CF509701

Overview
NameCF509701
Unique NameCF509701
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5821 contig Csv1_Contig5821:564..1123. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509701 vs. ExPASy Swiss-Prot
Match: MPPB_ARATH (Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 5.150e-70
Identity = 135/185 (72.97%), Postives = 149/185 (80.54%), Query Frame = 1
Query:    4 RDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAGA 558
            R LEEEIE++GGHLNAYTSREQTTYYAKVLD +VN ALD+LADILQNS F++ RI RERDVILR           V+ DHLHATAFQYTPLGRTILGPAQN+K+IT+E LQNYI THYTA RMVIAA+GA            LFTKLS+DPTT SQLVANEPA FTGSEVR+IDDD+PLAQFA A
Sbjct:  157 RALEEEIEDIGGHLNAYTSREQTTYYAKVLDSNVNQALDVLADILQNSKFEEQRINRERDVILREMQEVEGQTDEVVLDHLHATAFQYTPLGRTILGPAQNVKSITREDLQNYIKTHYTASRMVIAAAGAVKHEEVVEQVKKLFTKLSSDPTTTSQLVANEPASFTGSEVRMIDDDLPLAQFAVA 341          
BLAST of CF509701 vs. ExPASy Swiss-Prot
Match: MPPB_BOVIN (Mitochondrial-processing peptidase subunit beta OS=Bos taurus GN=PMPCB PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 6.339e-44
Identity = 96/184 (52.17%), Postives = 119/184 (64.67%), Query Frame = 1
Query:    7 DLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAGA 558
            DLE EIENMG HLNAYTSREQT YYAK   KD+  A++ILADI+QNST  +A I RER VILR           V+FD+LHATA+Q T LGRTILGP +NIK+I ++ L +YI THY  PR+V+AA+G              F +  +  T   ++ A  P  FTGSE+R+ DD +PLA  A A
Sbjct:  119 DLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKGPRIVLAAAGGVSHDELLELAKFHFGESLS--THKGEIPALPPCKFTGSEIRVRDDKMPLAHLAVA 300          
BLAST of CF509701 vs. ExPASy Swiss-Prot
Match: MPPB_NEUCR (Mitochondrial-processing peptidase subunit beta OS=Neurospora crassa GN=pep PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 8.279e-44
Identity = 92/184 (50.00%), Postives = 119/184 (64.67%), Query Frame = 1
Query:    4 RDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSAD-PTTASQLVANEPAIFTGSEVRIIDDDIPLAQFA 552
            + LE EIENMG HLNAYTSRE T Y+AK L++DV   +DIL DILQNS  +++ I RERDVILR           V+FDHLHATA+Q+ PLGRTILGP +NI+ IT+  L NYI  +YTA RMV+  +G              F+KL A  P +++ +++ +   F GS++RI DD IP A  A
Sbjct:  100 QQLELEIENMGAHLNAYTSRENTVYFAKALNEDVPKCVDILQDILQNSKLEESAIERERDVILRESEEVEKQLEEVVFDHLHATAYQHQPLGRTILGPRENIRDITRTELVNYIKNNYTADRMVLVGAGGVPHEQLVEMADKYFSKLPATAPVSSASILSKKKPDFIGSDIRIRDDTIPTANIA 283          
BLAST of CF509701 vs. ExPASy Swiss-Prot
Match: MPPB_PONAB (Mitochondrial-processing peptidase subunit beta OS=Pongo abelii GN=PMPCB PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.412e-43
Identity = 95/182 (52.20%), Postives = 117/182 (64.29%), Query Frame = 1
Query:    7 DLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFA 552
            DLE EIENMG HLNAYTSREQT YYAK   KD+  A++ILADI+QNST  +A I RER VILR           V+FD+LHATA+Q T LGRTILGP +NIK+I+++ L +YI THY  PR+V+AA+G              F       T   ++ A  P  FTGSE+R+ DD +PLA  A
Sbjct:  118 DLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVSHDELLDLAKFHFGDSLC--THKGEIPALPPCKFTGSEIRVRDDKMPLAHLA 297          
BLAST of CF509701 vs. ExPASy Swiss-Prot
Match: MPPB_HUMAN (Mitochondrial-processing peptidase subunit beta OS=Homo sapiens GN=PMPCB PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 1.412e-43
Identity = 95/182 (52.20%), Postives = 117/182 (64.29%), Query Frame = 1
Query:    7 DLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFA 552
            DLE EIENMG HLNAYTSREQT YYAK   KD+  A++ILADI+QNST  +A I RER VILR           V+FD+LHATA+Q T LGRTILGP +NIK+I+++ L +YI THY  PR+V+AA+G              F       T   ++ A  P  FTGSE+R+ DD +PLA  A
Sbjct:  118 DLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVSHDELLDLAKFHFGDSLC--THKGEIPALPPCKFTGSEIRVRDDKMPLAHLA 297          
BLAST of CF509701 vs. ExPASy Swiss-Prot
Match: MPPB_RAT (Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus GN=Pmpcb PE=1 SV=3)

HSP 1 Score: 173.711 bits (439), Expect = 5.367e-43
Identity = 97/186 (52.15%), Postives = 118/186 (63.44%), Query Frame = 1
Query:    7 DLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTA--SQLVANEPAIFTGSEVRIIDDDIPLAQFAGA 558
            DLE EIENMG HLNAYTSREQT YYAK   KD+  A++ILADI+QNST  +A I RER VILR           V+FD+LHATA+Q T LGRTILGP +NIK+I+++ L +YI THY  PR+V+AA+G              F     D   A    + A  P  FTGSE+R+ DD +PLA  A A
Sbjct:  118 DLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVCHNELLELAKFHF----GDSLCAHKGDVPALPPCKFTGSEIRVRDDKMPLAHLAVA 299          
BLAST of CF509701 vs. ExPASy Swiss-Prot
Match: MPPB_MOUSE (Mitochondrial-processing peptidase subunit beta OS=Mus musculus GN=Pmpcb PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.561e-42
Identity = 94/182 (51.65%), Postives = 115/182 (63.19%), Query Frame = 1
Query:    7 DLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFA 552
            DLE EIENMG HLNAYTSREQT YYAK   +D+  A++ILADI+QNST  +A I RER VILR           V+FD+LHATA+Q T LGRTILGP +NIK+I ++ L +YI THY  PR+V+AA+G              F         A  + A  P  FTGSE+R+ DD +PLA  A
Sbjct:  118 DLELEIENMGAHLNAYTSREQTVYYAKAFSRDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKGPRIVLAAAGGVCHNELLELAKFHFGDSLCSHKGA--IPALPPCKFTGSEIRVRDDKMPLAHLA 297          
BLAST of CF509701 vs. ExPASy Swiss-Prot
Match: MPPB_LENED (Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes GN=mppB PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.322e-41
Identity = 92/183 (50.27%), Postives = 112/183 (61.20%), Query Frame = 1
Query:   10 LEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKL--SADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFA 552
            LE E+EN+G HLNAYTSREQT YYAK   KDV  A+DI++DILQNS  +   I RERDVILR           V+FDHLHA AFQ  PLGRTILGP  NI +I ++ L +YI T+YTA RMV+  +G              F+ L  SA+P    +L +     F GSE RI DD++P A  A
Sbjct:   91 LELEVENIGAHLNAYTSREQTVYYAKSFSKDVPVAVDIISDILQNSKLESGAIERERDVILREQQEVDKQLEEVVFDHLHAVAFQGQPLGRTILGPKNNILSIQRDDLASYIQTNYTADRMVLVGTGGVDHQSLVKLAEKHFSSLPVSANPLALGRLSSERKPTFVGSEARIRDDELPTAHVA 273          
BLAST of CF509701 vs. ExPASy Swiss-Prot
Match: MPPB_BLAEM (Mitochondrial-processing peptidase subunit beta OS=Blastocladiella emersonii GN=MPP1 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.333e-38
Identity = 92/181 (50.83%), Postives = 109/181 (60.22%), Query Frame = 1
Query:   10 LEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFA 552
            LE EIENMGGHLNAYTSREQT YYAK+  +DV   ++IL DILQNST D   I RER VILR           V+FDHLHA AF    LG TILGP +NI+T+++  LQ YI  +YTA RMV+  +G              F KL   P  + +     PA FTGS+VRI  DD+P A  A
Sbjct:   97 LEIEIENMGGHLNAYTSREQTVYYAKLFSQDVAKGVNILGDILQNSTLDPGAIDRERAVILREAEEVDKQVEEVVFDHLHAAAFPENALGYTILGPKENIQTLSQADLQAYIKNNYTADRMVVVGAGNVDHAELCKLAETNFGKL---PQGSGKAKFVRPA-FTGSDVRIRVDDMPTAHIA 273          
BLAST of CF509701 vs. ExPASy Swiss-Prot
Match: MPPB_DICDI (Mitochondrial-processing peptidase subunit beta OS=Dictyostelium discoideum GN=mppB PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 3.980e-38
Identity = 86/185 (46.49%), Postives = 113/185 (61.08%), Query Frame = 1
Query:    4 RDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAGA 558
            + +E EIENMGG LNA+TSRE + YY KVL  +V NA+DIL+DILQNS F+ + I +ERD IL            V+FD LHA AFQ + LGRTILGP +NIK+IT+E +Q +I+ +YT  R+VI+A+GA             F  +     +     A     F GSE+R+ DD+ PL  FA A
Sbjct:   95 QSIETEIENMGGSLNAFTSREHSAYYMKVLKDNVPNAVDILSDILQNSKFETSLIEQERDTILSENDYIQSKEDEVVFDQLHAAAFQGSALGRTILGPVENIKSITREQIQEFINENYTGDRLVISAAGAVNHEQLVEQVKEKFANVKMSQVSKDVKRAAITNDFIGSELRVRDDEQPLIHFAVA 279          
The following BLAST results are available for this feature:
BLAST of CF509701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
MPPB_ARATH5.150e-7072.97Probable mitochondrial-processing peptidase subuni... [more]
MPPB_BOVIN6.339e-4452.17Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_NEUCR8.279e-4450.00Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_PONAB1.412e-4352.20Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_HUMAN1.412e-4352.20Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_RAT5.367e-4352.15Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_MOUSE1.561e-4251.65Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_LENED1.322e-4150.27Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_BLAEM2.333e-3850.83Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_DICDI3.980e-3846.49Mitochondrial-processing peptidase subunit beta OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-209 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509701 ID=CF509701; Name=CF509701; organism=Citrus sinensis; type=EST; length=560bp
GCGAGAGATTTGGAGGAGGAGATCGAGAATATGGGGGGGCATTTGAATGC
TTACACTAGCAGGGAACAGACGACCTATTATGCCAAGGTGTTGGATAAGG
ATGTGAATAATGCTTTGGATATTTTGGCAGATATTTTGCAGAACTCGACG
TTTGATCAAGCGAGGATCACCAGGGAACGGGATGTTATTTTGAGAGAAAT
GGAGGAGGTTGAGGGGCAAACAGAGGAAGTCATTTTTGATCATTTGCATG
CAACTGCATTCCAGTACACTCCTTTGGGGAGAACTATTCTCGGTCCTGCT
CAGAATATCAAGACAATCACAAAAGAACATCTGCAGAACTATATTCACAC
TCACTATACTGCTCCCAGAATGGTGATTGCTGCTTCTGGAGCTGTGAAGC
ATGAAGAAGTTGTTGAGCAAGTGAAGAAATTGTTCACAAAATTATCAGCG
GATCCAACCACTGCTTCTCAATTAGTTGCAAATGAACCAGCAATTTTCAC
TGGTTCTGAGGTTAGAATAATTGATGACGATATTCCTTTGGCACAATTTG
CGGGTGCTTT
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