CF509789
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509789 vs. ExPASy Swiss-Prot
Match: GLR37_ARATH (Glutamate receptor 3.7 OS=Arabidopsis thaliana GN=GLR3.7 PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 1.716e-31 Identity = 63/101 (62.38%), Postives = 80/101 (79.21%), Query Frame = 2 Query: 62 DWKLQNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEE-HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMAANDVFD 361 D KL +ITWPGG E PRGWVIAD+A PL+I VPRR SFV FVTEE + SH++QG+CID+ +EALK VPY VPY FE FG+G S+P+Y+ L++M + V+D Sbjct: 431 DEKLGDITWPGGGREKPRGWVIADSADPLKIVVPRRVSFVEFVTEEKNSSHRIQGFCIDVFIEALKFVPYSVPYIFEPFGNGHSSPNYNHLIQMVTDGVYD 531
BLAST of CF509789 vs. ExPASy Swiss-Prot
Match: GLR32_ARATH (Glutamate receptor 3.2 OS=Arabidopsis thaliana GN=GLR3.2 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 7.459e-27 Identity = 59/112 (52.68%), Postives = 74/112 (66.07%), Query Frame = 2 Query: 26 SLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMAANDVFD 361 SL K + S + L N+TWPGG +ETPRGWV +N R LRIGVP RASF FV+ S+KVQGY ID+ A+KL+ Y VP++F LFGDGL NP+++ V VFD Sbjct: 428 SLYKKLSNRSSSNQHLNNVTWPGGTSETPRGWVFPNNGRRLRIGVPDRASFKEFVSRLDGSNKVQGYAIDVFEAAVKLISYPVPHEFVLFGDGLKNPNFNEFVNNVTIGVFD 539
BLAST of CF509789 vs. ExPASy Swiss-Prot
Match: GLR31_ARATH (Glutamate receptor 3.1 OS=Arabidopsis thaliana GN=GLR3.1 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 9.118e-25 Identity = 55/111 (49.55%), Postives = 73/111 (65.77%), Query Frame = 2 Query: 26 SLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEH-DSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMAANDV 355 S K + S + L ++TWPGG + TPRGW+ +N R LRIGVP RASF FV+ + S+KVQGYCID+ A+KL+ Y VP++F FGDGL+NP+Y+ LV V Sbjct: 426 SFYSKPPNRSSSNQHLNSVTWPGGTSVTPRGWIFRNNGRRLRIGVPDRASFKDFVSRVNGSSNKVQGYCIDVFEAAVKLLSYPVPHEFIFFGDGLTNPNYNELVNKVTTGV 536
BLAST of CF509789 vs. ExPASy Swiss-Prot
Match: GLR35_ARATH (Glutamate receptor 3.5 OS=Arabidopsis thaliana GN=GLR3.5 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 3.831e-23 Identity = 48/112 (42.86%), Postives = 71/112 (63.39%), Query Frame = 2 Query: 26 SLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMAANDVFD 361 +L K + S D +L I WPG + PRGWV +N +PL+IGVP R S+ + +++ + V+G+CIDI A++L+PY VP + L+GDG NPSYD L+ A ++FD Sbjct: 447 TLYSKPSNTSAKDQRLNEIIWPGEVIKPPRGWVFPENGKPLKIGVPNRVSYKNYASKDKNPLGVKGFCIDIFEAAIQLLPYPVPRTYILYGDGKKNPSYDNLISEVAANIFD 558
BLAST of CF509789 vs. ExPASy Swiss-Prot
Match: GLR34_ARATH (Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 8.534e-23 Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 2 Query: 53 SQLDWKLQNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMAANDVFD 361 S + +L+ I +PG T+ PRGWV +N +PLRIGVP R S+ +V+++ + V+GYCID+ A++L+PY VP + L+GDG NPSYD LV D FD Sbjct: 463 STANQRLKGIIYPGEVTKPPRGWVFPNNGKPLRIGVPNRVSYTDYVSKDKNPPGVRGYCIDVFEAAIELLPYPVPRTYILYGDGKRNPSYDNLVNEVVADNFD 565
BLAST of CF509789 vs. ExPASy Swiss-Prot
Match: GLR31_ORYSJ (Glutamate receptor 3.1 OS=Oryza sativa subsp. japonica GN=GLR3.1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.356e-19 Identity = 43/112 (38.39%), Postives = 65/112 (58.04%), Query Frame = 2 Query: 26 SLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMAANDVFD 361 +L K + ++ KL ++ WPG PRGWV +N ++IGVP R S+ FV+ + ++ V+G CID+ + A+ L+ Y VPY+F FG+ NPSY L+ D FD Sbjct: 429 TLYKKPANRTRETQKLHDVIWPGETINKPRGWVFPNNGNEIKIGVPDRVSYRQFVSVDSETGMVRGLCIDVFVAAINLLAYPVPYRFVPFGNNRENPSYSELINKIITDDFD 540
BLAST of CF509789 vs. ExPASy Swiss-Prot
Match: GLR33_ARATH (Glutamate receptor 3.3 OS=Arabidopsis thaliana GN=GLR3.3 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.666e-18 Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = 2 Query: 68 KLQNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSHKV-QGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMAANDVFD 361 KL+++ WPG PRGWV ++N + L+IGVP R S+ FV++ + + +G+CID+ A+ L+PY VP KF +G+G NPSY +V+M FD Sbjct: 440 KLKHVIWPGETFTKPRGWVFSNNGKELKIGVPLRVSYKEFVSQIRGTENMFKGFCIDVFTAAVNLLPYAVPVKFIPYGNGKENPSYTHMVEMITTGNFD 538
BLAST of CF509789 vs. ExPASy Swiss-Prot
Match: GLR36_ARATH (Glutamate receptor 3.6 OS=Arabidopsis thaliana GN=GLR3.6 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.710e-18 Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 68 KLQNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMAANDVFD 361 KL ++ WPG + PRGWV ++N R LRIGVP R F V+ + + + G+C+D+ + A+ L+PY VP++ FG+G NPS LV++ V+D Sbjct: 432 KLHSVVWPGHSIKIPRGWVFSNNGRHLRIGVPNRYRFEEVVSVKSNG-MITGFCVDVFIAAINLLPYAVPFELVAFGNGHDNPSNSELVRLITTGVYD 528
BLAST of CF509789 vs. ExPASy Swiss-Prot
Match: GLR26_ARATH (Glutamate receptor 2.6 OS=Arabidopsis thaliana GN=GLR2.6 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.366e-12 Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 2 Query: 35 GKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSH----KVQGYCIDILLEALKLVPYDVPYKFELF--GDGLSNPSYDGLV 334 G +SHS +L+ I WPG P+GW NA+ LRI VP++ F FV D++ + G+CID+ A++ +PY VPY++ F DG SYD +V Sbjct: 427 GIKISHSS--HRLRPIIWPGDTIFVPKGWEFPTNAKKLRIAVPKKDGFNNFVEVTKDANTNAPTITGFCIDVFDTAMRQMPYAVPYEYIPFETPDGKPRGSYDEMV 530
BLAST of CF509789 vs. ExPASy Swiss-Prot
Match: GLR25_ARATH (Glutamate receptor 2.5 OS=Arabidopsis thaliana GN=GLR2.5 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.156e-11 Identity = 41/109 (37.61%), Postives = 56/109 (51.38%), Query Frame = 2 Query: 26 SLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSH----KVQGYCIDILLEALKLVPYDVPYKFELFG--DGLSNPSYDGLV 334 SL+ VSHS +L+ I WPG P+GW NA+ LRI VP++ F FV D + V G+CID+ + +PY V Y++ F DG SYD +V Sbjct: 420 SLRVDKVSHSSR--RLRPIIWPGDTIFVPKGWEFPTNAKKLRIAVPKKDGFNNFVEVTKDENTNVPTVTGFCIDVFNTVMSQMPYAVSYEYIPFDTPDGKPRGSYDEMV 526 The following BLAST results are available for this feature:
BLAST of CF509789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509789 ID=CF509789; Name=CF509789; organism=Citrus sinensis; type=EST; length=362bpback to top |