CF509650

Overview
NameCF509650
Unique NameCF509650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length528
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF509650_ssr475 microsatellite CF509650_ssr475:475..486. BLAST: Citrus ESTs to Prunus persica proteins V1
CF509650_ssr1 microsatellite CF509650_ssr1:1..12. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig898 contig Csv1_Contig898:1..528. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF509650 vs. ExPASy Swiss-Prot
Match: ARG7_PHAAU (Indole-3-acetic acid-induced protein ARG7 OS=Phaseolus aureus GN=ARG7 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.989e-18
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 2 
Query:  185 LDVPKGHFVVYVGENRSRYIIPITFLTRPEFQSLLQQAEEEFGFDHDM-GLTIPCEEQVFQSLTSML 382
            LD PKG+  VYVGEN  R++IP++ L +P FQ LL QAEEEFG+DH M GLTIPC E +FQ +TS L
Sbjct:   23 LDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCL 89
[Close]
BLAST of CF509650 vs. ExPASy Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.210e-18
Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 2 
Query:  188 DVPKGHFVVYVGENRSRYIIPITFLTRPEFQSLLQQAEEEFGFDHDM-GLTIPCEEQVFQSLTSML 382
            D PKG+  VYVGE   R++IP+++L +P FQ LL QAEEEFG+DH M GLTIPC E VFQ +TS L
Sbjct:   16 DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCL 81
[Close]
BLAST of CF509650 vs. ExPASy Swiss-Prot
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.516e-17
Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 2 
Query:  185 LDVPKGHFVVYVGENRSRYIIPITFLTRPEFQSLLQQAEEEFGFDHDM-GLTIPCEEQVFQSLTSML 382
            +D PKG+  VYVGE   R++IP++++ +P FQ LL QAEEEFG+DH M GLTIPC E+VFQ +T  L
Sbjct:   15 VDAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRITCCL 81
[Close]
BLAST of CF509650 vs. ExPASy Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.826e-17
Identity = 39/67 (58.21%), Postives = 53/67 (79.10%), Query Frame = 2 
Query:  185 LDVPKGHFVVYVGENRSRYIIPITFLTRPEFQSLLQQAEEEFGFDHDM-GLTIPCEEQVFQSLTSML 382
            ++VPKG+ VVYVG+   R++IP+++L +P FQ LL QAEEEFG+DH M GLTIPC+E  F ++TS L
Sbjct:   23 VEVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHL 89
[Close]
BLAST of CF509650 vs. ExPASy Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.189e-16
Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = 2 
Query:  185 LDVPKGHFVVYVGENRSRYIIPITFLTRPEFQSLLQQAEEEFGFDH-DMGLTIPCEEQVFQSLTSML 382
            +DV KG+  VYVGE   R++IP+++L +P FQ LL QAEEEFG+ H + GLTIPC E VFQ +TS L
Sbjct:   23 VDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFL 89
[Close]
BLAST of CF509650 vs. ExPASy Swiss-Prot
Match: A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.369e-16
Identity = 38/67 (56.72%), Postives = 51/67 (76.12%), Query Frame = 2 
Query:  185 LDVPKGHFVVYVGENRSRYIIPITFLTRPEFQSLLQQAEEEFGFDHDM-GLTIPCEEQVFQSLTSML 382
            +DVPKG+  VYVG+   R+ IP+++L  P FQ LL QAEEEFG+DH M GLTIPC+E+ F ++T+ L
Sbjct:   24 VDVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHL 90
The following BLAST results are available for this feature:
BLAST of CF509650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ARG7_PHAAU3.989e-1862.69Indole-3-acetic acid-induced protein ARG7 OS=Phase... [more]
AX15A_SOYBN5.210e-1862.12Auxin-induced protein 15A OS=Glycine max PE=2 SV=1[more]
AXX15_SOYBN1.516e-1758.21Auxin-induced protein X15 OS=Glycine max PE=2 SV=1[more]
AX10A_SOYBN9.826e-1758.21Auxin-induced protein X10A OS=Glycine max PE=2 SV=... [more]
AX6B_SOYBN2.189e-1658.21Auxin-induced protein 6B OS=Glycine max PE=2 SV=1[more]
A10A5_SOYBN6.369e-1656.72Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-158 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-7_G06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509650 ID=CF509650; Name=CF509650; organism=Citrus sinensis; type=EST; length=528bp
GAAAGAAAGAAACTTCTCTCAGAGCTCTTCTTCTCTATTGTCATTAATTA
CCCGCACAAGTTCTTCATTAGGATGGCCATCAGAAAATCAAACAAGTTGT
CTCAAACGGCGTGTGATTAAGCAAATTCTCAAGAGATGCTCGAGCTTGGG
GAAGAAACAAAGCTACGATGAACAAGGACTCCCTTTAGATGTCCCAAAAG
GTCATTTTGTTGTGTATGTTGGTGAAAACAGAAGCAGATACATCATCCCA
ATAACTTTCTTGACTCGTCCTGAGTTTCAAAGCCTGCTTCAACAAGCCGA
AGAAGAATTTGGCTTTGATCATGACATGGGCTTAACCATTCCATGTGAAG
AACAAGTGTTCCAGTCCTTAACATCAATGCTCAGATAAGAAGAATATTGC
CGAGCTACGCTGCTAGGGTACTTGCTTGTTTGTTTTTGGAGAAATTGGCT
GATGATGAAGCTGCTTCAATTGCTTCTCTCTCTCTCTTTTTTTCCTTTTT
TCTTTTTCTTTTACAGGAAATCTAACCC
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