CF509892

Overview
NameCF509892
Unique NameCF509892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length504
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509892 vs. ExPASy Swiss-Prot
Match: ANM5_ARATH (Protein arginine N-methyltransferase 5 OS=Arabidopsis thaliana GN=PMRT5 PE=1 SV=2)

HSP 1 Score: 265.388 bits (677), Expect = 1.079e-70
Identity = 123/164 (75.00%), Postives = 148/164 (90.24%), Query Frame = 1
Query:    1 GGWDKSESRYCGVETDFNDDMPHLLSFNLSSGGFDFVVASLMDPNYRPSLMEKDIGGGSHVLPFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDEILRTDSETTLKQEISWASHLSLQACLLPSPKGASCANYARCVNQILQSLNNMQLWLRIPLVKNDDDTTD 492
            GGW+++ESRYCGVETDF++D+ HLL+FN+S+GGFD+V+A L+DP+YRPSL+E + G  + VLP  GSDLVLSPSQWSSHVVGKISSWIDLDSEDE+LR DSETTLKQEI+WA+HLSLQACLLP+PKG SCANYARCVNQILQ L  +QLWLR+PLVK++ D+ D
Sbjct:    7 GGWERTESRYCGVETDFSNDVTHLLNFNISTGGFDYVLAPLVDPSYRPSLVEGN-GVDTQVLPVCGSDLVLSPSQWSSHVVGKISSWIDLDSEDEVLRMDSETTLKQEIAWATHLSLQACLLPTPKGKSCANYARCVNQILQGLTTLQLWLRVPLVKSEGDSMD 169          
BLAST of CF509892 vs. ExPASy Swiss-Prot
Match: ANM5_ORYSJ (Protein arginine N-methyltransferase 5 OS=Oryza sativa subsp. japonica GN=PRMT5 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.913e-51
Identity = 105/159 (66.04%), Postives = 124/159 (77.99%), Query Frame = 1
Query:   10 DKSESRYCGVET-DF--NDDMPHLLSFNLSSGGFDFVVASLMDPNYRPSLMEKDIGGGSHVLPFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDEILRTDSETTLKQEISWASHLSLQACLLPSPKGASCANYARCVNQILQSLNNMQLWLRIPLVKND 477
            DKSESRYCGVE  DF   +++P +LS +LSS  FDF++A L+DP+YRP+           VLP A SDLVL P+QWSSH+VGKIS WIDLD+EDE LR DSE TLKQEI+WASHLSLQAC+LP PK +SCANYAR VN ILQ L N+QLWLRIPL K++
Sbjct:    9 DKSESRYCGVEVLDFPAGEELPAVLSHSLSSS-FDFLLAPLVDPDYRPT--------PGSVLPVAASDLVLGPAQWSSHIVGKISEWIDLDAEDEQLRLDSEITLKQEIAWASHLSLQACVLPPPKRSSCANYARVVNHILQGLTNLQLWLRIPLEKSE 158          
BLAST of CF509892 vs. ExPASy Swiss-Prot
Match: ANM5_ORYSI (Protein arginine N-methyltransferase 5 OS=Oryza sativa subsp. indica GN=PRMT5 PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 4.262e-51
Identity = 104/159 (65.41%), Postives = 124/159 (77.99%), Query Frame = 1
Query:   10 DKSESRYCGVET-DF--NDDMPHLLSFNLSSGGFDFVVASLMDPNYRPSLMEKDIGGGSHVLPFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDEILRTDSETTLKQEISWASHLSLQACLLPSPKGASCANYARCVNQILQSLNNMQLWLRIPLVKND 477
            DKSESRYCGVE  DF   +++P +LS +LSS  FDF++A L+DP+YRP+           VLP A SDLVL P+QWSSH+VGKI+ WIDLD+EDE LR DSE TLKQEI+WASHLSLQAC+LP PK +SCANYAR VN ILQ L N+QLWLRIPL K++
Sbjct:    9 DKSESRYCGVEVLDFPAGEELPAVLSHSLSSS-FDFLLAPLVDPDYRPT--------PGSVLPVAASDLVLGPAQWSSHIVGKINEWIDLDAEDEQLRLDSEITLKQEIAWASHLSLQACVLPPPKRSSCANYARVVNHILQGLTNLQLWLRIPLEKSE 158          
BLAST of CF509892 vs. ExPASy Swiss-Prot
Match: ANM5_DICDI (Protein arginine N-methyltransferase 5 OS=Dictyostelium discoideum GN=prmt5 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.760e-23
Identity = 65/149 (43.62%), Postives = 93/149 (62.42%), Query Frame = 1
Query:   31 CGVETDFNDDMPHL-LSFNLSSGGFDFVVASLMDPNYRPSLMEKDIGGG-SHVLPFAGSDLVLSPSQWSSHVVGKISS-WIDLDSEDEILRTDSETTLKQEISWASHLSLQACLLPSPKGASCANYARCVNQILQSLNNMQLWLRIPLV 468
            CGVE +  D    +  +++L    + F++ S+  P +     +  IG   S+ + F  SD +L  + W S +VGK S+  IDLDS D  +R++S  TLKQEISWA+HLSL + LLP+P   S  NYA+ VNQ LQSL+ M++W+RIPLV
Sbjct:   11 CGVELESVDIQLDIERAYDLE---YQFIMTSISHPRFNRDFTKASIGNSFSNKVAFTRSDTLLQSNYWRSSIVGKTSTNGIDLDSIDPTIRSNSVKTLKQEISWAAHLSLPSILLPTPSFNS-TNYAQVVNQSLQSLSYMKVWIRIPLV 155          
BLAST of CF509892 vs. ExPASy Swiss-Prot
Match: ANM5_PONAB (Protein arginine N-methyltransferase 5 OS=Pongo abelii GN=PRMT5 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 1.583e-13
Identity = 46/135 (34.07%), Postives = 75/135 (55.56%), Query Frame = 1
Query:   97 GFDFVVASLMDPNYRPSLMEKDIGGGSHVLPFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDEILRTDSETTLKQEISWASHLSLQACLLPSPKGASCANYARCV-NQILQSLNNMQLWLRIPLVKNDDDTTDFI 498
            GFDF+   +  P ++   +++     +   P   SDL+LS   W++ +VGK+S WI  DSE E +R +SE  + QE+++ ++L L A LLP  +  +  N AR + N I    ++   W+R+PLV  +D   D I
Sbjct:   37 GFDFLCMPVFHPRFKREFIQEP--AKNRPGPQTRSDLLLSGRDWNTLIVGKLSPWIRPDSEVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDN-TNLARVLTNHIHTGHHSSMFWMRVPLVAPEDLRDDII 168          
BLAST of CF509892 vs. ExPASy Swiss-Prot
Match: ANM5_BOVIN (Protein arginine N-methyltransferase 5 OS=Bos taurus GN=PRMT5 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.527e-13
Identity = 46/135 (34.07%), Postives = 74/135 (54.81%), Query Frame = 1
Query:   97 GFDFVVASLMDPNYRPSLMEKDIGGGSHVLPFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDEILRTDSETTLKQEISWASHLSLQACLLPSPKGASCANYARCV-NQILQSLNNMQLWLRIPLVKNDDDTTDFI 498
            GFDF+   +  P ++    ++     S   P   SDL+LS   W++ +VGK+S WI  DS+ E +R +SE  + QE+++ ++L L A LLP  +  +  N AR + N I    ++   W+R+PLV  +D   D I
Sbjct:   37 GFDFLCMPVFHPRFKREFTQEP--AKSRPGPQTRSDLLLSGRDWNTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDN-TNLARVLTNHIHTGHHSSMFWMRVPLVAPEDLRDDII 168          
BLAST of CF509892 vs. ExPASy Swiss-Prot
Match: ANM5_MOUSE (Protein arginine N-methyltransferase 5 OS=Mus musculus GN=Prmt5 PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 4.607e-13
Identity = 45/135 (33.33%), Postives = 75/135 (55.56%), Query Frame = 1
Query:   97 GFDFVVASLMDPNYRPSLMEKDIGGGSHVLPFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDEILRTDSETTLKQEISWASHLSLQACLLPSPKGASCANYARCV-NQILQSLNNMQLWLRIPLVKNDDDTTDFI 498
            GFDF+   +  P ++   +++     +   P   SDL+LS   W++ +VGK+S WI  DS+ E +R +SE  + QE+++ ++L L A LLP  +  +  N AR + N I    ++   W+R+PLV  +D   D I
Sbjct:   37 GFDFLCMPVFHPRFKREFIQEP--AKNRPGPQTRSDLLLSGRDWNTLIVGKLSPWIHPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDN-TNLARVLTNHIHTGHHSSMFWMRVPLVAPEDLRDDVI 168          
BLAST of CF509892 vs. ExPASy Swiss-Prot
Match: ANM5_HUMAN (Protein arginine N-methyltransferase 5 OS=Homo sapiens GN=PRMT5 PE=1 SV=4)

HSP 1 Score: 73.9442 bits (180), Expect = 4.607e-13
Identity = 45/135 (33.33%), Postives = 75/135 (55.56%), Query Frame = 1
Query:   97 GFDFVVASLMDPNYRPSLMEKDIGGGSHVLPFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDEILRTDSETTLKQEISWASHLSLQACLLPSPKGASCANYARCV-NQILQSLNNMQLWLRIPLVKNDDDTTDFI 498
            GFDF+   +  P ++   +++     +   P   SDL+LS   W++ +VGK+S WI  DS+ E +R +SE  + QE+++ ++L L A LLP  +  +  N AR + N I    ++   W+R+PLV  +D   D I
Sbjct:   37 GFDFLCMPVFHPRFKREFIQEP--AKNRPGPQTRSDLLLSGRDWNTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDN-TNLARVLTNHIHTGHHSSMFWMRVPLVAPEDLRDDII 168          
BLAST of CF509892 vs. ExPASy Swiss-Prot
Match: ANM5_MACFA (Protein arginine N-methyltransferase 5 OS=Macaca fascicularis GN=PRMT5 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 7.858e-13
Identity = 45/135 (33.33%), Postives = 75/135 (55.56%), Query Frame = 1
Query:   97 GFDFVVASLMDPNYRPSLMEKDIGGGSHVLPFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDEILRTDSETTLKQEISWASHLSLQACLLPSPKGASCANYARCV-NQILQSLNNMQLWLRIPLVKNDDDTTDFI 498
            GFDF+   +  P ++   +++     +   P   SDL+LS   W++ +VGK+S WI  DS+ E +R +SE  + QE+++ ++L L A LLP  +  +  N AR + N I    ++   W+R+PLV  +D   D I
Sbjct:   37 GFDFLCMPVFHPRFKRESIQEP--AKNRPGPQTRSDLLLSGRDWNTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDN-TNLARVLTNHIHTGHHSSMFWMRVPLVAPEDLRDDII 168          
The following BLAST results are available for this feature:
BLAST of CF509892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
ANM5_ARATH1.079e-7075.00Protein arginine N-methyltransferase 5 OS=Arabidop... [more]
ANM5_ORYSJ1.913e-5166.04Protein arginine N-methyltransferase 5 OS=Oryza sa... [more]
ANM5_ORYSI4.262e-5165.41Protein arginine N-methyltransferase 5 OS=Oryza sa... [more]
ANM5_DICDI3.760e-2343.62Protein arginine N-methyltransferase 5 OS=Dictyost... [more]
ANM5_PONAB1.583e-1334.07Protein arginine N-methyltransferase 5 OS=Pongo ab... [more]
ANM5_BOVIN3.527e-1334.07Protein arginine N-methyltransferase 5 OS=Bos taur... [more]
ANM5_MOUSE4.607e-1333.33Protein arginine N-methyltransferase 5 OS=Mus musc... [more]
ANM5_HUMAN4.607e-1333.33Protein arginine N-methyltransferase 5 OS=Homo sap... [more]
ANM5_MACFA7.858e-1333.33Protein arginine N-methyltransferase 5 OS=Macaca f... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-400 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-82_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509892 ID=CF509892; Name=CF509892; organism=Citrus sinensis; type=EST; length=504bp
GGAGGATGGGATAAGAGCGAATCCAGATACTGTGGAGTTGAGACCGACTT
CAACGATGACATGCCTCACCTTTTATCCTTCAATCTTTCCTCTGGAGGCT
TTGATTTTGTCGTTGCTTCCTTGATGGATCCCAATTATCGGCCAAGCTTG
ATGGAAAAAGACATTGGTGGTGGATCACATGTTCTGCCCTTTGCTGGCTC
TGACTTAGTCTTGAGCCCTTCCCAATGGAGTAGTCACGTCGTGGGAAAAA
TTAGTTCGTGGATTGACTTGGATTCAGAAGACGAGATCCTGCGGACGGAT
TCTGAAACTACTTTGAAGCAAGAAATTTCATGGGCTTCCCATCTTTCACT
GCAGGCTTGCCTTCTTCCTTCTCCTAAGGGAGCATCATGTGCTAATTATG
CTAGGTGCGTGAATCAGATTCTTCAGAGCCTAAACAACATGCAGTTGTGG
CTTAGGATTCCATTGGTGAAGAATGATGATGATACTACGGACTTTATTCC
TTCG
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