CF509654

Overview
NameCF509654
Unique NameCF509654
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length475
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1329 contig Csv1_Contig1329:36..511. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF509654 vs. ExPASy Swiss-Prot
Match: PEAM1_ARATH (Phosphoethanolamine N-methyltransferase 1 OS=Arabidopsis thaliana GN=NMT1 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.532e-41
Identity = 80/100 (80.00%), Postives = 94/100 (94.00%), Query Frame = 1 
Query:  175 VAMAGQGEREIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFEN 474
            +A + + ER+IQKNYW+EHSA+LTVEAMMLDS+ASDLDKEERPEVLSLLPPYEGK+VLE GAGIGRFTGELA+KAG +IALDFID+VIKKNE +NGH++N
Sbjct:    1 MAASYEEERDIQKNYWIEHSADLTVEAMMLDSRASDLDKEERPEVLSLLPPYEGKSVLELGAGIGRFTGELAQKAGELIALDFIDNVIKKNESINGHYKN 100
[Close]
BLAST of CF509654 vs. ExPASy Swiss-Prot
Match: PEAM3_ARATH (Putative phosphoethanolamine N-methyltransferase 3 OS=Arabidopsis thaliana GN=NMT3 PE=2 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 1.585e-38
Identity = 78/99 (78.79%), Postives = 87/99 (87.88%), Query Frame = 1 
Query:  181 MAGQGE-REIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFEN 474
            MA  GE REIQKNYW EHS  L+VEAMMLDSKASDLDKEERPE+L+ LPP EG TVLEFGAGIGRFT ELA+KAG VIA+DFI+SVIKKNE +NGH++N
Sbjct:    1 MASYGEEREIQKNYWKEHSVGLSVEAMMLDSKASDLDKEERPEILAFLPPIEGTTVLEFGAGIGRFTTELAQKAGQVIAVDFIESVIKKNENINGHYKN 99
[Close]
BLAST of CF509654 vs. ExPASy Swiss-Prot
Match: PEAMT_SPIOL (Phosphoethanolamine N-methyltransferase OS=Spinacia oleracea GN=PEAMT PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 4.612e-38
Identity = 76/99 (76.77%), Postives = 87/99 (87.88%), Query Frame = 1 
Query:  178 AMAGQGEREIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFEN 474
            AM    ERE+ K YW+EHS +LTVEAMMLDS+ASDLDK ERPEVLS+LPPYEGK+VLE GAGIGRFTGELA+KA  VIALDFI+SVIKKNE +NGH++N
Sbjct:    5 AMGVLQEREVFKKYWIEHSVDLTVEAMMLDSQASDLDKVERPEVLSMLPPYEGKSVLELGAGIGRFTGELAEKASQVIALDFIESVIKKNESINGHYKN 103
[Close]
BLAST of CF509654 vs. ExPASy Swiss-Prot
Match: PEAM2_ARATH (Putative phosphoethanolamine N-methyltransferase 2 OS=Arabidopsis thaliana GN=NMT2 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 3.654e-35
Identity = 71/84 (84.52%), Postives = 80/84 (95.24%), Query Frame = 1 
Query:  223 MEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFEN 474
            MEHS++LTVEAMMLDSKASDLDKEERPEVLSL+PPYEGK+VLE GAGIGRFTGELA+KAG VIALDFI+S I+KNE VNGH++N
Sbjct:    1 MEHSSDLTVEAMMLDSKASDLDKEERPEVLSLIPPYEGKSVLELGAGIGRFTGELAQKAGEVIALDFIESAIQKNESVNGHYKN 84
The following BLAST results are available for this feature:
BLAST of CF509654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PEAM1_ARATH1.532e-4180.00Phosphoethanolamine N-methyltransferase 1 OS=Arabi... [more]
PEAM3_ARATH1.585e-3878.79Putative phosphoethanolamine N-methyltransferase 3... [more]
PEAMT_SPIOL4.612e-3876.77Phosphoethanolamine N-methyltransferase OS=Spinaci... [more]
PEAM2_ARATH3.654e-3584.52Putative phosphoethanolamine N-methyltransferase 2... [more]
back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-162 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-7_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509654 ID=CF509654; Name=CF509654; organism=Citrus sinensis; type=EST; length=475bp
GTCGTTTTGGTCATGCAGCAAAGAGGGAGAGCTAATAACCGTAGATCCAG
GAGCTTTTCTAGATCTAGACTAGCCATTGAGGGGTTTTAGCCTTGAATTT
TTGTTTATTTTTTGCATTAGATCTTTAAAAAAAAAATTTAAAAAGCCGAG
AAGAATTTGCGTATTTTGCAGTCCGTTGCAATGGCTGGTCAAGGTGAACG
TGAGATCCAAAAGAACTACTGGATGGAACACTCGGCGAATTTAACAGTGG
AGGCTATGATGCTCGACTCCAAAGCCTCTGATCTCGACAAAGAAGAGCGT
CCTGAAGTGCTTTCTCTACTTCCACCATATGAAGGAAAAACAGTTCTGGA
ATTTGGAGCTGGAATCGGTAGATTTACCGGTGAACTAGCTAAGAAGGCTG
GTCATGTTATAGCCCTGGACTTTATTGACAGTGTCATCAAGAAGAATGAA
GAAGTGAATGGGCATTTTGAGAATG
back to top