CF509776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509776 vs. ExPASy Swiss-Prot
Match: BMS1_YEAST (Ribosome biogenesis protein BMS1 OS=Saccharomyces cerevisiae GN=BMS1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.335e-28 Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = 2 Query: 245 KIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKAVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDMVL 511 +I KK+KLVG+P KIFK TA IKDMF+S +EVA+ EG ++TVSGIRG++K+A + EG R FED+ILMSD+V+ Sbjct: 927 EIVKKLKLVGFPYKIFKNTAFIKDMFSSAMEVARFEGAQIKTVSGIRGEIKRALSKP-------------EGHYRAAFEDKILMSDIVI 1002 HSP 2 Score: 58.5362 bits (140), Expect = 2.335e-28 Identity = 31/80 (38.75%), Postives = 42/80 (52.50%), Query Frame = 3 Query: 3 PIIVSIGWRRFQTTPVYSIEDRNGRYRMLKYTSRTHELPCHVLGSSCPSSNWVVAVQNLSNKQA--SFRITATAVVLEFN 236 P+++S+GWRRFQT P+Y+ D R RMLKYT G C + VQ ++N FRI AT +V E + Sbjct: 844 PLVLSLGWRRFQTLPIYTTTDSRTRTRMLKYTPEHTYCNAAFYGPLCSPNTPFCGVQIVANSDTGNGFRIAATGIVEEID 923
BLAST of CF509776 vs. ExPASy Swiss-Prot
Match: BMS1_SCHPO (Ribosome biogenesis protein BMS1 homolog OS=Schizosaccharomyces pombe GN=SPBC31E1.06 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.601e-17 Identity = 52/100 (52.00%), Postives = 62/100 (62.00%), Query Frame = 2 Query: 209 SNGSRA*VQPEAKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKAVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDMV 508 + GS + I KK+KL G P KIFK TA IK MF+S LEVA+ EG +RTVSGIRGQVKKA +E G+ R TFED+ILMSD+V Sbjct: 853 ATGSVLNIDQSTDIVKKLKLTGVPYKIFKNTAFIKKMFSSPLEVAKFEGANIRTVSGIRGQVKKAVDQEHGH-------------FRATFEDKILMSDIV 939
BLAST of CF509776 vs. ExPASy Swiss-Prot
Match: BMS1_HUMAN (Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens GN=BMS1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.091e-17 Identity = 55/130 (42.31%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 122 PRSGVLLPLLKLGSCCPEF-IQQTGFI*DYSNGSRA*VQPEAKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKAVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDMV 508 P+ L + + P+F I TG + D + KI KK+KL G+P KIFK T+ IK MF S LEVA+ EG +RTVSGIRGQ+KKA + EG R +FED++LMSD+V Sbjct: 988 PQGTGFLAIQSVSGIMPDFRIAATGVVLD--------LDKSIKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAP-------------EGAFRASFEDKLLMSDIV 1096 HSP 2 Score: 75.485 bits (184), Expect = 1.832e-13 Identity = 37/79 (46.84%), Postives = 48/79 (60.76%), Query Frame = 3 Query: 3 PIIVSIGWRRFQTTPVYSIEDRNGRYRMLKYTSRTHELPCHVLGSSCPSSNWVVAVQNLSNKQASFRITATAVVLEFNQ 239 PII S+GWRRFQT P+Y IED NGR R+LKYT + G P +A+Q++S FRI AT VVL+ ++ Sbjct: 941 PIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAAFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDK 1019 The following BLAST results are available for this feature:
BLAST of CF509776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509776 ID=CF509776; Name=CF509776; organism=Citrus sinensis; type=EST; length=543bpback to top |