CF509651

Overview
NameCF509651
Unique NameCF509651
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length183
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2830 contig Csv1_Contig2830:808..990. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: HSP7S_SPIOL (Stromal 70 kDa heat shock-related protein, chloroplastic (Fragment) OS=Spinacia oleracea GN=CHSP70 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.061e-25
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQRTATKDAGRIAGL+VLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF
Sbjct:   89 PAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 145          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: HSP7S_PEA (Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.363e-25
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQRTATKDAGRIAGL+VLRIINEPTAASLAYGFE+KNNETILVFDLGGGTF
Sbjct:  209 PAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTF 265          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_GUITH (Chaperone protein dnaK OS=Guillardia theta GN=dnaK PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 5.821e-24
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAGRIAGL+VLRIINEPTAASLAYG +KKNNETILVFDLGGGTF
Sbjct:  143 PAYFNDSQRQATKDAGRIAGLEVLRIINEPTAASLAYGLDKKNNETILVFDLGGGTF 199          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_GRATL (Chaperone protein dnaK OS=Gracilaria tenuistipitata var. liui GN=dnaK PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.297e-23
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGLDVLRIINEPTAASL+YG +KKNNETILVFDLGGGTF
Sbjct:  143 PAYFNDSQRQATKDAGQIAGLDVLRIINEPTAASLSYGLDKKNNETILVFDLGGGTF 199          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_CYACA (Chaperone protein dnaK OS=Cyanidium caldarium GN=dnaK PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.212e-23
Identity = 52/57 (91.23%), Postives = 54/57 (94.74%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGLDVLRIINEPTAASLAYG +KKNNE ILVFDLGGGTF
Sbjct:  143 PAYFNDSQRQATKDAGKIAGLDVLRIINEPTAASLAYGLDKKNNEKILVFDLGGGTF 199          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_PORYE (Chaperone protein dnaK OS=Porphyra yezoensis GN=dnaK PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.889e-23
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGLDVLRIINEPTAASL+YG +K+NNETILVFDLGGGTF
Sbjct:  142 PAYFNDSQRQATKDAGKIAGLDVLRIINEPTAASLSYGLDKQNNETILVFDLGGGTF 198          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_PORUM (Chaperone protein dnaK OS=Porphyra umbilicalis GN=dnaK PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.889e-23
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGLDVLRIINEPTAASL+YG +K+NNETILVFDLGGGTF
Sbjct:  141 PAYFNDSQRQATKDAGKIAGLDVLRIINEPTAASLSYGLDKQNNETILVFDLGGGTF 197          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_PORPU (Chaperone protein dnaK OS=Porphyra purpurea GN=dnaK PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.889e-23
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGLDVLRIINEPTAASL+YG +K+NNETILVFDLGGGTF
Sbjct:  141 PAYFNDSQRQATKDAGKIAGLDVLRIINEPTAASLSYGLDKQNNETILVFDLGGGTF 197          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK2_ANASP (Chaperone protein dnaK2 OS=Anabaena sp. (strain PCC 7120) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.889e-23
Identity = 50/57 (87.72%), Postives = 56/57 (98.25%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAG++V+RIINEPTAASLAYGF+KK+NETILVFDLGGGTF
Sbjct:  142 PAYFNDSQRQATKDAGKIAGIEVMRIINEPTAASLAYGFDKKSNETILVFDLGGGTF 198          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_PAVLU (Chaperone protein dnaK OS=Pavlova lutherii GN=dnaK PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.928e-23
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +KK+NETILVFDLGGGTF
Sbjct:  142 PAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKKDNETILVFDLGGGTF 198          
The following BLAST results are available for this feature:
BLAST of CF509651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7S_SPIOL1.061e-2598.25Stromal 70 kDa heat shock-related protein, chlorop... [more]
HSP7S_PEA2.363e-2596.49Stromal 70 kDa heat shock-related protein, chlorop... [more]
DNAK_GUITH5.821e-2492.98Chaperone protein dnaK OS=Guillardia theta GN=dnaK... [more]
DNAK_GRATL1.297e-2391.23Chaperone protein dnaK OS=Gracilaria tenuistipitat... [more]
DNAK_CYACA2.212e-2391.23Chaperone protein dnaK OS=Cyanidium caldarium GN=d... [more]
DNAK_PORYE2.889e-2389.47Chaperone protein dnaK OS=Porphyra yezoensis GN=dn... [more]
DNAK_PORUM2.889e-2389.47Chaperone protein dnaK OS=Porphyra umbilicalis GN=... [more]
DNAK_PORPU2.889e-2389.47Chaperone protein dnaK OS=Porphyra purpurea GN=dna... [more]
DNAK2_ANASP2.889e-2387.72Chaperone protein dnaK2 OS=Anabaena sp. (strain PC... [more]
DNAK_PAVLU4.928e-2389.47Chaperone protein dnaK OS=Pavlova lutherii GN=dnaK... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-159 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-7_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509651 ID=CF509651; Name=CF509651; organism=Citrus sinensis; type=EST; length=183bp
TGCCTGCTTACTTCAATGATTCCCAGAGAACAGCAACAAAGGATGCTGGT
CGAATTGCTGGCTTAGATGTTCTGCGTATAATTAATGAGCCTACTGCTGC
TTCGTTGGCATATGGATTTGAAAAGAAAAACAACGAGACCATCCTAGTGT
TTGACCTTGGTGGTGGTACCTTCTTGATGTTTC
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