CF509768

Overview
NameCF509768
Unique NameCF509768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509768 vs. ExPASy Swiss-Prot
Match: PIGA_MOUSE (N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein OS=Mus musculus GN=Piga PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 6.157e-56
Identity = 97/160 (60.62%), Postives = 125/160 (78.12%), Query Frame = 2
Query:  110 HRILMVSDFFYPNFGGVENHIYYLSQCLLKFGHKVVVMTHAYGNRSGVRYMTGGLKVYYVPWRPFIMQNTLPTFYGTLPIIRTILIREKISLVHGHQAFSTLCHEALMHARTMGYRVVFTDHSLYGFADVGSIHMNKVLQFTLADVSQAICVSHTSKENT 589
            H I MVSDFFYPN GGVE+HIY LSQCL++ GHKV+ +THAYGNR GVRY+T GLKVYY+P R    Q+T  T + +LP++R I +RE+I+++H H +FS + H+AL HA+TMG + VFTDHSL+GFADV S+  NK+L  +L D +  ICVS+TSKENT
Sbjct:   33 HNICMVSDFFYPNMGGVESHIYQLSQCLIERGHKVITVTHAYGNRKGVRYLTNGLKVYYLPLRVMYNQSTATTLFHSLPLLRYIFVRERITIIHSHSSFSAMAHDALFHAKTMGLQTVFTDHSLFGFADVSSVLTNKLLTVSLCDTNHIICVSYTSKENT 192          
BLAST of CF509768 vs. ExPASy Swiss-Prot
Match: PIGA_HUMAN (Phosphatidylinositol N-acetylglucosaminyltransferase subunit A OS=Homo sapiens GN=PIGA PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.050e-55
Identity = 94/160 (58.75%), Postives = 126/160 (78.75%), Query Frame = 2
Query:  110 HRILMVSDFFYPNFGGVENHIYYLSQCLLKFGHKVVVMTHAYGNRSGVRYMTGGLKVYYVPWRPFIMQNTLPTFYGTLPIIRTILIREKISLVHGHQAFSTLCHEALMHARTMGYRVVFTDHSLYGFADVGSIHMNKVLQFTLADVSQAICVSHTSKENT 589
            H I MVSDFFYPN GGVE+HIY LSQCL++ GHKV+++THAYGNR G+RY+T GLKVYY+P +    Q+T  T + +LP++R I +RE+++++H H +FS + H+AL HA+TMG + VFTDHSL+GFADV S+  NK+L  +L D +  ICVS+TSKENT
Sbjct:   33 HNICMVSDFFYPNMGGVESHIYQLSQCLIERGHKVIIVTHAYGNRKGIRYLTSGLKVYYLPLKVMYNQSTATTLFHSLPLLRYIFVRERVTIIHSHSSFSAMAHDALFHAKTMGLQTVFTDHSLFGFADVSSVLTNKLLTVSLCDTNHIICVSYTSKENT 192          
BLAST of CF509768 vs. ExPASy Swiss-Prot
Match: GPI3_SCHPO (Phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit OS=Schizosaccharomyces pombe GN=gpi3 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.421e-52
Identity = 93/156 (59.62%), Postives = 119/156 (76.28%), Query Frame = 2
Query:  122 MVSDFFYPNFGGVENHIYYLSQCLLKFGHKVVVMTHAYGNRSGVRYMTGGLKVYYVPWRPFIMQNTLPTFYGTLPIIRTILIREKISLVHGHQAFSTLCHEALMHARTMGYRVVFTDHSLYGFADVGSIHMNKVLQFTLADVSQAICVSHTSKENT 589
            MVSDFF+P  GG+E+HI+ LSQ L+  GHKV+V+THAY +R GVRY+T GL VYYVP      + T P+F+   PI R I+IRE I +VHGH + S LCH+A++HARTMG +  FTDHSL+GFAD GSI  NK+L+FT++DV+  ICVSHT +ENT
Sbjct:    1 MVSDFFFPQPGGIESHIFQLSQRLIDLGHKVIVITHAYKDRVGVRYLTNGLTVYYVPLHTVYRETTFPSFFSFFPIFRNIVIRENIEIVHGHGSLSFLCHDAILHARTMGLKTCFTDHSLFGFADAGSIVTNKLLKFTMSDVNHVICVSHTCRENT 156          
BLAST of CF509768 vs. ExPASy Swiss-Prot
Match: GPI3_YEAST (Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae GN=SPT14 PE=1 SV=4)

HSP 1 Score: 193.356 bits (490), Expect = 7.290e-49
Identity = 90/157 (57.32%), Postives = 116/157 (73.89%), Query Frame = 2
Query:  116 ILMVSDFFYPNFGGVENHIYYLSQCLLKFGHKVVVMTHAYGNRSGVRYMTGGLKVYYVPWRPFIMQNTLPTFYGTLPIIRTILIREKISLVHGHQAFSTLCHEALMHARTMGYRVVFTDHSLYGFADVGSIHMNKVLQFTLADVSQAICVSHTSKEN 586
            I M+ DFFYP  GGVE HIY+LSQ L+  GH VV++THAY +R GVR++T GLKVY+VP+     + T PT + T PIIR IL+RE+I +VH H + ST  HE ++HA TMG R VFTDHSLYGF ++ SI +NK+L FTL ++ + ICVS+T KEN
Sbjct:    5 IAMLCDFFYPQLGGVEFHIYHLSQKLIDLGHSVVIITHAYKDRVGVRHLTNGLKVYHVPFFVIFRETTFPTVFSTFPIIRNILLREQIQIVHSHGSASTFAHEGILHANTMGLRTVFTDHSLYGFNNLTSIWVNKLLTFTLTNIDRVICVSNTCKEN 161          
BLAST of CF509768 vs. ExPASy Swiss-Prot
Match: GPI3_YEAS7 (Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain YJM789) GN=SPT14 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.290e-49
Identity = 90/157 (57.32%), Postives = 116/157 (73.89%), Query Frame = 2
Query:  116 ILMVSDFFYPNFGGVENHIYYLSQCLLKFGHKVVVMTHAYGNRSGVRYMTGGLKVYYVPWRPFIMQNTLPTFYGTLPIIRTILIREKISLVHGHQAFSTLCHEALMHARTMGYRVVFTDHSLYGFADVGSIHMNKVLQFTLADVSQAICVSHTSKEN 586
            I M+ DFFYP  GGVE HIY+LSQ L+  GH VV++THAY +R GVR++T GLKVY+VP+     + T PT + T PIIR IL+RE+I +VH H + ST  HE ++HA TMG R VFTDHSLYGF ++ SI +NK+L FTL ++ + ICVS+T KEN
Sbjct:    5 IAMLCDFFYPQLGGVEFHIYHLSQKLIDLGHSVVIITHAYKDRVGVRHLTNGLKVYHVPFFVIFRETTFPTVFSTFPIIRNILLREQIQIVHSHGSASTFAHEGILHANTMGLRTVFTDHSLYGFNNLTSIWVNKLLTFTLTNIDRVICVSNTCKEN 161          
BLAST of CF509768 vs. ExPASy Swiss-Prot
Match: GPI3_YEAS6 (Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain AWRI1631) GN=SPT14 PE=3 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 7.290e-49
Identity = 90/157 (57.32%), Postives = 116/157 (73.89%), Query Frame = 2
Query:  116 ILMVSDFFYPNFGGVENHIYYLSQCLLKFGHKVVVMTHAYGNRSGVRYMTGGLKVYYVPWRPFIMQNTLPTFYGTLPIIRTILIREKISLVHGHQAFSTLCHEALMHARTMGYRVVFTDHSLYGFADVGSIHMNKVLQFTLADVSQAICVSHTSKEN 586
            I M+ DFFYP  GGVE HIY+LSQ L+  GH VV++THAY +R GVR++T GLKVY+VP+     + T PT + T PIIR IL+RE+I +VH H + ST  HE ++HA TMG R VFTDHSLYGF ++ SI +NK+L FTL ++ + ICVS+T KEN
Sbjct:    5 IAMLCDFFYPQLGGVEFHIYHLSQKLIDLGHSVVIITHAYKDRVGVRHLTNGLKVYHVPFFVIFRETTFPTVFSTFPIIRNILLREQIQIVHSHGSASTFAHEGILHANTMGLRTVFTDHSLYGFNNLTSIWVNKLLTFTLTNIDRVICVSNTCKEN 161          
BLAST of CF509768 vs. ExPASy Swiss-Prot
Match: GPI3_YEAS1 (Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SPT14 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.290e-49
Identity = 90/157 (57.32%), Postives = 116/157 (73.89%), Query Frame = 2
Query:  116 ILMVSDFFYPNFGGVENHIYYLSQCLLKFGHKVVVMTHAYGNRSGVRYMTGGLKVYYVPWRPFIMQNTLPTFYGTLPIIRTILIREKISLVHGHQAFSTLCHEALMHARTMGYRVVFTDHSLYGFADVGSIHMNKVLQFTLADVSQAICVSHTSKEN 586
            I M+ DFFYP  GGVE HIY+LSQ L+  GH VV++THAY +R GVR++T GLKVY+VP+     + T PT + T PIIR IL+RE+I +VH H + ST  HE ++HA TMG R VFTDHSLYGF ++ SI +NK+L FTL ++ + ICVS+T KEN
Sbjct:    5 IAMLCDFFYPQLGGVEFHIYHLSQKLIDLGHSVVIITHAYKDRVGVRHLTNGLKVYHVPFFVIFRETTFPTVFSTFPIIRNILLREQIQIVHSHGSASTFAHEGILHANTMGLRTVFTDHSLYGFNNLTSIWVNKLLTFTLTNIDRVICVSNTCKEN 161          
The following BLAST results are available for this feature:
BLAST of CF509768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PIGA_MOUSE6.157e-5660.63N-acetylglucosaminyl-phosphatidylinositol biosynth... [more]
PIGA_HUMAN1.050e-5558.75Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
GPI3_SCHPO2.421e-5259.62Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
GPI3_YEAST7.290e-4957.32Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
GPI3_YEAS77.290e-4957.32Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
GPI3_YEAS67.290e-4957.32Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
GPI3_YEAS17.290e-4957.32Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-276 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509768 ID=CF509768; Name=CF509768; organism=Citrus sinensis; type=EST; length=591bp
GGCCGGTCGCCGGAAATTTTGTTCCAATGAGAGGAGGTCTTAATTCATGG
AATCTTACTGCAATTTGATGCTGGGCTGTGAGAGATTTGGATTCATGGCT
AATCAGAAGCATAGAATTCTGATGGTCTCTGATTTTTTCTATCCCAACTT
TGGTGGTGTGGAGAATCACATATACTATTTGTCACAATGCCTGCTAAAGT
TTGGCCACAAGGTGGTGGTCATGACTCATGCTTATGGAAATCGTTCTGGT
GTGAGATACATGACTGGCGGCTTGAAAGTTTACTATGTACCATGGAGACC
ATTTATTATGCAGAATACACTGCCGACCTTCTATGGGACACTTCCAATTA
TAAGGACAATCCTTATTCGGGAAAAAATATCATTGGTGCATGGGCATCAA
GCCTTCTCAACTCTTTGTCACGAAGCTCTGATGCACGCTCGCACGATGGG
ATATAGAGTTGTGTTTACTGACCATTCTCTTTATGGGTTTGCCGATGTTG
GGAGCATCCACATGAACAAAGTATTGCAGTTTACTTTGGCAGATGTGAGC
CAGGCCATTTGTGTTTCGCACACAAGCAAAGAAAATACGGT
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