CF509782

Overview
NameCF509782
Unique NameCF509782
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length271
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13176 contig Csv1_Contig13176:537..807. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 4.228e-46
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ
Sbjct:  102 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 190          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.776e-44
Identity = 84/89 (94.38%), Postives = 88/89 (98.88%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            FGSLTQAS IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAMARA+VFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ
Sbjct:  102 FGSLTQASTIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMARAKVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 190          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1_WHEAT (Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 3.957e-44
Identity = 84/89 (94.38%), Postives = 87/89 (97.75%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            FGSLTQAS+IRVGSYNGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAMARARV DIDLQKQLRPYME MVPLPGIYDPDFIAANQ
Sbjct:  102 FGSLTQASSIRVGSYNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMARARVLDIDLQKQLRPYMEHMVPLPGIYDPDFIAANQ 190          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 6.750e-44
Identity = 83/89 (93.26%), Postives = 87/89 (97.75%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            FGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAM RARVFDIDLQKQLRPYME MVPLPGIYDPDFIAANQ
Sbjct:  104 FGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMTRARVFDIDLQKQLRPYMEHMVPLPGIYDPDFIAANQ 192          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 8.816e-44
Identity = 82/89 (92.13%), Postives = 88/89 (98.88%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            FGSLTQAS+IRVGSYNGEEIYAPFKS+LPMVNP+D+VFGGWDISDMNLADAMARARV DIDLQKQLRPYME+M+PLPGIYDPDFIAANQ
Sbjct:  102 FGSLTQASSIRVGSYNGEEIYAPFKSLLPMVNPEDVVFGGWDISDMNLADAMARARVLDIDLQKQLRPYMENMIPLPGIYDPDFIAANQ 190          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.151e-43
Identity = 83/89 (93.26%), Postives = 87/89 (97.75%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            FGSLTQAS IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDIS MNLADAMARA+VFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ
Sbjct:  102 FGSLTQASTIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISGMNLADAMARAKVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 190          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 5.714e-43
Identity = 81/89 (91.01%), Postives = 88/89 (98.88%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            FGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAMARARV DIDLQKQLRPYME++VPLPGI+DPDFIAANQ
Sbjct:  103 FGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMARARVLDIDLQKQLRPYMENIVPLPGIFDPDFIAANQ 191          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 5.714e-43
Identity = 81/89 (91.01%), Postives = 88/89 (98.88%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            FGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAMARARV DIDLQKQLRPYME++VPLPGI+DPDFIAANQ
Sbjct:  103 FGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMARARVLDIDLQKQLRPYMENIVPLPGIFDPDFIAANQ 191          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 9.747e-43
Identity = 81/89 (91.01%), Postives = 86/89 (96.63%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            +GSLTQAS IRVGSYNGEEIYAPFKS+LPMVNPDD+VFGGWDIS+MNLADAM RA+V DIDLQKQLRPYMESMVPLPGIYDPDFIAANQ
Sbjct:  102 YGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPDDLVFGGWDISNMNLADAMTRAKVLDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 190          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 1.273e-42
Identity = 81/89 (91.01%), Postives = 86/89 (96.63%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            +GSLTQAS IRVGSYNGEEIYAPFKS+LPMVNPDDIVFGGWDIS+MNLAD+M RA+V DIDLQKQLRPYMESMVPLPGIYDPDFIAANQ
Sbjct:  102 YGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPDDIVFGGWDISNMNLADSMTRAKVLDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 190          
The following BLAST results are available for this feature:
BLAST of CF509782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_CITPA4.228e-46100.00Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_NICPA1.776e-4494.38Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]
INO1_WHEAT3.957e-4494.38Inositol-3-phosphate synthase OS=Triticum aestivum... [more]
INO1_MESCR6.750e-4493.26Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO2_ARATH8.816e-4492.13Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]
INO1_TOBAC1.151e-4393.26Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO1_PHAVU5.714e-4391.01Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_ARATH5.714e-4391.01Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]
INO1_ORYSJ9.747e-4391.01Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_MAIZE1.273e-4291.01Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-290 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_C04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509782 ID=CF509782; Name=CF509782; organism=Citrus sinensis; type=EST; length=271bp
ATTTTGGTTCACTTACCCAAGCATCAGCAATTAGAGTTGGGTCTTACAAT
GGAGAGGAGATTTATGCTCCATTCAAGAGCATTCTCCCTATGGTGAACCC
AGATGACATTGTGTTTGGAGGATGGGACATTAGTGACATGAACTTGGCTG
ATGCCATGGCCAGGGCTAGAGTGTTTGATATTGATCTTCAAAAGCAACTT
AGGCCTTACATGGAATCAATGGTCCCACTTCCTGGAATCTATGACCCTGA
TTTCATTGCTGCCAATCAAGG
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