CF510014

Overview
NameCF510014
Unique NameCF510014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length446
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 9.676e-50
Identity = 92/114 (80.70%), Postives = 103/114 (90.35%), Query Frame = 3 
Query:  105 YDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ 446
            YDPSPLQD CVAI+DPK+GVFVNGKFCKDPK AKAEDFF SGL++ G T N++  +VT  NV+QIPGLNTLGIS VRIDYAPYGQNPPHTHPRATEILV++EGTLYVGFV+SNQ
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQ 135
[Close]
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 9.676e-50
Identity = 92/114 (80.70%), Postives = 103/114 (90.35%), Query Frame = 3 
Query:  105 YDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ 446
            YDPSPLQD CVAI+DPK+GVFVNGKFCKDPK AKAEDFF SGL++ G T N++  +VT  NV+QIPGLNTLGIS VRIDYAPYGQNPPHTHPRATEILV++EGTLYVGFV+SNQ
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQ 135
[Close]
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 9.676e-50
Identity = 92/114 (80.70%), Postives = 103/114 (90.35%), Query Frame = 3 
Query:  105 YDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ 446
            YDPSPLQD CVAI+DPK+GVFVNGKFCKDPK AKAEDFF SGL++ G T N++  +VT  NV+QIPGLNTLGIS VRIDYAPYGQNPPHTHPRATEILV++EGTLYVGFV+SNQ
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQ 135
[Close]
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 3.677e-49
Identity = 90/114 (78.95%), Postives = 103/114 (90.35%), Query Frame = 3 
Query:  105 YDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ 446
            YDPSPLQD CVAI+D K+GVFVNGKFCKDPK AKAEDFF SGL++ G+T N++  +VT  NV+QIPGLNT+GIS VRIDYAPYGQNPPHTHPRATEILV++EGTLYVGFV+SNQ
Sbjct:   23 YDPSPLQDFCVAIDDLKNGVFVNGKFCKDPKQAKAEDFFFSGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEILVLIEGTLYVGFVSSNQ 136
[Close]
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 4.065e-48
Identity = 90/113 (79.65%), Postives = 100/113 (88.50%), Query Frame = 3 
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ 446
            DPSPLQD CVAI D K+GVFVNGKFCKDPK AKAEDFF SGL++ G T N++  +VT  NV+QIPGLNTLGIS VRIDYAPYGQNPPHTHPRATEILV++EGTLYVGFV+SNQ
Sbjct:   24 DPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQ 136
[Close]
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.001e-46
Identity = 89/114 (78.07%), Postives = 99/114 (86.84%), Query Frame = 3 
Query:  105 YDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ 446
            YDPSPLQD CVA++D   GVFVNGKFCKDPK  KAEDFF SGL+  GNT NR+G +VTN NV++IPGLNTLG+S VRID+AP GQNPPHTHPRATEILVV+EGTL VGFVTSNQ
Sbjct:   25 YDPSPLQDFCVAVDDAS-GVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQ 137
[Close]
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 2.231e-46
Identity = 90/136 (66.18%), Postives = 105/136 (77.21%), Query Frame = 3 
Query:   39 MKAVQFLSGFXXXXXXXXXXXXYDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ 446
            M+  Q L  F            YDPSPLQD CVAI+D K GVFVNG+FCKDPK   A+DFF SGL+ PGNT N++G +VT  NV+QIPGLNT+GIS VRIDYAP+GQNPPHTHPR +EILV++EGTLYVGFV+SNQ
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQ 135
[Close]
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.913e-46
Identity = 90/136 (66.18%), Postives = 105/136 (77.21%), Query Frame = 3 
Query:   39 MKAVQFLSGFXXXXXXXXXXXXYDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ 446
            M+  Q L  F            YDPSPLQD CVAI+D K GVFVNG+FCKDPK   A+DFF SGL+ PGNT N++G +VT  NV+QIPGLNT+GIS VRIDYAP+GQNPPHTHPR +EILV++EGTLYVGFV+SNQ
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQ 135
[Close]
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 8.476e-46
Identity = 89/136 (65.44%), Postives = 105/136 (77.21%), Query Frame = 3 
Query:   39 MKAVQFLSGFXXXXXXXXXXXXYDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ 446
            M+  Q L  F            YDPSPLQD CVAI+D K GVFVNG+FCKDP+   A+DFF SGL+ PGNT N++G +VT  NV+QIPGLNT+GIS VRIDYAP+GQNPPHTHPR +EILV++EGTLYVGFV+SNQ
Sbjct:    1 MRVSQSLIPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQ 135
[Close]
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 1.224e-44
Identity = 84/136 (61.76%), Postives = 100/136 (73.53%), Query Frame = 3 
Query:   39 MKAVQFLSGFXXXXXXXXXXXXYDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ 446
            +K++ FL+               DPSPLQD CV +N P DGVFVNGKFCKDP++  A+DFF S L++PGNT N +G +VT  NV  + GLNTLGIS VRIDYAP GQNPPHTHPRATEILVV +GTL VGF++SNQ
Sbjct:    3 IKSLSFLAALSLFALTLPLVIASDPSPLQDFCVGVNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQ 138
The following BLAST results are available for this feature:
BLAST of CF510014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GL119_ARATH9.676e-5080.70Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL117_ARATH9.676e-5080.70Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH9.676e-5080.70Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL113_ARATH3.677e-4978.95Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL114_ARATH4.065e-4879.65Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GL17_ARATH1.001e-4678.07Germin-like protein subfamily 1 member 7 OS=Arabid... [more]
GL118_ARATH2.231e-4666.18Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL120_ARATH2.913e-4666.18Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL116_ARATH8.476e-4665.44Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL18_ARATH1.224e-4461.76Germin-like protein subfamily 1 member 8 OS=Arabid... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-529 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510014 ID=CF510014; Name=CF510014; organism=Citrus sinensis; type=EST; length=446bp
ACACTACCCAAAAAAAAAATTGATATAAATTAATCAAAATGAAAGCTGTT
CAATTTCTTTCAGGTTTTGCTCTCTTGGCTTTGGCTTCTTTATTGGCCTC
TGCCTATGACCCCAGCCCTCTTCAAGATATCTGTGTCGCCATCAATGATC
CCAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTT
GCGAAAGCAGAAGATTTCTTTTTATCAGGGCTAGACAAGCCTGGAAACAC
AGCAAATCGACTTGGCTTTAGTGTGACAAATGCAAATGTTGAGCAAATTC
CAGGACTTAACACTCTTGGCATATCAGCAGTCCGTATTGACTACGCGCCA
TACGGTCAAAATCCACCTCACACTCACCCCCGTGCCACTGAAATCCTGGT
GGTCCTGGAAGGAACTCTTTATGTTGGTTTTGTGACATCGAACCAA
back to top