CF509659

Overview
NameCF509659
Unique NameCF509659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length499
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509659 vs. ExPASy Swiss-Prot
Match: RL3_ASPFU (60S ribosomal protein L3 OS=Aspergillus fumigatus GN=rpl3 PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.453e-65
Identity = 72/97 (74.23%), Postives = 80/97 (82.47%), Query Frame = 3
Query:    3 KAGMTTIVRDLDRPGAKLHKKEIVEAATVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWXXXXXXXXXXXXXXHSEEGGKNIT 293
            KAGMTT+VRDLDRPGAK+HKKEIVEA T+IETPP++AVG+VGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNW              H+EE G +IT
Sbjct:   50 KAGMTTVVRDLDRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYAKKHAEENGASIT 146          

HSP 2 Score: 116.316 bits (290), Expect = 2.453e-65
Identity = 53/68 (77.94%), Postives = 64/68 (94.12%), Query Frame = 1
Query:  295 RELERMKKYCTVVRVLAHSQITKTPIRQKKAHLMEVQINGGSVADKVEFGQGLFEKPIEVSSIFEQNE 498
            RELER+KKYCTVVRVLAH+QI KTP++QKKAHLME+Q+NGGSVADKV+F + LFEKPIE+ SIFE++E
Sbjct:  147 RELERIKKYCTVVRVLAHTQIRKTPLKQKKAHLMEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDE 214          
BLAST of CF509659 vs. ExPASy Swiss-Prot
Match: RL3_NEUCR (60S ribosomal protein L3 OS=Neurospora crassa GN=rpl-3 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.170e-65
Identity = 72/97 (74.23%), Postives = 76/97 (78.35%), Query Frame = 3
Query:    3 KAGMTTIVRDLDRPGAKLHKKEIVEAATVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWXXXXXXXXXXXXXXHSEEGGKNIT 293
            KAGMTTIVRDLDRPGAK HKKE+VEA T+I+TPPMI VGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNW              HS+  G  IT
Sbjct:   50 KAGMTTIVRDLDRPGAKAHKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYVKKHSDNNGAAIT 146          

HSP 2 Score: 119.783 bits (299), Expect = 4.170e-65
Identity = 55/68 (80.88%), Postives = 64/68 (94.12%), Query Frame = 1
Query:  295 RELERMKKYCTVVRVLAHSQITKTPIRQKKAHLMEVQINGGSVADKVEFGQGLFEKPIEVSSIFEQNE 498
            RELER+KKYCTVVRVLAH+QI KTP++QKKAHLME+QINGGSVADKVEFG GLFEKP+ + SIFE++E
Sbjct:  147 RELERIKKYCTVVRVLAHTQIRKTPLKQKKAHLMEIQINGGSVADKVEFGHGLFEKPVSIDSIFEKDE 214          
BLAST of CF509659 vs. ExPASy Swiss-Prot
Match: RL3A_SCHPO (60S ribosomal protein L3-A OS=Schizosaccharomyces pombe GN=rpl3a PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 7.586e-58
Identity = 62/73 (84.93%), Postives = 70/73 (95.89%), Query Frame = 3
Query:    3 KAGMTTIVRDLDRPGAKLHKKEIVEAATVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNW 221
            KAGMT IVRDLDRPG+K+HK+EI+EA TVIETPPM+ VG+VGY+ETPRGLRSLTTVWAEHLS+EVKRRFYKNW
Sbjct:   50 KAGMTHIVRDLDRPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKNW 122          

HSP 2 Score: 106.686 bits (265), Expect = 7.586e-58
Identity = 49/69 (71.01%), Postives = 61/69 (88.41%), Query Frame = 1
Query:  292 HRELERMKKYCTVVRVLAHSQITKTPIRQKKAHLMEVQINGGSVADKVEFGQGLFEKPIEVSSIFEQNE 498
            +RELER+KKYC+VVRVLAH+QI KTP+ QKKAHLME+Q+NGGSVADKVE+ +  FEK +++ S FEQNE
Sbjct:  145 NRELERIKKYCSVVRVLAHTQIRKTPLAQKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNE 213          
BLAST of CF509659 vs. ExPASy Swiss-Prot
Match: RL3B_SCHPO (60S ribosomal protein L3-B OS=Schizosaccharomyces pombe GN=rpl3b PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 9.890e-58
Identity = 61/73 (83.56%), Postives = 70/73 (95.89%), Query Frame = 3
Query:    3 KAGMTTIVRDLDRPGAKLHKKEIVEAATVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNW 221
            KAGMT IVRDLDRPG+K+HK+EI+EA T+IETPPM+ VG+VGY+ETPRGLRSLTTVWAEHLS+EVKRRFYKNW
Sbjct:   50 KAGMTHIVRDLDRPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKNW 122          

HSP 2 Score: 106.686 bits (265), Expect = 9.890e-58
Identity = 49/69 (71.01%), Postives = 61/69 (88.41%), Query Frame = 1
Query:  292 HRELERMKKYCTVVRVLAHSQITKTPIRQKKAHLMEVQINGGSVADKVEFGQGLFEKPIEVSSIFEQNE 498
            +RELER+KKYC+VVRVLAH+QI KTP+ QKKAHLME+Q+NGGSVADKVE+ +  FEK +++ S FEQNE
Sbjct:  145 NRELERIKKYCSVVRVLAHTQIRKTPLAQKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNE 213          
BLAST of CF509659 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.660e-54
Identity = 62/73 (84.93%), Postives = 70/73 (95.89%), Query Frame = 3
Query:    3 KAGMTTIVRDLDRPGAKLHKKEIVEAATVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNW 221
            KAGMTTIVRDLDRPG+K HK+EIVEA +V++TPPM+ VG+VGYIETPRGLRSLTTVWAEHLSDE+KRRFYKNW
Sbjct:   50 KAGMTTIVRDLDRPGSKFHKREIVEAVSVVDTPPMVVVGVVGYIETPRGLRSLTTVWAEHLSDEIKRRFYKNW 122          

HSP 2 Score: 93.9745 bits (232), Expect = 1.660e-54
Identity = 43/68 (63.24%), Postives = 57/68 (83.82%), Query Frame = 1
Query:  295 RELERMKKYCTVVRVLAHSQITKTPIRQKKAHLMEVQINGGSVADKVEFGQGLFEKPIEVSSIFEQNE 498
            REL R+KKY +VVRVLAH+Q+ KTP+ QKKAHL E+Q+NGGSV++KV++ +  FEK + V S+FEQNE
Sbjct:  147 RELARIKKYASVVRVLAHTQVRKTPLVQKKAHLAEIQLNGGSVSEKVDWAREHFEKTVSVDSVFEQNE 214          
BLAST of CF509659 vs. ExPASy Swiss-Prot
Match: RL3_CANGA (60S ribosomal protein L3 OS=Candida glabrata GN=RPL3 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.164e-54
Identity = 62/73 (84.93%), Postives = 70/73 (95.89%), Query Frame = 3
Query:    3 KAGMTTIVRDLDRPGAKLHKKEIVEAATVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNW 221
            KAGMTTIVRDLDRPG+K HK+EIVEA TV++TPP++ VG+VGY+ETPRGLRSLTTVWAEHLSDEVKRRFYKNW
Sbjct:   50 KAGMTTIVRDLDRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNW 122          

HSP 2 Score: 93.5893 bits (231), Expect = 2.164e-54
Identity = 42/68 (61.76%), Postives = 56/68 (82.35%), Query Frame = 1
Query:  295 RELERMKKYCTVVRVLAHSQITKTPIRQKKAHLMEVQINGGSVADKVEFGQGLFEKPIEVSSIFEQNE 498
            REL R+KKY TVVRVL H+Q+ KTP+ QKKAHL E+Q+NGGS+++KV++ +  FEK + V S+FEQNE
Sbjct:  146 RELARIKKYATVVRVLVHTQVRKTPLVQKKAHLAEIQLNGGSISEKVDWAREHFEKTVSVDSVFEQNE 213          
BLAST of CF509659 vs. ExPASy Swiss-Prot
Match: RL3_DEBHA (60S ribosomal protein L3 OS=Debaryomyces hansenii GN=RPL3 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.821e-54
Identity = 60/73 (82.19%), Postives = 72/73 (98.63%), Query Frame = 3
Query:    3 KAGMTTIVRDLDRPGAKLHKKEIVEAATVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNW 221
            KAGMTT+VRDLDRPG+K+HK+EIVEAATV++TPP++ VG+VGY+ETPRGLRSLTTVWAEHLS+EV+RRFYKNW
Sbjct:   50 KAGMTTVVRDLDRPGSKMHKREIVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYKNW 122          

HSP 2 Score: 93.5893 bits (231), Expect = 2.821e-54
Identity = 43/68 (63.24%), Postives = 57/68 (83.82%), Query Frame = 1
Query:  295 RELERMKKYCTVVRVLAHSQITKTPIRQKKAHLMEVQINGGSVADKVEFGQGLFEKPIEVSSIFEQNE 498
            REL R+KKY +VVRVLAH+QI KTP+ QKKAHL E+Q+NGGSV+DKV++ +  FEK + V S+FE++E
Sbjct:  146 RELARIKKYASVVRVLAHTQIKKTPLAQKKAHLAEIQVNGGSVSDKVDWAKEHFEKTVSVDSVFEKDE 213          
BLAST of CF509659 vs. ExPASy Swiss-Prot
Match: RL3_KLULA (60S ribosomal protein L3 OS=Kluyveromyces lactis GN=RPL3 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.677e-54
Identity = 62/94 (65.96%), Postives = 75/94 (79.79%), Query Frame = 3
Query:    3 KAGMTTIVRDLDRPGAKLHKKEIVEAATVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWXXXXXXXXXXXXXXHSEEGGK 284
            KAGM+TIVRDLDRPG+K HK+E+VEA TV++TPP++ VG+VGY+ETPRGLRSLTTVWAEHLSDEVKRRFYKNW              ++E G +
Sbjct:   50 KAGMSTIVRDLDRPGSKFHKREVVEAVTVVDTPPIVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYSAKYAENGAQ 143          

HSP 2 Score: 94.3597 bits (233), Expect = 3.677e-54
Identity = 43/68 (63.24%), Postives = 56/68 (82.35%), Query Frame = 1
Query:  295 RELERMKKYCTVVRVLAHSQITKTPIRQKKAHLMEVQINGGSVADKVEFGQGLFEKPIEVSSIFEQNE 498
            REL R+KKY +VVRVL H+Q+ KTP+ QKKAHL E+Q+NGGSV+DKV++ +  FEK + V S+FEQNE
Sbjct:  146 RELARIKKYASVVRVLVHTQVRKTPLSQKKAHLAEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNE 213          
BLAST of CF509659 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4)

HSP 1 Score: 138.272 bits (347), Expect = 4.794e-54
Identity = 61/73 (83.56%), Postives = 70/73 (95.89%), Query Frame = 3
Query:    3 KAGMTTIVRDLDRPGAKLHKKEIVEAATVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNW 221
            KAGMTTIVRDLDRPG+K HK+E+VEA TV++TPP++ VG+VGY+ETPRGLRSLTTVWAEHLSDEVKRRFYKNW
Sbjct:   50 KAGMTTIVRDLDRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNW 122          

HSP 2 Score: 92.8189 bits (229), Expect = 4.794e-54
Identity = 42/68 (61.76%), Postives = 56/68 (82.35%), Query Frame = 1
Query:  295 RELERMKKYCTVVRVLAHSQITKTPIRQKKAHLMEVQINGGSVADKVEFGQGLFEKPIEVSSIFEQNE 498
            REL R+KKY +VVRVL H+QI KTP+ QKKAHL E+Q+NGGS+++KV++ +  FEK + V S+FEQNE
Sbjct:  146 RELARIKKYASVVRVLVHTQIRKTPLAQKKAHLAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNE 213          
BLAST of CF509659 vs. ExPASy Swiss-Prot
Match: RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4)

HSP 1 Score: 129.028 bits (323), Expect = 9.459e-49
Identity = 61/100 (61.00%), Postives = 77/100 (77.00%), Query Frame = 3
Query:    3 KAGMTTIVRDLDRPGAKLHKKEIVEAATVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWXXXXXXXXXXXXXXH-SEEGGKNITSR 299
            KAGMT IVRD+++PG+KLHKKE  EA T+IETPPM+ VG+VGY++TPRGLRSL TVWA+HLS+E++RRFYKNW              H +EEG K+I S+
Sbjct:   50 KAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYKNWAKSKKKAFTRYSKKHETEEGKKDIQSQ 149          

HSP 2 Score: 84.3445 bits (207), Expect = 9.459e-49
Identity = 39/68 (57.35%), Postives = 55/68 (80.88%), Query Frame = 1
Query:  298 ELERMKKYCTVVRVLAHSQITKTP-IRQKKAHLMEVQINGGSVADKVEFGQGLFEKPIEVSSIFEQNE 498
            +LE+MKKYC+V+RVLAH+QI K   ++QKKAHL E+QINGG +A KV++   LFEK + V +IF+++E
Sbjct:  149 QLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAHLNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDE 216          
The following BLAST results are available for this feature:
BLAST of CF509659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
RL3_ASPFU2.453e-6574.2360S ribosomal protein L3 OS=Aspergillus fumigatus ... [more]
RL3_NEUCR4.170e-6574.2360S ribosomal protein L3 OS=Neurospora crassa GN=r... [more]
RL3A_SCHPO7.586e-5884.9360S ribosomal protein L3-A OS=Schizosaccharomyces ... [more]
RL3B_SCHPO9.890e-5883.5660S ribosomal protein L3-B OS=Schizosaccharomyces ... [more]
RL3_ASHGO1.660e-5484.9360S ribosomal protein L3 OS=Ashbya gossypii GN=RPL... [more]
RL3_CANGA2.164e-5484.9360S ribosomal protein L3 OS=Candida glabrata GN=RP... [more]
RL3_DEBHA2.821e-5482.1960S ribosomal protein L3 OS=Debaryomyces hansenii ... [more]
RL3_KLULA3.677e-5465.9660S ribosomal protein L3 OS=Kluyveromyces lactis G... [more]
RL3_YEAST4.794e-5483.5660S ribosomal protein L3 OS=Saccharomyces cerevisi... [more]
RL32_ARATH9.459e-4961.0060S ribosomal protein L3-2 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-167 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-7_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509659 ID=CF509659; Name=CF509659; organism=Citrus sinensis; type=EST; length=499bp
ACAAGGCCGGCATGACCACCATCGTCCGTGACCTGGACCGCCCTGGTGCC
AAGTTGCACAAGAAGGAGATCGTCGAGGCCGCTACGGTCATCGAAACTCC
TCCGATGATCGCCGTTGGCTTGGTTGGCTACATCGAGACTCCCCGTGGAC
TCCGCTCGTTGACCACTGTGTGGGCTGAGCACCTTTCCGACGAGGTCAAG
CGTCGCTTCTACAAGAACTGGTACAAGAGCAAGAAAAAGGCCTTCACCAA
GTACGCCAAGAAGCACTCCGAGGAGGGTGGCAAGAACATCACATCGCGAG
CTCGAGCGCATGAAGAAGTACTGCACCGTCGTCCGTGTCCTCGCCCACTC
CCAGATCACCAAGACCCCCATCCGCCAGAAGAAGGCCCACCTTATGGAGG
TCCAGATCAACGGTGGCTCCGTCGCCGACAAGGTCGAGTTCGGCCAGGGT
CTCTTCGAGAAGCCCATCGAGGTGTCCAGCATCTTCGAGCAGAACGAGA
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