CF510010

Overview
NameCF510010
Unique NameCF510010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510010 vs. ExPASy Swiss-Prot
Match: AROF_TOBAC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.877e-41
Identity = 96/176 (54.55%), Postives = 113/176 (64.20%), Query Frame = 2
Query:   47 MALVGST---SITPTKSSFVQPQS---QPF--------ITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKT-----SNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQM 517
            MAL  S+   S+ P KS  VQ QS    P          TKP   + PISA+H++DS+K P      +  P P   T     + V   +WTV+SWKSKKALQLPEYPN+EEL+SVLKT+++FPPIVFAG             MG+AFLLQGGDCAESFKEFNANNIRDTFRILLQM
Sbjct:    1 MALSSSSTTNSLLPNKSQLVQNQSLLPSPLKNVSFTTNSTKPVRFVQPISAIHSSDSSKNPIVSDKPSSKPSPPAATVTAAATTVTKTEWTVESWKSKKALQLPEYPNQEELQSVLKTIEEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQM 176          
BLAST of CF510010 vs. ExPASy Swiss-Prot
Match: AROF_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 7.885e-40
Identity = 93/160 (58.13%), Postives = 105/160 (65.62%), Query Frame = 2
Query:   74 TPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAK------------PPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQM 517
            +P K++F    S    TK    + PISAVH++DS K            PP+A  TT  AP  V KT      +W VDSWKSKKALQLPEYPN+EEL SVLKT+D+FPPIVFAG             MG+AFLLQGGDCAESFKEFNANNIRDTFRILLQM
Sbjct:   27 SPLKNAFFSNNS----TKTVRFVQPISAVHSSDSNKIPIVSDKPSKSSPPAATATTAPAPA-VTKT------EWAVDSWKSKKALQLPEYPNQEELRSVLKTIDEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQM 175          
BLAST of CF510010 vs. ExPASy Swiss-Prot
Match: AROG_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.030e-39
Identity = 95/182 (52.20%), Postives = 112/182 (61.54%), Query Frame = 2
Query:   47 MALVGSTSITPTKSSFVQPQSQPFITKPRSN-------------IHPISAVHAADSAK------------PPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQM 517
            MAL  +T+     S+    Q+QP ++ P  N             + PI+AVH++DS K            PP+A  TT  AP  V KT      +W VDSWKSKKALQLPEYP++EEL SVLKT+D+FPPIVFAG             MG+AFLLQGGDCAESFKEFNANNIRDTFRILLQM
Sbjct:    1 MALSTNTTTNSLLSNKSLLQNQPLLSSPSKNAFFSNKSTKTVRFVQPIAAVHSSDSNKNPIVSDKPTKSSPPAATATTAPAPA-VTKT------EWAVDSWKSKKALQLPEYPDQEELRSVLKTIDEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQM 175          
BLAST of CF510010 vs. ExPASy Swiss-Prot
Match: AROG_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 7.380e-38
Identity = 80/127 (62.99%), Postives = 92/127 (72.44%), Query Frame = 2
Query:  149 ISAVHAADSAKPPSAVKTTTKAPEPVL----KTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQM 517
            +SAVHAAD AK    V+   KA  P      +   VG  KWTVDSWK+KKALQLPEYP++EEL+SVLKT++ FPP+VFAG             MG+AF+LQGGDCAESFKEFNANNIRDTFRILLQM
Sbjct:   38 VSAVHAADPAKSNGPVQAAAKASSPSTVAAPEKKPVGLGKWTVDSWKAKKALQLPEYPSQEELDSVLKTIETFPPVVFAGEARHLEERLADAAMGRAFVLQGGDCAESFKEFNANNIRDTFRILLQM 164          
BLAST of CF510010 vs. ExPASy Swiss-Prot
Match: AROF_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.178e-35
Identity = 85/177 (48.02%), Postives = 106/177 (59.89%), Query Frame = 2
Query:   50 ALVGSTSITPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAKPP-----SAVKTTTK------------APEPVLK----TSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQM 517
            ++ G  ++ P  ++     +  F+T  R     + AVHAA+ +K P     SA KT++             AP PV      T  V P +W VDSW++KKALQLPEYPN  ELE+VLKT++ FPPIVFAG             MG+AFLLQGGDCAESFKEFN NNIRDTFR+LLQM
Sbjct:    8 SMAGGAAVVPRSATATTASA--FVTMKR-RATAVRAVHAAEPSKNPPVGVPSAAKTSSPSVAAPEKAPVAAAPAPVAPAPAATKQVAPARWAVDSWRTKKALQLPEYPNAAELEAVLKTIEAFPPIVFAGEARHLEERLADAAMGRAFLLQGGDCAESFKEFNGNNIRDTFRVLLQM 181          
BLAST of CF510010 vs. ExPASy Swiss-Prot
Match: AROG_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.010e-35
Identity = 87/166 (52.41%), Postives = 104/166 (62.65%), Query Frame = 2
Query:   47 MALVGSTSITPTKS---------SFVQPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQM 517
            MAL  + S++ +KS            QP+   F T      HPISAVHAA+ +K  +AVK                  KW++DSWK+KKALQLPEYP+++ELESVLKTL+  PP+VFAG             +GKAFLLQGGDCAESFKEFNANNIRDTFRILLQM
Sbjct:    1 MALSNTLSLSSSKSLVQSHLLHNPLPQPRFSLFPTTQHGRRHPISAVHAAEPSK--TAVKQG----------------KWSLDSWKTKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAESFKEFNANNIRDTFRILLQM 148          
BLAST of CF510010 vs. ExPASy Swiss-Prot
Match: AROF_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.428e-35
Identity = 87/166 (52.41%), Postives = 104/166 (62.65%), Query Frame = 2
Query:   47 MALVGSTSITPTKSSFV---------QPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQM 517
            MAL  + S++ +KS            QP+   F T      HPISAVHAA+ +K  +AVK                  KW++DSWK+KKALQLPEYP+++ELESVLKTL+  PP+VFAG             +GKAFLLQGGDCAESFKEFNANNIRDTFRILLQM
Sbjct:    1 MALSNTLSLSSSKSLVQSHLLHNPTPQPRFSLFPTTQHGRRHPISAVHAAEPSK--TAVKQG----------------KWSLDSWKTKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAESFKEFNANNIRDTFRILLQM 148          
BLAST of CF510010 vs. ExPASy Swiss-Prot
Match: AROF_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 5.848e-35
Identity = 77/132 (58.33%), Postives = 95/132 (71.97%), Query Frame = 2
Query:  122 TKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQM 517
            TKP+S ++ ++AVHAA+ A+   +VK +       + +S+ G  KWT +SWK KKALQLP+YPN  ELESVLKT++ FPPIVFAG             +GKAFLLQGGDCAESFKEFNA NIRDTFR+LLQM
Sbjct:   38 TKPKS-VNLVTAVHAAEPARNAVSVKES-------VASSSSGALKWTPESWKLKKALQLPDYPNANELESVLKTIEAFPPIVFAGEARNLEERLADAAVGKAFLLQGGDCAESFKEFNATNIRDTFRVLLQM 161          
BLAST of CF510010 vs. ExPASy Swiss-Prot
Match: AROG_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 3.922e-31
Identity = 74/159 (46.54%), Postives = 96/159 (60.38%), Query Frame = 2
Query:   47 MALVGSTSITPTKSSFVQPQSQPFITKPRSNIH--PISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQM 517
            M  + ++S   TKS        P+   PR  I   P+ AVH+ D  K   +   + K               W+++SWKSKKALQLP+YP++++++SVL+TL  FPPIVFAG             MG+AF+LQGGDCAESFKEFNANNIRDTFR+LLQM
Sbjct:    1 MVTLNASSPLTTKSFL------PYRHAPRRPISFSPVFAVHSTDPKKSTQSASASVK---------------WSLESWKSKKALQLPDYPDQKDVDSVLQTLSSFPPIVFAGEARKLEDKLGQAAMGQAFMLQGGDCAESFKEFNANNIRDTFRVLLQM 138          
BLAST of CF510010 vs. ExPASy Swiss-Prot
Match: AROF_CATRO (Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic OS=Catharanthus roseus GN=DHS1 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 4.806e-21
Identity = 57/115 (49.57%), Postives = 69/115 (60.00%), Query Frame = 2
Query:  125 KPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKE 469
            KPRS+    +AVH     K P +  T TK    +L         W  +SWKSKKALQLPEYP++ +L+ VLKT++ FPP+VFAG             MG AFLLQGGDCAESFKE
Sbjct:   36 KPRSSRPISAAVHVTQPPKTPISSATATKRRLSLLNGV------W--ESWKSKKALQLPEYPDEGKLDGVLKTIEAFPPLVFAGEARSLEEKLAQAAMGNAFLLQGGDCAESFKE 142          
The following BLAST results are available for this feature:
BLAST of CF510010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
AROF_TOBAC1.877e-4154.55Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_SOLTU7.885e-4058.13Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLLC1.030e-3952.20Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_ORYSJ7.380e-3862.99Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_ORYSJ1.178e-3548.02Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLTU2.010e-3552.41Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLLC3.428e-3552.41Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_ARATH5.848e-3558.33Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_ARATH3.922e-3146.54Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_CATRO4.806e-2149.57Probable phospho-2-dehydro-3-deoxyheptonate aldola... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-525 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510010 ID=CF510010; Name=CF510010; organism=Citrus sinensis; type=EST; length=518bp
AGAAATTCGTTTCATTTACATTTCAACAAAAATAAATTAGAACATTATGG
CTCTCGTTGGCAGTACTTCAATTACTCCCACAAAATCATCCTTCGTTCAG
CCACAATCTCAGCCGTTCATCACCAAACCCAGATCAAATATCCATCCCAT
CTCCGCCGTCCATGCTGCTGACTCTGCCAAGCCACCGTCTGCCGTAAAAA
CCACAACAAAGGCACCCGAGCCAGTCCTCAAGACCAGCAATGTGGGTCCC
CAAAAATGGACGGTTGACAGCTGGAAATCCAAGAAGGCTTTGCAGCTGCC
GGAGTATCCAAACAAAGAGGAGCTCGAGTCCGTGCTGAAAACGCTCGACG
ATTTCCCGCCGATTGTGTTCGCCGGTGAAGCCAGGAGCTTGGAGGAGCGG
CTAGCTGAAGCCGCCATGGGCAAAGCTTTCTTGCTTCAAGGCGGTGATTG
CGCTGAGAGTTTCAAAGAGTTTAATGCTAATAACATTCGTGACACTTTCA
GAATCCTTCTCCAGATGG
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