CF509761
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 3.260e-41 Identity = 78/114 (68.42%), Postives = 89/114 (78.07%), Query Frame = 2 Query: 128 GGAVAAKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIV----KSSAFNFL 457 G AA+ CD CK+ AAVFCRVDSAFLC+ CD RIH+ +H RVW+CEVCEQAPAAVTCKADAAALCV+CD DIHSANPLA RHER+P+E FFDSA++ V SS F L Sbjct: 14 GWGAAARSCDACKSVTAAVFCRVDSAFLCIACDTRIHS-FTRHERVWVCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKISASSTFGIL 126 HSP 2 Score: 25.409 bits (54), Expect = 3.260e-41 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 88 MGIELHSVKVISGGW 132 MG L S+K ISGGW Sbjct: 1 MGFGLESIKSISGGW 15
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 2.246e-40 Identity = 76/112 (67.86%), Postives = 93/112 (83.04%), Query Frame = 2 Query: 137 VAAKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFD--SADSIVKSSAFNFL 457 +A+K CD+CK+A AA++CR D+AFLCL+CD ++H ++HARVWMCEVCEQAPA VTCKADAAALCVTCD DIHSANPLARRHER+P+ PF+D S+D VK +A NFL Sbjct: 1 MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFL 112
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.968e-36 Identity = 72/120 (60.00%), Postives = 92/120 (76.67%), Query Frame = 2 Query: 134 AVAAKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIVK-SSAFNFLVPSDQNGG 481 A +++ CD+CK+ AA +FCR D+AFLC +CD +IH ++H RVW+CEVCEQAPA VTCKADAAALCVTCD DIHSANPL+RRHER+PI PF+D+ SS+ NF+ D++GG Sbjct: 2 ASSSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSVNFV---DEDGG 118
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.972e-28 Identity = 54/91 (59.34%), Postives = 72/91 (79.12%), Query Frame = 2 Query: 143 AKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEP 406 A+ CDTC++AA V+CR DSA+LC +CD ++H ++H RV +C+ CE+APAA CKADAA+LC TCD++IHSANPLARRH+R+PI P Sbjct: 9 AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILP 99
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.670e-27 Identity = 50/91 (54.95%), Postives = 71/91 (78.02%), Query Frame = 2 Query: 143 AKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEP 406 A+PCDTC++ A V+C DSA+LC++CD ++H+ ++H RV +CE CE+APAA C+AD A+LC CD+++HSANPLARRH+R+PI P Sbjct: 17 ARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILP 107
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.670e-27 Identity = 53/91 (58.24%), Postives = 67/91 (73.63%), Query Frame = 2 Query: 143 AKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEP 406 A+ CDTC++AA V+C DSA+LC CD R+H ++H RV +C+ CE APAA CKADAA+LC CD +IHSANPLARRH+R+PI P Sbjct: 13 ARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILP 103
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: COL15_ARATH (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana GN=COL15 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.051e-13 Identity = 35/90 (38.89%), Postives = 47/90 (52.22%), Query Frame = 2 Query: 149 PCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF 409 PCD C A +FCR D+A LCL CD ++H KH R +C+ C P +V C D LC CD D+H + ++ H R +E F Sbjct: 8 PCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGF 97
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: COL14_ARATH (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana GN=COL14 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 1.792e-13 Identity = 34/89 (38.20%), Postives = 47/89 (52.81%), Query Frame = 2 Query: 152 CDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF 409 C+ C A +FCR D+A LCL CD +H+ KH R +C+ C + P +V C D LC CD D+H + + HER +E F Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGF 100
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.810e-13 Identity = 33/89 (37.08%), Postives = 52/89 (58.43%), Query Frame = 2 Query: 152 CDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF 409 CD C ++ A V+C+ DSA LCL CD ++H KH R +C+ C ++P+++ C+ + + LC CD H+A+ + H R P E F Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSRRPFEGF 99
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: STHX_ARATH (Probable salt tolerance-like protein At1g75540 OS=Arabidopsis thaliana GN=At1g75540 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.765e-12 Identity = 37/109 (33.94%), Postives = 54/109 (49.54%), Query Frame = 2 Query: 152 CDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWM------------CEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIV 433 CD C A+VFC D A LC CD ++H+ +KH R + C++C+ A + C+ D A LC CD+ IH+AN ++H+R + SA S V Sbjct: 5 CDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSV 113 The following BLAST results are available for this feature:
BLAST of CF509761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509761 ID=CF509761; Name=CF509761; organism=Citrus sinensis; type=EST; length=483bpback to top |