CF509781

Overview
NameCF509781
Unique NameCF509781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length435
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509781 vs. ExPASy Swiss-Prot
Match: TPS5_ARATH (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 7.690e-25
Identity = 51/81 (62.96%), Postives = 66/81 (81.48%), Query Frame = 2
Query:    2 IVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLA 244
            +V + L++TM+ +GK  DF+LC+GDDRSDEDMFE I  A   P++  +AE+FACTVGQKPS AKYYLDDTAE+I +L+GLA
Sbjct:  760 LVAERLLTTMQEKGKLLDFILCVGDDRSDEDMFEVIMSAKDGPALSPVAEIFACTVGQKPSKAKYYLDDTAEIIRMLDGLA 840          
BLAST of CF509781 vs. ExPASy Swiss-Prot
Match: TPS6_ARATH (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 8.502e-24
Identity = 49/82 (59.76%), Postives = 63/82 (76.83%), Query Frame = 2
Query:    2 IVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLAT 247
            ++ + ++S M+ RG  P+FVLCIGDDRSDEDMFE I  +   PS+   AE+FACTVGQKPS AKYYLDDT E++ L+ GLA+
Sbjct:  771 LIARRMLSMMQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKAKYYLDDTTEIVRLMHGLAS 852          
BLAST of CF509781 vs. ExPASy Swiss-Prot
Match: TPS11_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana GN=TPS11 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.110e-23
Identity = 59/88 (67.05%), Postives = 70/88 (79.55%), Query Frame = 2
Query:    5 VVKNLISTMRS-RGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATESVHSK 265
            VV++LI+TMR+ +GK PDF+LCIGDDRSDEDMF+SI +   D S  G+ EVFACTVGQKPS AKYYLDDT  VI +LE LA+ S  SK
Sbjct:  753 VVEHLIATMRNTKGKRPDFLLCIGDDRSDEDMFDSIVKH-QDVSSIGLEEVFACTVGQKPSKAKYYLDDTPSVIKMLEWLASASDGSK 839          
BLAST of CF509781 vs. ExPASy Swiss-Prot
Match: TPS9_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana GN=TPS9 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.094e-22
Identity = 51/95 (53.68%), Postives = 65/95 (68.42%), Query Frame = 2
Query:    2 IVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATESVHSKSASYQES 286
            + V+ +I  M   G  PD V+CIGDDRSDEDMFESI   V +P +P   E+FACTVG+KPS AKY+LDD ++V+ LL GLA  +  SK    Q+S
Sbjct:  760 LAVEKVIHQMVEDGNPPDMVMCIGDDRSDEDMFESILSTVTNPDLPMPPEIFACTVGRKPSKAKYFLDDVSDVLKLLGGLAAATSSSKPEYQQQS 854          
BLAST of CF509781 vs. ExPASy Swiss-Prot
Match: TPS7_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 5.158e-21
Identity = 55/98 (56.12%), Postives = 68/98 (69.39%), Query Frame = 2
Query:    5 VVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATESVHSKSASYQESHEDL 298
            V + + S+M  +GK  DFVLCIGDDRSDEDMFE+I  A++   +   A VFACTVGQKPS AKYYLDDT EV  +LE LA E+  + + S +E  E L
Sbjct:  755 VSEKIFSSMAGKGKPVDFVLCIGDDRSDEDMFEAIGNAMSKRLLCDNALVFACTVGQKPSKAKYYLDDTTEVTCMLESLA-EASEASNFSMRELDEAL 851          
BLAST of CF509781 vs. ExPASy Swiss-Prot
Match: TPS8_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 OS=Arabidopsis thaliana GN=TPS8 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.799e-21
Identity = 49/91 (53.85%), Postives = 62/91 (68.13%), Query Frame = 2
Query:    2 IVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATESVHSKSAS 274
            +  + +I  M  RG+ P+ V+CIGDDRSDEDMFESI   V +P +    EVFACTVG+KPS AKY+LDD A+V+ LL GL   S   K +S
Sbjct:  755 LAAEKVIREMVERGEPPEMVMCIGDDRSDEDMFESILSTVTNPELLVQPEVFACTVGRKPSKAKYFLDDEADVLKLLRGLGDSSSSLKPSS 845          
BLAST of CF509781 vs. ExPASy Swiss-Prot
Match: TPS10_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.659e-19
Identity = 44/84 (52.38%), Postives = 61/84 (72.62%), Query Frame = 2
Query:    2 IVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATES 253
            +V   ++S M   G +PDFV+CIGDDRSDE+MFE+I   ++  S     E+FACTVG+KPS AKY+LD+ ++V+ LL+GLA  S
Sbjct:  760 LVTGKILSRMLEDGIAPDFVVCIGDDRSDEEMFENISTTLSAQSSSMSTEIFACTVGRKPSKAKYFLDEVSDVVKLLQGLANTS 843          
The following BLAST results are available for this feature:
BLAST of CF509781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
TPS5_ARATH7.690e-2562.96Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS6_ARATH8.502e-2459.76Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS11_ARATH1.110e-2367.05Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS9_ARATH2.094e-2253.68Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS7_ARATH5.158e-2156.12Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS8_ARATH8.799e-2153.85Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS10_ARATH1.659e-1952.38Probable alpha,alpha-trehalose-phosphate synthase ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-289 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509781 ID=CF509781; Name=CF509781; organism=Citrus sinensis; type=EST; length=435bp
CATTGTTGTAAAAAACTTGATTTCAACTATGCGAAGTAGGGGGAAGTCTC
CAGATTTTGTGCTGTGCATAGGGGATGACCGTTCTGATGAAGATATGTTC
GAGAGCATTGAGCAAGCTGTTGCCGATCCATCGGTACCAGGGATTGCAGA
AGTATTTGCGTGTACAGTCGGTCAGAAACCGAGCATGGCTAAATATTACC
TTGATGATACTGCAGAAGTCATAAACTTGCTTGAAGGCCTTGCTACAGAA
TCTGTACATTCTAAGTCGGCATCCTACCAGGAATCACATGAAGACTTGTT
ACTTTGAATAAAAGGTTAGAATGAACATAGTGAAAAAGTCAAATCTGGGC
TTAGGGCAATTGATGATACAGATATCCTTGTACAGAAAAATACTTTTTTC
TTTTCTTTTTTTTTTTATAACTTTTACAGGGTCAT
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