CF509727

Overview
NameCF509727
Unique NameCF509727
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length468
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3937 contig Csv1_Contig3937:752..1219. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509727 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 255.373 bits (651), Expect = 9.154e-68
Identity = 125/156 (80.13%), Postives = 135/156 (86.54%), Query Frame = 1
Query:    1 VVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGE 468
            VVTDGERILGLGDLGCQG+GIPVGKL+LYTALGG+RPSACLP+T+DVGTNNEQLLKDEFYIGLRQRRATGQEY+ELL EFM+AVKQNYGEKVLIQFEDFANHNAF+LLAKYGTTHLVFNDDIQ                   +LA+H FLFLGAGE
Sbjct:  186 VVTDGERILGLGDLGCQGIGIPVGKLSLYTALGGVRPSACLPVTIDVGTNNEQLLKDEFYIGLRQRRATGQEYSELLHEFMTAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTTHLVFNDDIQGTAAVVLAGLISALKLLGGSLADHTFLFLGAGE 341          
BLAST of CF509727 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 8.568e-66
Identity = 122/156 (78.21%), Postives = 134/156 (85.90%), Query Frame = 1
Query:    1 VVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGE 468
            VVTDGERILGLGDLGCQGMGIPVGKL+LYTALGGIRPSACLPIT+DVGTNNE++L DEFYIGLRQRRA+G+EYAEL++EFMSAVKQNYGEKVLIQFEDFANHNAF+LL KY TTHLVFNDDIQ                   +LA+H+FLFLGAGE
Sbjct:  242 VVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPITIDVGTNNEKMLNDEFYIGLRQRRASGKEYAELMNEFMSAVKQNYGEKVLIQFEDFANHNAFDLLEKYRTTHLVFNDDIQGTASVVLAGLISALKLVGGSLADHKFLFLGAGE 397          
BLAST of CF509727 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 1.462e-65
Identity = 121/156 (77.56%), Postives = 132/156 (84.62%), Query Frame = 1
Query:    1 VVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGE 468
            VVTDGERILGLGDLGCQGMGIPVGKL+LYTALGG+RPSACLPIT+DVGTNNE+LL +EFYIGL+QRRATG+EY+E L EFMS VKQNYGEKVLIQFEDFANHNAF+LLAKYGTTHL FNDDIQ                   TLA+H+FLFLGAGE
Sbjct:  186 VVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLANEFYIGLKQRRATGKEYSEFLQEFMSPVKQNYGEKVLIQFEDFANHNAFDLLAKYGTTHLAFNDDIQGTASVVLAGIVSALRLLGGTLADHKFLFLGAGE 341          
BLAST of CF509727 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 246.128 bits (627), Expect = 5.554e-65
Identity = 122/156 (78.21%), Postives = 131/156 (83.97%), Query Frame = 1
Query:    1 VVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGE 468
            VVTDGERILGLGDLGCQGMGIPVGKL+LYTALGG+RPSACLPIT+DVGTNNEQLL DEFYIGLRQRRATG+EY EL++EFMSAVKQ YGEKVLIQFEDFANHNAF+LLAKY  +HLVFNDDIQ                   TLAEH +LFLGAGE
Sbjct:  234 VVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEQLLNDEFYIGLRQRRATGKEYHELMEEFMSAVKQIYGEKVLIQFEDFANHNAFDLLAKYSKSHLVFNDDIQGTASVVLAGLLSSLKVVGGTLAEHTYLFLGAGE 389          
BLAST of CF509727 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 9.473e-65
Identity = 119/156 (76.28%), Postives = 130/156 (83.33%), Query Frame = 1
Query:    1 VVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGE 468
            VVTDGERILGLGDLGCQGMGIPVGKL+LYTALGG+RPS+CLP+T+DVGTNNE+LL DEFYIGLRQRRATGQEYA  LDEFM AVKQNYGEKVL+QFEDFANHNAF+LL KY ++HLVFNDDIQ                   TLA+H FLFLGAGE
Sbjct:  184 VVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPVTIDVGTNNEKLLNDEFYIGLRQRRATGQEYATFLDEFMRAVKQNYGEKVLVQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGE 339          
BLAST of CF509727 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 1.368e-63
Identity = 117/156 (75.00%), Postives = 131/156 (83.97%), Query Frame = 1
Query:    1 VVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGE 468
            VVTDGERILGLGDLGCQGMGIPVGKL+LY+ALGG+ PSACLPIT+DVGTNN++LL DEFYIGL+Q+RATG+EYAE + EFMSAVKQNYGEK+L+QFEDFANHNAFELL KY TTHLVFNDDIQ                   TLA+H+FLFLGAGE
Sbjct:  180 VVTDGERILGLGDLGCQGMGIPVGKLSLYSALGGVCPSACLPITLDVGTNNQKLLDDEFYIGLKQKRATGEEYAEFVQEFMSAVKQNYGEKILVQFEDFANHNAFELLEKYRTTHLVFNDDIQGTASVVLAGLIASLKLLGGTLADHKFLFLGAGE 335          
BLAST of CF509727 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 1.158e-62
Identity = 119/157 (75.80%), Postives = 131/157 (83.44%), Query Frame = 1
Query:    1 VVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKD-EFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGE 468
            VVTDGERILGLGDLGCQGMGIPVGKLALYTALGG+RPSACLPIT+DVGTNNE+LL D EFYIGL+Q+RA GQEYAEL++EFMSAVKQNYGE +LIQFEDFANHNAF+LL KY TTHLVFNDDIQ                   +LA+ +FLFLGAGE
Sbjct:  242 VVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPITIDVGTNNEKLLNDDEFYIGLKQKRAAGQEYAELMNEFMSAVKQNYGENLLIQFEDFANHNAFDLLEKYRTTHLVFNDDIQGTASVVLGGLISALKLVGGSLADQKFLFLGAGE 398          
BLAST of CF509727 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 1.672e-61
Identity = 118/156 (75.64%), Postives = 128/156 (82.05%), Query Frame = 1
Query:    1 VVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGE 468
            VVTDGERILGLGDLGCQGMGIPVGKL+LY+ALGGIRPSACLP+T+DVG    + + DEFYIGLRQRRATGQEY+ELLDEFM AVKQNYGEKVLIQFEDFANHNAF LLAKYGT+HLVFNDDIQ                   +L+EH FLFLGAGE
Sbjct:  170 VVTDGERILGLGDLGCQGMGIPVGKLSLYSALGGIRPSACLPVTIDVG-QTMKFVDDEFYIGLRQRRATGQEYSELLDEFMYAVKQNYGEKVLIQFEDFANHNAFNLLAKYGTSHLVFNDDIQGTASVVLAGLMAALNLVGGSLSEHTFLFLGAGE 324          
BLAST of CF509727 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 6.354e-61
Identity = 116/155 (74.84%), Postives = 125/155 (80.65%), Query Frame = 1
Query:    4 VTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGE 468
            VTDGERILGLGDLGCQGMGIPVGKLALYTALGG+ PS CLPIT+DVGTNNE LL DEFYIGLRQ+RATG+EY EL++EFMSAVKQ YGEKVLIQFEDFANHNAF+LL KY  +HLVFNDDIQ                   TLAE  +LFLGAGE
Sbjct:  232 VTDGERILGLGDLGCQGMGIPVGKLALYTALGGVDPSVCLPITIDVGTNNEFLLNDEFYIGLRQKRATGEEYDELIEEFMSAVKQFYGEKVLIQFEDFANHNAFDLLEKYSKSHLVFNDDIQGTASVVLAGLLAALKMVGGTLAEQTYLFLGAGE 386          
BLAST of CF509727 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.344e-47
Identity = 95/156 (60.90%), Postives = 103/156 (66.03%), Query Frame = 1
Query:    1 VVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGE 468
            VVTDGERILGLGDLGC GMGIPVGKLALYTA GG+ P  CLP+ +DVGT NE+LLKD  YIGLRQRR  G EY + LDEFM AV   YG   LIQFEDFAN NAF LL KY   +  FNDDIQ                    L++   LF GAGE
Sbjct:  135 VVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGE 290          
The following BLAST results are available for this feature:
BLAST of CF509727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_POPTR9.154e-6880.13NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOC_FLAPR8.568e-6678.21NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_VITVI1.462e-6577.56NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOC_ORYSJ5.554e-6578.21NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOX_PHAVU9.473e-6576.28NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOX_MESCR1.368e-6375.00NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOC_FLATR1.158e-6275.80NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_SOLLC1.672e-6175.64NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOC_MAIZE6.354e-6174.84NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOX_PIG2.344e-4760.90NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-235 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509727 ID=CF509727; Name=CF509727; organism=Citrus sinensis; type=EST; length=468bp
GTTGTCACAGATGGTGAGCGCATTTTGGGACTTGGGGATCTTGGCTGTCA
GGGGATGGGAATTCCTGTTGGGAAATTGGCTTTGTACACAGCACTTGGAG
GCATTCGTCCCTCAGCATGTTTGCCCATAACCGTTGATGTGGGTACAAAC
AATGAGCAATTGTTGAAGGATGAATTCTACATTGGTCTACGACAGAGGAG
GGCAACCGGACAGGAATATGCTGAACTTCTAGATGAATTCATGAGTGCTG
TCAAGCAAAATTATGGAGAAAAAGTTCTTATACAGTTTGAGGATTTCGCA
AACCACAATGCTTTTGAGTTGCTTGCAAAATATGGCACAACTCATCTTGT
CTTCAATGATGATATACAGGGTACAGCGTCTGTTGTTCTTGCTGGGGTAG
TTGCAGCACTGAAGTTGATTGGTGGCACACTGGCCGAGCATAGATTTTTG
TTTCTTGGAGCTGGGGAG
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