CF509696

Overview
NameCF509696
Unique NameCF509696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length483
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7528 contig Csv1_Contig7528:92..574. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509696 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 1.602e-54
Identity = 104/134 (77.61%), Postives = 109/134 (81.34%), Query Frame = 3
Query:   81 VAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGV 482
            V +  S+S KDY DPPPEPLFDA EL KWSFYRALIAEFIA            IGYKSQTDPA N D C GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGL LARKV+LVRAVMYMVAQCLGAI GV
Sbjct:    6 VGDKRSFSGKDYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGV 139          
BLAST of CF509696 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 2.394e-50
Identity = 101/145 (69.66%), Postives = 110/145 (75.86%), Query Frame = 3
Query:   63 MAKD---TGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVD--GCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGV 482
            MAKD      AE G Y AKDY+DPPP PL DA ELTKWS YRA+IAEF+A            IGYK Q+DP  N     C+GVGILGIAWAFGGMIF+LVYCTAG+SGGHINPAVTFGLFLARKVSLVRAV+Y+VAQ LGAI GV
Sbjct:    1 MAKDIEAAAAAEGGEYMAKDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGV 145          
BLAST of CF509696 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 3.127e-50
Identity = 100/144 (69.44%), Postives = 109/144 (75.69%), Query Frame = 3
Query:   63 MAKD--TGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVD--GCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGV 482
            MAKD      E G +SAKDYTDPPP PL D  ELTKWS YRA+IAEFIA            IGYK Q+D   N     C+GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RAV+Y++AQCLGAI GV
Sbjct:    1 MAKDIEASAPEGGEFSAKDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGV 144          
BLAST of CF509696 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.188e-49
Identity = 98/134 (73.13%), Postives = 106/134 (79.10%), Query Frame = 3
Query:   87 EHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVD--GCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGV 482
            E G +SAKDYTDPPP PL DA ELTKWS YRA+IAEFIA            IGYK QTD A +     C GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSLVRA++Y++AQCLGAI GV
Sbjct:   12 EAGEFSAKDYTDPPPAPLIDADELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGV 145          
BLAST of CF509696 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.552e-49
Identity = 100/144 (69.44%), Postives = 111/144 (77.08%), Query Frame = 3
Query:   63 MAKDTGVA--EHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVD--GCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGV 482
            MAKD   +  E G +SAKDYTDPPP PL DA ELT+WS YRA+IAEFIA            IGYK QTD + +     C GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSLVRA++Y++AQCLGAI GV
Sbjct:    1 MAKDIEASGPEAGEFSAKDYTDPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGV 144          
BLAST of CF509696 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.716e-48
Identity = 100/147 (68.03%), Postives = 109/147 (74.15%), Query Frame = 3
Query:   63 MAKDTGV---AEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDG----CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGV 482
            M KD  V   A  G ++AKDYTDPPP PL DA EL  WS YRA+IAEFIA            IGYK QTD + +  G    C GVG+LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRA++YMVAQCLGA+ GV
Sbjct:    1 MGKDDVVQSGAGGGEFAAKDYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGV 147          
BLAST of CF509696 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 3.822e-48
Identity = 96/140 (68.57%), Postives = 104/140 (74.29%), Query Frame = 3
Query:   63 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGV 482
            MAKD  V     +  +DY DPPP P FDA ELTKWS YRA+IAEF+A            IGYK Q+D       C GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RAV+YMVAQCLGAI GV
Sbjct:    1 MAKD--VEGPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGV 138          
BLAST of CF509696 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 3.822e-48
Identity = 96/140 (68.57%), Postives = 104/140 (74.29%), Query Frame = 3
Query:   63 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGV 482
            MAKD    E   +  +DY DPPP P FDA ELTKWS YRA+IAEF+A            IGYK Q+D       C GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RAV+YMVAQCLGAI GV
Sbjct:    1 MAKDVEGPE--GFQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGV 138          
BLAST of CF509696 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 4.992e-48
Identity = 95/132 (71.97%), Postives = 103/132 (78.03%), Query Frame = 3
Query:   93 GSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDP-AKNVDG-CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGV 482
            G ++AKDYTDPPP PL DA EL  WS YRA+IAEFIA            IGYK QTD  A   D  C GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSLVRA++Y+VAQCLGAI GV
Sbjct:   14 GEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGV 145          
BLAST of CF509696 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 4.992e-48
Identity = 100/145 (68.97%), Postives = 108/145 (74.48%), Query Frame = 3
Query:   63 MAKDTGV---AEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDP-AKNVDG-CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGV 482
            M KD  +   A  G ++AKDYTDPPP PL DA EL  WS YRA+IAEFIA            IGYK QTD  A   D  C GVG+LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRA++Y+VAQCLGAI GV
Sbjct:    1 MGKDDVIESGAGGGEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGV 145          
The following BLAST results are available for this feature:
BLAST of CF509696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
PIP25_ARATH1.602e-5477.61Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP23_ORYSJ2.394e-5069.66Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP22_ORYSJ3.127e-5069.44Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP23_MAIZE1.188e-4973.13Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP24_MAIZE1.552e-4969.44Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP22_MAIZE1.716e-4868.03Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP23_ARATH3.822e-4868.57Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP22_ARATH3.822e-4868.57Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP21_ORYSJ4.992e-4871.97Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP21_MAIZE4.992e-4868.97Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-204 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_C11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509696 ID=CF509696; Name=CF509696; organism=Citrus sinensis; type=EST; length=483bp
GTGGCTTTGCAGTGCTCTCAGTTTTCTCTGTTTCTCTCCAAATCATTGTT
ACTGGTTTTCCAATGGCGAAGGACACTGGGGTGGCAGAGCACGGCTCATA
TTCAGCCAAGGACTACACGGACCCACCGCCGGAGCCGCTATTCGACGCCG
TGGAGCTGACCAAATGGTCATTCTACAGAGCCTTGATAGCTGAGTTCATA
GCAACCCTGCTCTTTCTTTACGTCACTGTCTTGACTGTCATTGGCTACAA
AAGCCAGACCGATCCCGCCAAGAACGTCGACGGCTGTGCCGGCGTCGGCA
TCCTCGGCATCGCCTGGGCCTTCGGTGGCATGATCTTTGTCCTCGTTTAC
TGCACCGCCGGTATCTCAGGTGGTCACATTAACCCGGCAGTGACGTTCGG
ACTATTCTTGGCCCGCAAGGTGTCGTTGGTCCGTGCTGTGATGTACATGG
TGGCGCAGTGCCTTGGTGCTATCTCCGGTGTTG
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