CF509761

Overview
NameCF509761
Unique NameCF509761
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length483
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 3.260e-41
Identity = 78/114 (68.42%), Postives = 89/114 (78.07%), Query Frame = 2
Query:  128 GGAVAAKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIV----KSSAFNFL 457
            G   AA+ CD CK+  AAVFCRVDSAFLC+ CD RIH+   +H RVW+CEVCEQAPAAVTCKADAAALCV+CD DIHSANPLA RHER+P+E FFDSA++ V     SS F  L
Sbjct:   14 GWGAAARSCDACKSVTAAVFCRVDSAFLCIACDTRIHS-FTRHERVWVCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKISASSTFGIL 126          

HSP 2 Score: 25.409 bits (54), Expect = 3.260e-41
Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 1
Query:   88 MGIELHSVKVISGGW 132
            MG  L S+K ISGGW
Sbjct:    1 MGFGLESIKSISGGW 15          
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 2.246e-40
Identity = 76/112 (67.86%), Postives = 93/112 (83.04%), Query Frame = 2
Query:  137 VAAKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFD--SADSIVKSSAFNFL 457
            +A+K CD+CK+A AA++CR D+AFLCL+CD ++H      ++HARVWMCEVCEQAPA VTCKADAAALCVTCD DIHSANPLARRHER+P+ PF+D  S+D  VK +A NFL
Sbjct:    1 MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFL 112          
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.968e-36
Identity = 72/120 (60.00%), Postives = 92/120 (76.67%), Query Frame = 2
Query:  134 AVAAKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIVK-SSAFNFLVPSDQNGG 481
            A +++ CD+CK+ AA +FCR D+AFLC +CD +IH      ++H RVW+CEVCEQAPA VTCKADAAALCVTCD DIHSANPL+RRHER+PI PF+D+       SS+ NF+   D++GG
Sbjct:    2 ASSSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSVNFV---DEDGG 118          
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.972e-28
Identity = 54/91 (59.34%), Postives = 72/91 (79.12%), Query Frame = 2
Query:  143 AKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEP 406
            A+ CDTC++AA  V+CR DSA+LC +CD ++H      ++H RV +C+ CE+APAA  CKADAA+LC TCD++IHSANPLARRH+R+PI P
Sbjct:    9 AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILP 99          
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.670e-27
Identity = 50/91 (54.95%), Postives = 71/91 (78.02%), Query Frame = 2
Query:  143 AKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEP 406
            A+PCDTC++ A  V+C  DSA+LC++CD ++H+     ++H RV +CE CE+APAA  C+AD A+LC  CD+++HSANPLARRH+R+PI P
Sbjct:   17 ARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILP 107          
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.670e-27
Identity = 53/91 (58.24%), Postives = 67/91 (73.63%), Query Frame = 2
Query:  143 AKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEP 406
            A+ CDTC++AA  V+C  DSA+LC  CD R+H      ++H RV +C+ CE APAA  CKADAA+LC  CD +IHSANPLARRH+R+PI P
Sbjct:   13 ARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILP 103          
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: COL15_ARATH (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana GN=COL15 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.051e-13
Identity = 35/90 (38.89%), Postives = 47/90 (52.22%), Query Frame = 2
Query:  149 PCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF 409
            PCD C    A +FCR D+A LCL CD ++H       KH R  +C+ C   P +V C  D   LC  CD D+H +  ++  H R  +E F
Sbjct:    8 PCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGF 97          
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: COL14_ARATH (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana GN=COL14 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.792e-13
Identity = 34/89 (38.20%), Postives = 47/89 (52.81%), Query Frame = 2
Query:  152 CDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF 409
            C+ C    A +FCR D+A LCL CD  +H+      KH R  +C+ C + P +V C  D   LC  CD D+H +   +  HER  +E F
Sbjct:   12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGF 100          
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.810e-13
Identity = 33/89 (37.08%), Postives = 52/89 (58.43%), Query Frame = 2
Query:  152 CDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF 409
            CD C ++ A V+C+ DSA LCL CD ++H       KH R  +C+ C ++P+++ C+ + + LC  CD   H+A+  +  H R P E F
Sbjct:   13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSRRPFEGF 99          
BLAST of CF509761 vs. ExPASy Swiss-Prot
Match: STHX_ARATH (Probable salt tolerance-like protein At1g75540 OS=Arabidopsis thaliana GN=At1g75540 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.765e-12
Identity = 37/109 (33.94%), Postives = 54/109 (49.54%), Query Frame = 2
Query:  152 CDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWM------------CEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIV 433
            CD C    A+VFC  D A LC  CD ++H+     +KH R  +            C++C+   A + C+ D A LC  CD+ IH+AN   ++H+R  +     SA S V
Sbjct:    5 CDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSV 113          
The following BLAST results are available for this feature:
BLAST of CF509761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
COL5_ARATH3.260e-4168.42Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... [more]
COL4_ARATH2.246e-4067.86Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis... [more]
COL3_ARATH1.968e-3660.00Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis... [more]
COL1_ARATH1.972e-2859.34Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis... [more]
CONS_ARATH1.670e-2754.95Zinc finger protein CONSTANS OS=Arabidopsis thalia... [more]
COL2_ARATH1.670e-2758.24Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis... [more]
COL15_ARATH1.051e-1338.89Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsi... [more]
COL14_ARATH1.792e-1338.20Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsi... [more]
COL13_ARATH6.810e-1337.08Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsi... [more]
STHX_ARATH5.765e-1233.94Probable salt tolerance-like protein At1g75540 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-269 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509761 ID=CF509761; Name=CF509761; organism=Citrus sinensis; type=EST; length=483bp
CAAAAACTAGTCTTTGCATTCCTCCACGTTTACTCCGGAGACCAAAACTC
AAAGAAAGAAAGAAAGAGGCTTTATTTAGTAATGCCCATGGGAATTGAAT
TACATAGCGTGAAGGTTATTTCCGGCGGGTGGAGCCGTGGCGGCGAAGCC
ATGCGACACTTGCAAAGCGGCGGCGGCGGCTGTTTTCTGCAGAGTTGACT
CTGCTTTCCTATGCCTGAACTGCGATTTAAGAATCCACAATTGCATGAAC
AAACACGCGCGTGTCTGGATGTGCGAGGTCTGCGAGCAGGCCCCTGCGGC
TGTCACGTGTAAGGCTGATGCGGCTGCCTTGTGTGTCACGTGCGACAATG
ATATCCACTCTGCCAACCCTTTAGCCCGGCGCCATGAACGCCTCCCTATT
GAGCCGTTCTTCGACTCGGCTGACTCGATTGTCAAGTCGTCGGCTTTTAA
CTTCCTGGTTCCGAGTGATCAAAATGGCGGCTC
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