CF510021

Overview
NameCF510021
Unique NameCF510021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length244
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6957 contig Csv1_Contig6957:36..279. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF510021 vs. ExPASy Swiss-Prot
Match: STT7_ARATH (Serine/threonine-protein kinase SNT7, chloroplastic OS=Arabidopsis thaliana GN=SNT7 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.385e-11
Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 3 
Query:   96 IKPFS--------KNNISSSLTTKAELIDTVRDVFLGVGVGLPCTVMECGDIIYRST 242
            +KPFS        K  +  + + +A+LIDTV ++F+GVGVGLPCTVMECGD+IYRST
Sbjct:   22 LKPFSLTSPILSFKPTVKLNSSCRAQLIDTVHNLFIGVGVGLPCTVMECGDMIYRST 78
The following BLAST results are available for this feature:
BLAST of CF510021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
STT7_ARATH4.385e-1156.14Serine/threonine-protein kinase SNT7, chloroplasti... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-536 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510021 ID=CF510021; Name=CF510021; organism=Citrus sinensis; type=EST; length=244bp
ATCAGGAAGTGCTACTCTAGTACTAATCAATCGCCGAAGTACTCCAAAAT
CAAAGCCCCCGTCATCTCCATTTCTTGGAAAAAGGCTAGTACCTAATCAA
ACCCTTTTCAAAAAACAATATTAGCTCAAGTTTGACGACAAAAGCTGAGC
TGATTGATACAGTTCGCGATGTGTTTCTGGGTGTGGGAGTGGGTTTGCCA
TGCACAGTCATGGAGTGTGGTGATATCATATACAGAAGCACTTT
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