CF509837
Overview
Analyses
This EST is derived from or has results from the following analyses
Libraries
Homology
BLAST of CF509837 vs. ExPASy Swiss-Prot
Match: BTAF1_HUMAN (TATA-binding protein-associated factor 172 OS=Homo sapiens GN=BTAF1 PE=1 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 9.116e-62 Identity = 109/169 (64.50%), Postives = 139/169 (82.25%), Query Frame = 1 Query: 1 LQYVGSAQDRIALREQFDKHNVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGRPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLS 507 L Y G +RI L+ Q +HN+I+ SYDVVR D D+ + +NYCILDEGH+IKN K+K++ AVKQL A +R+ILSGTPIQNN+ +LWSLFDFLMPGFLGTERQF A YG+P++A+RD++ S+++ EAGVLAM+ALH+QV+PFLLRR K++VL DLP KIIQD YC LS Sbjct: 1357 LHYTGPPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLS 1525
BLAST of CF509837 vs. ExPASy Swiss-Prot
Match: MOT1_SCHPO (Probable helicase mot1 OS=Schizosaccharomyces pombe GN=mot1 PE=1 SV=4) HSP 1 Score: 227.639 bits (579), Expect = 2.483e-59 Identity = 102/167 (61.08%), Postives = 136/167 (81.44%), Query Frame = 1 Query: 7 YVGSAQDRIALREQFDKHNVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGRPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLS 507 YVG +R +R + K +V++TSYD+ R D D L ++ WNYC+LDEGH+IKN+++K+T AVK L++ HRLILSGTPIQNN+ +LWSLFDFLMPGFLGTE+ FQ + RP+ A+RD+K S+K+ E G LA+EA+HKQV+PF+LRR K++VL+DLP KIIQD YCD+S Sbjct: 1449 YVGPPAERAKIRSKMKKSDVVVTSYDICRNDVDELVKIDWNYCVLDEGHVIKNARAKLTKAVKSLRSYHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKTFQERFVRPIAASRDAKSSSKERERGTLALEAIHKQVLPFMLRRLKEDVLADLPPKIIQDYYCDMS 1615
BLAST of CF509837 vs. ExPASy Swiss-Prot
Match: MOT1_YEAST (TATA-binding protein-associated factor MOT1 OS=Saccharomyces cerevisiae GN=MOT1 PE=1 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 1.043e-57 Identity = 104/166 (62.65%), Postives = 132/166 (79.52%), Query Frame = 1 Query: 7 YVGSAQDRIALREQFDKHNVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGRPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDL 504 Y G R+ LR Q ++I+TSYDV R D L + +NYC+LDEGHIIKNS+SK+ AVK++ A HRLIL+GTPIQNN+ +LWSLFDFLMPGFLGTE+ FQ + +P+ A+R+SK S+K+ EAGVLA+EALHKQV+PF+LRR K++VLSDLP KIIQD YC+L Sbjct: 1363 YAGGPTVRLTLRPQLSDADIIVTSYDVARNDLAVLNKTEYNYCVLDEGHIIKNSQSKLAKAVKEITANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLALEALHKQVLPFMLRRLKEDVLSDLPPKIIQDYYCEL 1528
BLAST of CF509837 vs. ExPASy Swiss-Prot
Match: RHP26_SCHPO (DNA repair protein rhp26 OS=Schizosaccharomyces pombe GN=rhp26 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.266e-28 Identity = 62/153 (40.52%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 49 FDKHNVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGRPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLS 507 F + +++IT+Y +R D + W YC+LDEGH I+N S+I+++ KQ++ +R+ILSGTPIQNN+T+LW+LFDF+ PG LGT FQ + P+ + S + L + P+LLRR K +V +DLP+K Q +C L+ Sbjct: 410 FTRGHILITTYAGLRIYGDLILPREWGYCVLDEGHKIRNPDSEISISCKQIRTVNRIILSGTPIQNNLTELWNLFDFVFPGRLGTLPVFQNQFALPINIGGYANASNVQVQTAYKCACMLRDLISPYLLRRMKLDVAADLPKKSEQVLFCKLT 562
BLAST of CF509837 vs. ExPASy Swiss-Prot
Match: RAD26_YEAST (DNA repair and recombination protein RAD26 OS=Saccharomyces cerevisiae GN=RAD26 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 3.866e-28 Identity = 63/149 (42.28%), Postives = 93/149 (62.42%), Query Frame = 1 Query: 61 NVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGRPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLS 507 +++IT+Y +R +D L ++ W Y +LDEGH I+N S+I++ K+LK +R+ILSGTPIQNN+T+LWSLFDF+ PG LGT FQ + P+ + + + G AL + P+LLRR K +V DLP+K +C L+ Sbjct: 442 HILITTYVGLRIHSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADVAKDLPQKKEMVLFCKLT 590
BLAST of CF509837 vs. ExPASy Swiss-Prot
Match: ERCC6_HUMAN (DNA excision repair protein ERCC-6 OS=Homo sapiens GN=ERCC6 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 9.522e-27 Identity = 62/159 (38.99%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 37 LREQFDKHNVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGRPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDEVLS--DLPEKIIQDRYCDLS 507 +R+ H ++ITSY +R D + + W+Y ILDEGH I+N + +T+A KQ + HR+ILSG+P+QNN+ +LWSLFDF+ PG LGT F + P+ S S + L + P+LLRR K +V LP+K Q +C L+ Sbjct: 611 IRDVAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLT 769
BLAST of CF509837 vs. ExPASy Swiss-Prot
Match: Y018_MYCGE (Uncharacterized ATP-dependent helicase MG018 OS=Mycoplasma genitalium GN=MG018 PE=3 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 3.618e-26 Identity = 61/165 (36.97%), Postives = 99/165 (60.00%), Query Frame = 1 Query: 13 GSAQDRIALREQFDKHNVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGRPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLS 507 G+ ++R + E K+ +++ S++V+R D ++ Q ++Y ++DE IKN S +T A K++K L L+GTPI+N + DLWS FDF++P FLG ++QF + + E + + L K+ PF+LRRTK++VL +LP+KII D Y +LS Sbjct: 660 GNFKERSQVYESL-KNQILLMSFNVLRSDIKWISQKKFHYVVIDEAQGIKNENSTVTKAAKKIKGNFCLALTGTPIENRLLDLWSCFDFVLPNFLGNKKQFSDQF---------------EKEKNDESFQKLMKKTSPFILRRTKNKVLKELPKKIITDIYVELS 808
BLAST of CF509837 vs. ExPASy Swiss-Prot
Match: INO80_CANGA (Putative DNA helicase INO80 OS=Candida glabrata GN=INO80 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.053e-25 Identity = 67/179 (37.43%), Postives = 97/179 (54.19%), Query Frame = 1 Query: 1 LQYVGSAQDRIALREQFDKHN----------VIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGRPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLS 507 L Y GSA DR LR+ +D+ N V+ITSY +V DA YL ++ W Y ILDE IK+S+S + +RL+L+GTPIQNN+ +LW+L F+MP + +F + R + + + S + + LH + PF+LRR K V S+L +KI D CDL+ Sbjct: 800 LPYWGSANDRKVLRKFWDRKNLRYSEKSPFHVMITSYQMVVADASYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFNEWFSRDIESHAEGNSSLNQQQ-----LRRLHMILKPFMLRRIKKNVQSELGDKIEIDVMCDLT 973
BLAST of CF509837 vs. ExPASy Swiss-Prot
Match: BRM_DROME (ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.053e-25 Identity = 67/172 (38.95%), Postives = 97/172 (56.40%), Query Frame = 1 Query: 1 LQYVGSAQDRIALREQF--DKHNVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKIT-VAVKQLKAAHRLILSGTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGRPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLS 507 + Y GS Q R L+ Q K NV++T+Y+ V KD L ++ W Y I+DEGH +KN K+T V A +RL+L+GTP+QN + +LW+L +FL+P + F+ + P A K + E +L + LHK + PFLLRR K EV LP+K+ CD+S Sbjct: 851 VSYKGSPQGRRLLQNQMRATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPF-ATTGEKVELNEEET-ILIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMS 1020
BLAST of CF509837 vs. ExPASy Swiss-Prot
Match: INO80_COCIM (Putative DNA helicase INO80 OS=Coccidioides immitis GN=INO80 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.796e-25 Identity = 62/179 (34.64%), Postives = 101/179 (56.42%), Query Frame = 1 Query: 1 LQYVGSAQDRIALREQFDKHN----------VIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGRPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLS 507 L Y GSA+DR LR+ +D+ N V++TSY +V DA Y ++ W Y ILDE IK+S+S ++ + +RL+L+GTPIQNN+ +LW+L F+MP + +F + + + + S + + ++ LH + PF+LRR K V +L +K+ +D +CDL+ Sbjct: 874 LPYWGSAKDRKVLRKFWDRRNITYRKQSEFHVLVTSYQLVVGDAQYFQKIKWQYMILDEAQAIKSSQSSRWKSLLGMHCRNRLLLTGTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQ-----LKRLHMILKPFMLRRIKKHVQKELGDKVEKDVFCDLT 1047 The following BLAST results are available for this feature:
BLAST of CF509837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509837 ID=CF509837; Name=CF509837; organism=Citrus sinensis; type=EST; length=507bpback to top |