CF509779

Overview
NameCF509779
Unique NameCF509779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1)

HSP 1 Score: 395.201 bits (1014), Expect = 1.709e-109
Identity = 189/230 (82.17%), Postives = 211/230 (91.74%), Query Frame = 3
Query:    6 SVEKAIEEKRLFILDYHDLLLPFIEKINSLPD--RKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            ++EKA+EEKRLF++DYHD+LLPF+EKINS+ +  RKTYASRT+FFY+K G LRPLAIELSLPPT  S +NK +YTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWL THASMEPYIIAT+RQLS+MHP+YKLLHPHMRYTLEINA AR+SLINGGGIIE+ F+PG+YAMELSSAAYKS WRFDME LPADL+RRGMAEED S   GVRLVI+DYPYAADGLLIW AIK
Sbjct:  471 TIEKALEEKRLFLVDYHDILLPFVEKINSIKEDPRKTYASRTIFFYSKNGALRPLAIELSLPPTAES-ENKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHASMEPYIIATNRQLSTMHPVYKLLHPHMRYTLEINARARKSLINGGGIIESCFTPGKYAMELSSAAYKSMWRFDMEGLPADLVRRGMAEEDSSAECGVRLVIDDYPYAADGLLIWKAIK 699          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 8.256e-88
Identity = 149/228 (65.35%), Postives = 188/228 (82.46%), Query Frame = 3
Query:    6 SVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            SV++A+EE RL++LDYHD+ LPF+++IN+L  RK YA+RT+FF  + G L+P+AIELSLPP     ++K + T   DAT++W+W+LAKAHV SNDAGVHQLVNHWL THA +EP+I+A HRQLS+MHPI+KLL PHMRYTLEINALARQSLI+  G+IE  F+ G Y ME+S+AAYKS WRFDME LPADL+RRGMA  D + P G++L+IEDYPYA DGLL+W AI+
Sbjct:  475 SVQQALEENRLYMLDYHDIFLPFLDRINALDGRKAYATRTIFFLTRLGTLKPVAIELSLPPHGPKHRSKRVLTPPVDATSNWMWQLAKAHVSSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQSLISADGVIEGGFTAGAYGMEMSAAAYKSSWRFDMEGLPADLIRRGMAIPDATQPHGLKLLIEDYPYANDGLLLWSAIQ 702          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2)

HSP 1 Score: 322.398 bits (825), Expect = 1.408e-87
Identity = 148/229 (64.63%), Postives = 185/229 (80.79%), Query Frame = 3
Query:    3 LSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPP-TRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAI 686
            +SV++A+E  RL++LDYHD+ LPF+++IN+   RK Y +R VFF   AG L+P+AIEL LPP T    + K ++T   DAT++W+W+LAKAHVCSNDAGVHQL+NHWL THA MEP+IIA HRQ+S+MHPI+KLL PHMRYTL+INALARQ LING G+IE+ F+PG   ME+S+ AY+  WR D E LPADL+RRGMA EDPS P G+RL+IEDYPYAADGLL+W AI
Sbjct:  454 MSVQEAVEGSRLYMLDYHDIFLPFLDRINAQDGRKAYGTRAVFFLTAAGTLKPIAIELCLPPMTDGCKRAKRVFTPPADATSNWLWQLAKAHVCSNDAGVHQLINHWLRTHACMEPFIIAAHRQMSAMHPIFKLLKPHMRYTLKINALARQILINGDGVIESGFTPGNVCMEMSAFAYRELWRLDQEGLPADLIRRGMAVEDPSQPHGLRLLIEDYPYAADGLLLWSAI 682          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2)

HSP 1 Score: 319.701 bits (818), Expect = 9.128e-87
Identity = 145/230 (63.04%), Postives = 191/230 (83.04%), Query Frame = 3
Query:    3 LSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTR-SSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            L+V++A++E +LFI+DYHD  LPF+++IN++  RK YA+RT+FF  +AG L+P+AIELSLPP +   P+   + T  +DAT++W+W LAKAHV SNDAGVHQLVNHWL THA+MEP+I+A HR +S+MHPI+KLLHPHMRYTLEINALARQSLIN  G+IE+ F+PG  + E+S+A Y++ WRFD+E LP+DL+RRG+A ED + P GVRL+IEDYPYA DGLL+W AI+
Sbjct:  468 LTVQQAMDEAKLFIVDYHDAYLPFLDRINAIDGRKAYATRTIFFLTEAGTLKPIAIELSLPPAKPGEPRPSKVLTPPYDATSNWLWMLAKAHVSSNDAGVHQLVNHWLRTHATMEPFILAAHRHMSAMHPIFKLLHPHMRYTLEINALARQSLINADGVIESCFTPGPVSGEISAAYYRNHWRFDLEGLPSDLIRRGVAVEDATQPHGVRLLIEDYPYANDGLLLWSAIR 697          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.009e-85
Identity = 146/230 (63.48%), Postives = 191/230 (83.04%), Query Frame = 3
Query:    3 LSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQ-NKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            L+V++A+E  RLF++DYHD+ LPF+++IN+L  RK YA+RT+ F  + G L+P+AIELSLP   SS Q +K + T   DAT++W+W+LAKAHV SNDAGVHQLVNHWL THA +EP+I+A HRQLS+MHPI+KLL PHMRYTLEINA+ARQ+LI+  G+IE+ F+ G+Y +E+SSAAYK+ WRFDME LPADL+RRGMA  DP+ P G++L++EDYPYA DGLL+W AI+
Sbjct:  480 LTVQQALETNRLFMVDYHDIYLPFLDRINALDGRKAYATRTILFLTRLGTLKPIAIELSLPSQSSSNQKSKRVVTPPVDATSNWMWQLAKAHVGSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINAVARQTLISADGVIESCFTAGQYGLEISSAAYKNKWRFDMEGLPADLIRRGMAVPDPTQPHGLKLLVEDYPYANDGLLLWSAIQ 709          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 1.903e-84
Identity = 142/229 (62.01%), Postives = 180/229 (78.60%), Query Frame = 3
Query:    3 LSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            ++V++A++ KRLF+LDYHDLLLP++ K+  L +   YASRT+FF +    LRP+AIEL+ PP  + PQ K ++T G+DAT+ W+W LAK H  S+DAG HQL++HWL THA  EPYIIA +RQLS+MHPIY+LLHPH RYT+EINA ARQSL+NGGGIIE  F PG+YA+ELSSA Y   WRFD E LPADL++RG+AEED +   GVRL I DYP+A DGL++W AIK
Sbjct:  450 MTVDEALKNKRLFVLDYHDLLLPYVNKVRELNNTTLYASRTLFFLSDDSTLRPVAIELTCPPNINKPQWKQVFTPGYDATSCWLWNLAKTHAISHDAGYHQLISHWLRTHACTEPYIIAANRQLSAMHPIYRLLHPHFRYTMEINARARQSLVNGGGIIETCFWPGKYALELSSAVYGKLWRFDQEGLPADLIKRGLAEEDKTAEHGVRLTIPDYPFANDGLILWDAIK 678          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 6.769e-82
Identity = 143/229 (62.45%), Postives = 176/229 (76.86%), Query Frame = 3
Query:    3 LSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            ++VE+AI +KRLF+LD+HDL LP++ KI SL     Y SRT+FF    G LR LAIEL+ P + S PQ + ++T   D T  W+W++AKAHV ++DAG H+L+ HWL TH ++EPYIIA +RQLS MHPIY+LLHPH RYT+ INALAR  LI+  GIIE SFSP +Y+MELSS AY   WRFDMEALPADL+RRGMAEEDP+   G+RL IEDYP+A DGLLIW AIK
Sbjct:  494 MTVEEAISQKRLFMLDFHDLFLPYVHKIRSLKHTTMYGSRTIFFLTDDGTLRLLAIELTRPASPSQPQWRQVFTPSTDTTKSWLWRMAKAHVRAHDAGHHELITHWLRTHCAVEPYIIAANRQLSEMHPIYQLLHPHFRYTMRINALARSRLISAAGIIELSFSPQKYSMELSSVAYDKLWRFDMEALPADLVRRGMAEEDPTAEHGLRLAIEDYPFANDGLLIWDAIK 722          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 298.13 bits (762), Expect = 2.844e-80
Identity = 141/229 (61.57%), Postives = 176/229 (76.86%), Query Frame = 3
Query:    3 LSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            ++VE+AI +KRLF+LD+HDL LP++ KI SL     Y SRTVFF    G L+ LAIEL+ P + S PQ + ++T   DAT  W+W++AKAHV ++DAG H+L+ HWL TH ++EPYIIA +RQLS MHPIY+LL PH RYT+ INA AR +LI+ GGIIE SFSP +Y+MELSS AY   WRFD EALPADL+RRGMAEEDP+   G++L IEDYP+A DGLLIW AIK
Sbjct:  477 MTVEEAISQKRLFMLDFHDLFLPYVHKIRSLDHTTMYGSRTVFFLTDDGTLQLLAIELTRPASPSQPQWRQVFTPSTDATMSWLWRMAKAHVRAHDAGHHELITHWLRTHCAVEPYIIAANRQLSEMHPIYQLLRPHFRYTMRINARARSALISAGGIIERSFSPQKYSMELSSVAYDKLWRFDTEALPADLVRRGMAEEDPTAEHGLKLAIEDYPFANDGLLIWDAIK 705          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 5.930e-78
Identity = 136/229 (59.39%), Postives = 175/229 (76.42%), Query Frame = 3
Query:    3 LSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            ++VE+A+E+KRLF+LDYHD+ LP++ ++  LPD   Y SRTVFF +  G L PLAIEL+ P + + PQ K  +THG DAT  W+WKLAKAHV ++D G HQLV+HWL THA +EPYIIAT+RQLS MHP+Y+LLHPH RYT+EINALAR++LIN  GIIE +F  G+Y++ELSS AY + W+F+ EALP DL+ RG+A         + L I+DYPYA DGLLIW +IK
Sbjct:  452 MTVEEAMEKKRLFLLDYHDVFLPYVHRVRELPDTTLYGSRTVFFLSDEGTLMPLAIELTRPQSPTKPQWKRAFTHGSDATESWLWKLAKAHVLTHDTGYHQLVSHWLRTHACVEPYIIATNRQLSRMHPVYRLLHPHFRYTMEINALAREALINADGIIEEAFLAGKYSIELSSVAYGAAWQFNTEALPEDLINRGLAVRRDD--GELELAIKDYPYADDGLLIWGSIK 678          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 6.556e-77
Identity = 135/231 (58.44%), Postives = 172/231 (74.46%), Query Frame = 3
Query:    3 LSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDA--TTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            ++ ++A++ K+LF+LDYHDLLLP++ K+  L     Y SR +FF    G LRP+AIEL+ P ++  PQ + ++T G D   T  W+W+LAKAH+ ++DAGVHQLV+HWL THA  EPYIIA +RQLS MHP+Y+LLHPH R+T+EINA AR  LIN GGIIE SF PG Y++ELSS AY   WRFDMEALP DL+RRGMA  +P+    + L IEDYPYA DGLL+W AIK
Sbjct:  481 MTADEAVQNKKLFMLDYHDLLLPYVHKVRKLDGTTLYGSRALFFLTADGTLRPIAIELTRPKSKKKPQWRQVFTPGCDGSVTGSWLWQLAKAHILAHDAGVHQLVSHWLRTHACTEPYIIAANRQLSQMHPVYRLLHPHFRFTMEINAQARAMLINAGGIIEGSFVPGEYSLELSSVAYDQQWRFDMEALPEDLIRRGMAVRNPN--GELELAIEDYPYANDGLLVWDAIK 709          
The following BLAST results are available for this feature:
BLAST of CF509779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
LOX6_ARATH1.709e-10982.17Lipoxygenase 6, choloroplastic OS=Arabidopsis thal... [more]
LOX3_ARATH8.256e-8865.35Lipoxygenase 3, chloroplastic OS=Arabidopsis thali... [more]
LOX5_ORYSJ1.408e-8764.63Putative lipoxygenase 5 OS=Oryza sativa subsp. jap... [more]
LOX6_ORYSJ9.128e-8763.04Probable lipoxygenase 6 OS=Oryza sativa subsp. jap... [more]
LOX4_ARATH1.009e-8563.48Lipoxygenase 4, chloroplastic OS=Arabidopsis thali... [more]
LOX2_ARATH1.903e-8462.01Lipoxygenase 2, chloroplastic OS=Arabidopsis thali... [more]
LOXC2_ORYSJ6.769e-8262.45Probable lipoxygenase 8, chloroplastic OS=Oryza sa... [more]
LOXC1_ORYSJ2.844e-8061.57Lipoxygenase 7, chloroplastic OS=Oryza sativa subs... [more]
LOX23_HORVU5.930e-7859.39Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare... [more]
LOX21_HORVU6.556e-7758.44Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-287 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509779 ID=CF509779; Name=CF509779; organism=Citrus sinensis; type=EST; length=691bp
GACTGAGCGTGGAAAAGGCTATTGAGGAGAAGAGATTGTTTATACTTGAT
TATCATGACTTGCTGCTGCCATTTATCGAGAAAATAAACTCCTTGCCAGA
TAGAAAAACATATGCCTCTAGGACAGTTTTCTTCTATAACAAGGCTGGCA
TGCTGAGGCCACTAGCTATAGAGCTATCCCTTCCTCCAACACGTTCTTCG
CCTCAGAATAAACACATTTACACTCATGGGCATGATGCTACAACACATTG
GATTTGGAAGCTGGCCAAAGCTCATGTCTGTTCAAATGATGCTGGAGTCC
ACCAACTAGTAAATCACTGGTTGATGACTCATGCTTCTATGGAGCCTTAT
ATAATTGCAACACACAGACAGCTTAGTTCAATGCACCCCATTTATAAGTT
GCTTCATCCTCACATGCGCTACACGCTAGAAATTAATGCACTTGCACGGC
AAAGTTTAATAAACGGAGGGGGTATAATTGAGGCTTCTTTCAGCCCAGGA
AGGTATGCCATGGAGCTAAGCTCTGCAGCCTACAAGAGTTTTTGGAGGTT
TGACATGGAGGCATTGCCTGCAGATCTTTTGCGCAGGGGTATGGCTGAGG
AGGATCCTTCAATGCCTAGCGGTGTAAGACTTGTGATTGAAGACTACCCG
TATGCAGCAGATGGGCTTCTTATCTGGTGTGCTATAAAGAG
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