK+CRRYWT+GG LRNVPVGGGC Sbjct: 89 LKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGC 138
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF51_ARATH (Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.936e-23 Identity = 43/50 (86.00%), Postives = 49/50 (98.00%), Query Frame = 2 Query: 254 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGC 403 LKCPRCDSTNTKFCY+NNYSL+QPR+FCK+CRRYWT+GG LR+VPVGGGC Sbjct: 95 LKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGC 144
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF31_ARATH (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 1.936e-23 Identity = 45/49 (91.84%), Postives = 47/49 (95.92%), Query Frame = 2 Query: 254 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGG 400 LKCPRCDS NTKFCYYNNY+LSQPR+FCKSCRRYWTKGG LRNVPVGGG Sbjct: 29 LKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGG 77 The following BLAST results are available for this feature:
BLAST of CF509648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509648 ID=CF509648; Name=CF509648; organism=Citrus sinensis; type=EST; length=607bpback to top |