CF509801

Overview
NameCF509801
Unique NameCF509801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3352 contig Csv1_Contig3352:167..592. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 8.557e-71
Identity = 127/140 (90.71%), Postives = 135/140 (96.43%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            MK+EEKDLMG+ LMKRVMQTWLPASSALLEMMI HLPSP+TAQ+YRVENLYEGP+DD YA AIRNCDP GPLMLYVSKMIPASDKGRFFAFGRVF+GKVSTG+KVRIMGPNYVPGEKKDLYVK+VQRTVIWMGKKQETVE
Sbjct:  305 MKTEEKDLMGRPLMKRVMQTWLPASSALLEMMIHHLPSPATAQRYRVENLYEGPMDDVYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFAGKVSTGMKVRIMGPNYVPGEKKDLYVKNVQRTVIWMGKKQETVE 444          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 4.707e-61
Identity = 108/140 (77.14%), Postives = 128/140 (91.43%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            +K E+++LMGK LMKRVMQTWLPA  ALLEMMI+HLPSP+ AQKYRV+ LYEGPLDD YA A+RNCD +GPLM+YVSKMIPA+DKGRF+AFGRVFSG+++TG KVRIMGPNYVPG+KKDLYVK+VQRTV+ MG++QE VE
Sbjct:  307 LKPEDRELMGKPLMKRVMQTWLPAHEALLEMMIWHLPSPAKAQKYRVDVLYEGPLDDTYATAVRNCDADGPLMMYVSKMIPAADKGRFYAFGRVFSGRIATGRKVRIMGPNYVPGQKKDLYVKTVQRTVLCMGRRQEAVE 446          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_DROME (Elongation factor 2 OS=Drosophila melanogaster GN=Ef2b PE=1 SV=4)

HSP 1 Score: 204.142 bits (518), Expect = 1.793e-52
Identity = 92/141 (65.25%), Postives = 118/141 (83.69%), Query Frame = 2
Query:    2 TMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            T+K E+KD  GKAL+K VM+TWLPA  ALL+M+  HLPSP  AQKYR+E LYEGP DD+ A A+++CDP+GPLM+Y+SKM+P SDKGRF+AFGRVF+GKV+TG K RIMGPNY PG+K+DLY K++QRT++ MG+  E +E
Sbjct:  308 TLKHEDKDKDGKALLKTVMRTWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIAVKSCDPDGPLMMYISKMVPTSDKGRFYAFGRVFAGKVATGQKCRIMGPNYTPGKKEDLYEKAIQRTILMMGRYVEAIE 448          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_CAEEL (Elongation factor 2 OS=Caenorhabditis elegans GN=eft-2 PE=2 SV=4)

HSP 1 Score: 202.986 bits (515), Expect = 3.994e-52
Identity = 92/140 (65.71%), Postives = 116/140 (82.86%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            + ++EKDL GK LMK  M+ WLPA   +L+M+ FHLPSP TAQKYR+E LYEGP DD+ A AI+ CDPNGPLM+Y+SKM+P SDKGRF+AFGRVFSGKV+TG+K RI GPNYVPG+K+DLY K++QRT++ MG+  E +E
Sbjct:  317 LANDEKDLEGKPLMKVFMRKWLPAGDTMLQMIAFHLPSPVTAQKYRMEMLYEGPHDDEAAVAIKTCDPNGPLMMYISKMVPTSDKGRFYAFGRVFSGKVATGMKARIQGPNYVPGKKEDLYEKTIQRTILMMGRFIEPIE 456          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_SCHPO (Elongation factor 2 OS=Schizosaccharomyces pombe GN=eft1 PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 8.897e-52
Identity = 92/141 (65.25%), Postives = 118/141 (83.69%), Query Frame = 2
Query:    2 TMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            T+K +EK+L GKAL+K VM+ +LPA+ AL+EM++ HLPSP TAQ+YR E LYEGP+DD+ A  IRNCD N PLM+YVSKM+P SD+GRF+AFGRVFSG V +GLKVRI GPNYVPG+K DL++K++QRTV+ MG + E +E
Sbjct:  306 TIKPDEKELEGKALLKVVMRKFLPAADALMEMIVLHLPSPKTAQQYRAETLYEGPMDDECAVGIRNCDANAPLMIYVSKMVPTSDRGRFYAFGRVFSGTVRSGLKVRIQGPNYVPGKKDDLFIKAIQRTVLMMGSRIEPIE 446          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_RAT (Elongation factor 2 OS=Rattus norvegicus GN=Eef2 PE=1 SV=4)

HSP 1 Score: 201.445 bits (511), Expect = 1.162e-51
Identity = 93/140 (66.43%), Postives = 114/140 (81.43%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            + SE+KD  GK L+K VM+ WLPA  ALL+M+  HLPSP TAQKYR E LYEGP DD+ A  I++CDP GPLM+Y+SKM+P SDKGRF+AFGRVFSG VSTGLKVRIMGPNY PG+K+DLY+K +QRT++ MG+  E +E
Sbjct:  323 LDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGVVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIE 462          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_PONAB (Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 SV=3)

HSP 1 Score: 201.445 bits (511), Expect = 1.162e-51
Identity = 93/140 (66.43%), Postives = 114/140 (81.43%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            + SE+KD  GK L+K VM+ WLPA  ALL+M+  HLPSP TAQKYR E LYEGP DD+ A  I++CDP GPLM+Y+SKM+P SDKGRF+AFGRVFSG VSTGLKVRIMGPNY PG+K+DLY+K +QRT++ MG+  E +E
Sbjct:  323 LDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIE 462          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_MOUSE (Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 1.162e-51
Identity = 93/140 (66.43%), Postives = 114/140 (81.43%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            + SE+KD  GK L+K VM+ WLPA  ALL+M+  HLPSP TAQKYR E LYEGP DD+ A  I++CDP GPLM+Y+SKM+P SDKGRF+AFGRVFSG VSTGLKVRIMGPNY PG+K+DLY+K +QRT++ MG+  E +E
Sbjct:  323 LDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGVVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIE 462          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_HUMAN (Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4)

HSP 1 Score: 201.445 bits (511), Expect = 1.162e-51
Identity = 93/140 (66.43%), Postives = 114/140 (81.43%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            + SE+KD  GK L+K VM+ WLPA  ALL+M+  HLPSP TAQKYR E LYEGP DD+ A  I++CDP GPLM+Y+SKM+P SDKGRF+AFGRVFSG VSTGLKVRIMGPNY PG+K+DLY+K +QRT++ MG+  E +E
Sbjct:  323 LDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIE 462          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_CRIGR (Elongation factor 2 OS=Cricetulus griseus GN=EEF2 PE=3 SV=3)

HSP 1 Score: 201.445 bits (511), Expect = 1.162e-51
Identity = 93/140 (66.43%), Postives = 114/140 (81.43%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            + SE+KD  GK L+K VM+ WLPA  ALL+M+  HLPSP TAQKYR E LYEGP DD+ A  I++CDP GPLM+Y+SKM+P SDKGRF+AFGRVFSG VSTGLKVRIMGPNY PG+K+DLY+K +QRT++ MG+  E +E
Sbjct:  323 LDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGVVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIE 462          
The following BLAST results are available for this feature:
BLAST of CF509801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
EF2_BETVU8.557e-7190.71Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_CHLKE4.707e-6177.14Elongation factor 2 OS=Chlorella kessleri PE=2 SV=... [more]
EF2_DROME1.793e-5265.25Elongation factor 2 OS=Drosophila melanogaster GN=... [more]
EF2_CAEEL3.994e-5265.71Elongation factor 2 OS=Caenorhabditis elegans GN=e... [more]
EF2_SCHPO8.897e-5265.25Elongation factor 2 OS=Schizosaccharomyces pombe G... [more]
EF2_RAT1.162e-5166.43Elongation factor 2 OS=Rattus norvegicus GN=Eef2 P... [more]
EF2_PONAB1.162e-5166.43Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 S... [more]
EF2_MOUSE1.162e-5166.43Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 S... [more]
EF2_HUMAN1.162e-5166.43Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 S... [more]
EF2_CRIGR1.162e-5166.43Elongation factor 2 OS=Cricetulus griseus GN=EEF2 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-309 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509801 ID=CF509801; Name=CF509801; organism=Citrus sinensis; type=EST; length=426bp
CACGATGAAGTCAGAAGAGAAGGATTTGATGGGCAAGGCATTGATGAAGC
GTGTCATGCAGACCTGGCTTCCTGCAAGTAGTGCACTTTTGGAAATGATG
ATCTTTCACCTTCCCTCTCCTTCCACGGCCCAAAAATATCGTGTTGAGAA
CTTGTATGAGGGTCCTCTTGATGATCAATATGCTAATGCTATTCGGAACT
GTGATCCTAATGGTCCTCTTATGCTCTATGTATCTAAGATGATTCCTGCA
TCTGATAAGGGTAGGTTCTTTGCTTTCGGTCGTGTGTTTTCTGGTAAGGT
GTCAACAGGTTTGAAGGTCAGGATCATGGGTCCAAACTATGTTCCTGGTG
AGAAGAAAGATTTGTATGTTAAGAGCGTCCAAAGGACTGTTATTTGGATG
GGAAAGAAGCAGGAAACCGTTGAGGA
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