CF509703

Overview
NameCF509703
Unique NameCF509703
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length522
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509703 vs. ExPASy Swiss-Prot
Match: RNZ2_PANTR (Zinc phosphodiesterase ELAC protein 2 OS=Pan troglodytes GN=ELAC2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16
Identity = 46/100 (46.00%), Postives = 55/100 (55.00%), Query Frame = 2
Query:    2 PSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVGKLRCIWISHIHADHHXXXXXXXXXXXXXXK--GVPHEPLLVVGPGPLKRYLDAY 295
            P K RNVS+  VN+    SLLLDCGEGT GQL R YG +  D  +G L  +++SH+HADHH                 G P  PLLVV P  LK +L  Y
Sbjct:  493 PMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYG-DQVDRVLGTLAAVFVSHLHADHHTGLLNILLQRERALASLGKPFHPLLVVAPNQLKAWLQQY 591          
BLAST of CF509703 vs. ExPASy Swiss-Prot
Match: RNZ2_MACFA (Zinc phosphodiesterase ELAC protein 2 OS=Macaca fascicularis GN=ELAC2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.066e-16
Identity = 46/100 (46.00%), Postives = 55/100 (55.00%), Query Frame = 2
Query:    2 PSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVGKLRCIWISHIHADHHXXXXXXXXXXXXXXK--GVPHEPLLVVGPGPLKRYLDAY 295
            P K RNVS+  VN+    SLLLDCGEGT GQL R YG +  D  +G L  +++SH+HADHH                 G P  PLLVV P  LK +L  Y
Sbjct:  493 PMKTRNVSATLVNISPDTSLLLDCGEGTFGQLYRHYG-DQVDRVLGSLAAVFVSHLHADHHTGLLNILLQRERALASLGKPFHPLLVVAPTQLKAWLQQY 591          
BLAST of CF509703 vs. ExPASy Swiss-Prot
Match: RNZ2_HUMAN (Zinc phosphodiesterase ELAC protein 2 OS=Homo sapiens GN=ELAC2 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.053e-15
Identity = 46/100 (46.00%), Postives = 55/100 (55.00%), Query Frame = 2
Query:    2 PSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVGKLRCIWISHIHADHHXXXXXXXXXXXXXXK--GVPHEPLLVVGPGPLKRYLDAY 295
            P K RNVS+  VN+    SLLLDCGEGT GQL R YG +  D  +G L  +++SH+HADHH                 G P  PLLVV P  LK +L  Y
Sbjct:  493 PMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYG-DQVDRVLGTLAAVFVSHLHADHHTGLPSILLQRERALASLGKPLHPLLVVAPNQLKAWLQQY 591          
BLAST of CF509703 vs. ExPASy Swiss-Prot
Match: RNZ2_GORGO (Zinc phosphodiesterase ELAC protein 2 OS=Gorilla gorilla gorilla GN=ELAC2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.053e-15
Identity = 46/100 (46.00%), Postives = 55/100 (55.00%), Query Frame = 2
Query:    2 PSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVGKLRCIWISHIHADHHXXXXXXXXXXXXXXK--GVPHEPLLVVGPGPLKRYLDAY 295
            P K RNVS+  VN+    SLLLDCGEGT GQL R YG +  D  +G L  +++SH+HADHH                 G P  PLLVV P  LK +L  Y
Sbjct:  493 PMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYG-DQVDRVLGTLAAVFVSHLHADHHTGLLNILLQREQALASLGKPLHPLLVVAPSQLKAWLQQY 591          
BLAST of CF509703 vs. ExPASy Swiss-Prot
Match: RNZ2_RAT (Zinc phosphodiesterase ELAC protein 2 OS=Rattus norvegicus GN=Elac2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15
Identity = 45/100 (45.00%), Postives = 55/100 (55.00%), Query Frame = 2
Query:    2 PSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVGKLRCIWISHIHADHHXXXXXXXXXXXXXXK--GVPHEPLLVVGPGPLKRYLDAY 295
            P K RNVSS  VNL    S+LLDCGEGT GQL R YG +  D  +  L  +++SH+HADHH                 G P +PLLVV P  L+ +L  Y
Sbjct:  492 PMKIRNVSSTLVNLSPDKSVLLDCGEGTFGQLCRHYG-QQIDRVLCNLTAVFVSHLHADHHTGLLNILLQREHALASLGKPFQPLLVVAPTQLRAWLQQY 590          
BLAST of CF509703 vs. ExPASy Swiss-Prot
Match: RNZ2_MOUSE (Zinc phosphodiesterase ELAC protein 2 OS=Mus musculus GN=Elac2 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15
Identity = 45/100 (45.00%), Postives = 55/100 (55.00%), Query Frame = 2
Query:    2 PSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVGKLRCIWISHIHADHHXXXXXXXXXXXXXXK--GVPHEPLLVVGPGPLKRYLDAY 295
            P K RNVSS  VNL    S+LLDCGEGT GQL R YG +  D  +  L  +++SH+HADHH                 G P +PLLVV P  L+ +L  Y
Sbjct:  489 PMKIRNVSSTLVNLSPDKSVLLDCGEGTFGQLCRHYG-QQIDRVLCSLTAVFVSHLHADHHTGLLNILLQREHALASLGKPFQPLLVVAPTQLRAWLQQY 587          
BLAST of CF509703 vs. ExPASy Swiss-Prot
Match: RNZ_DROME (Ribonuclease Z, mitochondrial OS=Drosophila melanogaster GN=JhI-1 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 3.172e-12
Identity = 37/100 (37.00%), Postives = 55/100 (55.00%), Query Frame = 2
Query:    2 PSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVGKLRCIWISHIHADHHXXXXXXXXXXXXXXKGVPHEPLLVVGPGPLKRYLDAYER 301
            P+K RNVSSI +       +LLDCGEGT GQ+ R YG E     + +L+ I++SH+HADHH                   +PL+++ P  ++ +L+ Y R
Sbjct:  467 PNKTRNVSSILIRTAIDAYVLLDCGEGTYGQIVRLYGHEKGQLILRQLQAIYVSHLHADHHIGLIGLLRERRQLKPRA--DPLILLAPRQIEPWLEFYNR 564          
BLAST of CF509703 vs. ExPASy Swiss-Prot
Match: RNZ1_SCHPO (Probable ribonuclease Z 1 OS=Schizosaccharomyces pombe GN=SPAC1D4.10 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.229e-12
Identity = 43/117 (36.75%), Postives = 58/117 (49.57%), Query Frame = 2
Query:    2 PSKYRNVSSIYVNL-----------FSKGSLLLDCGEGTLGQLKRRYGVEGADSAVGKLRCIWISHIHADHHXXXXXXXXXXXXXXKGVPHEPLLVVGPGPLKRYLDAYERLEDLDM 319
            PS YRNVSS YV +            S  ++LLDCGEGTLG+L R+YG +     +  LR I+ISH+HADHH               G     L +  P   + +L  Y R++ L +
Sbjct:  510 PSLYRNVSSTYVRIPVDKKCMEDSAISMKNILLDCGEGTLGRLSRQYG-DNLKYEIASLRWIYISHMHADHHAGVIGVLKAWTKYSDG--RSKLFITAPPQFEFWLLEYSRIDYLPL 623          
The following BLAST results are available for this feature:
BLAST of CF509703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
RNZ2_PANTR6.176e-1646.00Zinc phosphodiesterase ELAC protein 2 OS=Pan trogl... [more]
RNZ2_MACFA8.066e-1646.00Zinc phosphodiesterase ELAC protein 2 OS=Macaca fa... [more]
RNZ2_HUMAN1.053e-1546.00Zinc phosphodiesterase ELAC protein 2 OS=Homo sapi... [more]
RNZ2_GORGO1.053e-1546.00Zinc phosphodiesterase ELAC protein 2 OS=Gorilla g... [more]
RNZ2_RAT8.918e-1545.00Zinc phosphodiesterase ELAC protein 2 OS=Rattus no... [more]
RNZ2_MOUSE8.918e-1545.00Zinc phosphodiesterase ELAC protein 2 OS=Mus muscu... [more]
RNZ_DROME3.172e-1237.00Ribonuclease Z, mitochondrial OS=Drosophila melano... [more]
RNZ1_SCHPO9.229e-1236.75Probable ribonuclease Z 1 OS=Schizosaccharomyces p... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-211 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509703 ID=CF509703; Name=CF509703; organism=Citrus sinensis; type=EST; length=522bp
GCCTTCTAAATACCGGAATGTTAGTTCTATATATGTTAATCTTTTCTCCA
AAGGAAGTTTGCTCCTAGATTGTGGTGAAGGAACCCTGGGTCAACTGAAA
AGAAGATATGGTGTAGAGGGCGCTGACAGTGCAGTTGGAAAGCTAAGGTG
TATTTGGATATCTCACATTCACGCTGATCACCATGCGGGTTTGGCAAGAA
TACTCGCTCTTAGACGTGATTTGTTGAAGGGTGTGCCACATGAGCCATTG
CTTGTTGTAGGCCCTGGGCCTCTTAAGAGGTACCTAGATGCATATGAAAG
ACTTGAAGATCTAGACATGCAGTTCCTTCACTGTAGGTACACTAGAGAAG
CTTCATGGAATGATTTTGAGGGCAATGGTGAACCAGTTAAGAATCTATCA
ACTCCTGGAAGTCCATTTAGTACTGAGGGGCTGATCAATAAAACTGAGGC
GAATTTGTTTGCTAAAGGAAGCTGTATGCAGAGTGTTTGGAAGGGACCTG
GCATTCCAGTTGACAACAATGC
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