CF509649

Overview
NameCF509649
Unique NameCF509649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length466
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2262 contig Csv1_Contig2262:163..627. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509649 vs. ExPASy Swiss-Prot
Match: NUDT4_ARATH (Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.396e-36
Identity = 78/126 (61.90%), Postives = 98/126 (77.78%), Query Frame = 1
Query:   94 VGNLVSRTGRHLQRYQK-GRRQVVGCIPYRYKCVKQSLD-INEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWP 465
            V +LVSRTGR LQRY   G RQVVGC+PYRYK  KQ ++ +  + ++VL++S+QKGKGMLFPKGGWE DES++EAALRETIEEAGVTG +E E LG+W +KS+ H+  + GYMF LLV  +   WP
Sbjct:   40 VVSLVSRTGRDLQRYDHAGYRQVVGCVPYRYK--KQEVNGVETQVIQVLLVSAQKGKGMLFPKGGWETDESMEEAALRETIEEAGVTGELE-EKLGKWQYKSKRHSIIHDGYMFALLVSQEFERWP 162          
BLAST of CF509649 vs. ExPASy Swiss-Prot
Match: NUD18_ARATH (Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana GN=NUDT18 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 5.306e-36
Identity = 75/121 (61.98%), Postives = 96/121 (79.34%), Query Frame = 1
Query:  103 LVSRTGRHLQRYQKGRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWP 465
            LVSRTGR  QRY KGRRQVVGCIPYR K +     I++E  EVLVISSQKG  ++FPKGGWE+DES++EAA RE++EEAGV G VE + LG+W+F S++  T Y+G+MFP+LV+++L  WP
Sbjct:    4 LVSRTGRQSQRYNKGRRQVVGCIPYRLK-ISSDGTISDE-FEVLVISSQKGHALMFPKGGWELDESVEEAASRESLEEAGVVGNVERQ-LGKWDFLSKSKGTFYEGFMFPMLVKEELELWP 121          
BLAST of CF509649 vs. ExPASy Swiss-Prot
Match: NUD21_ARATH (Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana GN=NUDT21 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.544e-35
Identity = 83/131 (63.36%), Postives = 96/131 (73.28%), Query Frame = 1
Query:   79 PPENVVGNLVSRTGRHLQRYQK-GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWP 465
            P E VV +LVSRTGR LQRY   G RQVVGC+PYRYK           ++EVL+IS+QK GKGML PKGGWEIDESI+EAALRETIEEAGVTG +E E LG+W +KS+ H   + G+MFPLLV  Q   WP
Sbjct:   37 PSEKVV-SLVSRTGRDLQRYNTAGYRQVVGCVPYRYK------KHGGGEIEVLLISAQKKGKGMLLPKGGWEIDESIEEAALRETIEEAGVTGQLE-ESLGKWQYKSKRHTMIHDGHMFPLLVSQQFEIWP 159          
BLAST of CF509649 vs. ExPASy Swiss-Prot
Match: NUD17_ARATH (Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana GN=NUDT17 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.016e-35
Identity = 74/121 (61.16%), Postives = 93/121 (76.86%), Query Frame = 1
Query:  103 LVSRTGRHLQRYQKGRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWP 465
            L SRTGR  QRY KGRRQVVGC+PYR+K       I++E +EVLVISSQKG  ++FPKGGWE+DES++EAA RE +EEAGV G VE + LG+W+F S++  T Y+G MFP+LV +QL  WP
Sbjct:    9 LASRTGRQFQRYNKGRRQVVGCVPYRFKLSNDG-KISDE-VEVLVISSQKGHALMFPKGGWELDESVEEAASRECLEEAGVLGNVEHQ-LGKWDFLSKSRGTYYEGLMFPMLVTEQLELWP 126          
BLAST of CF509649 vs. ExPASy Swiss-Prot
Match: NUD16_ARATH (Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana GN=NUDT16 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.640e-27
Identity = 64/131 (48.85%), Postives = 88/131 (67.18%), Query Frame = 1
Query:  100 NLVSRTGRHLQRYQKGRRQVVGCIPYRYKCVKQSLDINEED---LEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDY------QGYMFPLLVQDQLAEWP 465
            +LV+RTGR  QRY+ G R V GCIP+RY  V    D N E    ++VL+ISS  G G+LFPKGGWE DE+++EAA RE +EEAGV GI+  + LG + FKS++H  ++      +  M+ L V+++LA WP
Sbjct:    3 DLVARTGRLQQRYEDGSRLVAGCIPFRY--VNSDKDGNSESGKVIQVLMISSSSGPGLLFPKGGWENDETVREAAAREAVEEAGVRGIL-MDFLGNYEFKSKSHQDEFSPEGLCKAAMYALYVKEELATWP 130          
BLAST of CF509649 vs. ExPASy Swiss-Prot
Match: NUD13_ARATH (Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana GN=NUDT13 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.356e-23
Identity = 62/136 (45.59%), Postives = 85/136 (62.50%), Query Frame = 1
Query:   94 VGNLVSRTGRHLQRYQKGRRQVVGCIPYRYKCVKQ----SLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTD--------YQGYMFPLLVQDQLAEWP 465
            + NL +RTGR  QRY    R V GCIPYR    ++    S+D  E  L+VL+ISS     ++FPKGGWE DE++ EAA RE +EEAGV GI+  + LG W F+S++ + +         +GYMF L V+++LA WP
Sbjct:    1 MSNLSARTGRDHQRYDNNFRLVSGCIPYRLVKDEEEDSTSVDF-ENKLQVLMISSPNRHDLVFPKGGWEDDETVLEAASREAMEEAGVKGILREDPLGVWEFRSKSSSVEADCCLGGGCKGYMFALEVKEELAIWP 135          
BLAST of CF509649 vs. ExPASy Swiss-Prot
Match: NUD12_ARATH (Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana GN=NUDT12 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.312e-23
Identity = 63/135 (46.67%), Postives = 78/135 (57.78%), Query Frame = 1
Query:  103 LVSRTGRHLQRYQKGRRQVVGCIPYRYKCVKQSLDINEED--------LEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTD------YQGYMFPLLVQDQLAEWP 465
            L SRTGR  QRY    R V GCIPYR        D  EED        LEVL++SS     ++FPKGGWE DE++ EAA RE IEEAGV GI+    LG W F+S++   +       +GYMF L V ++L +WP
Sbjct:    4 LSSRTGRDRQRYDNNFRLVSGCIPYRL----MKADETEEDSGVDFVNKLEVLMVSSPNRHDLVFPKGGWEDDETVLEAASREAIEEAGVKGILRELPLGVWEFRSKSSTVEDECLGGCKGYMFALKVTEELEDWP 134          
The following BLAST results are available for this feature:
BLAST of CF509649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
NUDT4_ARATH1.396e-3661.90Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4... [more]
NUD18_ARATH5.306e-3661.98Nudix hydrolase 18, mitochondrial OS=Arabidopsis t... [more]
NUD21_ARATH1.544e-3563.36Nudix hydrolase 21, chloroplastic OS=Arabidopsis t... [more]
NUD17_ARATH2.016e-3561.16Nudix hydrolase 17, mitochondrial OS=Arabidopsis t... [more]
NUD16_ARATH2.640e-2748.85Nudix hydrolase 16, mitochondrial OS=Arabidopsis t... [more]
NUD13_ARATH1.356e-2345.59Nudix hydrolase 13, mitochondrial OS=Arabidopsis t... [more]
NUD12_ARATH2.312e-2346.67Nudix hydrolase 12, mitochondrial OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-157 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-7_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509649 ID=CF509649; Name=CF509649; organism=Citrus sinensis; type=EST; length=466bp
CTGCTGCGAATATTCCGTAACTAGAGAAGAAAACTATGGTGGCTTTGGTA
GCTCAAGAAACTATTGTATCTCTTGTAACCTCCTGAAAATGTTGTGGGCA
ATTTGGTTTCTCGCACCGGCAGGCATTTGCAGCGTTACCAAAAAGGCCGT
CGCCAAGTTGTTGGATGCATACCATATAGATATAAATGCGTAAAACAAAG
CTTGGATATTAATGAGGAGGATCTTGAAGTTCTCGTCATCAGTTCACAGA
AAGGCAAAGGGATGTTGTTCCCAAAGGGAGGCTGGGAAATTGATGAATCC
ATACAAGAAGCAGCTTTACGAGAAACCATCGAGGAAGCCGGGGTAACTGG
CATCGTTGAGTGTGAATTATTGGGTGAATGGAATTTCAAGAGCAGAGCAC
ACAACACTGACTATCAAGGATACATGTTCCCATTACTTGTTCAGGATCAA
TTAGCGGAGTGGCCAG
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