CF510025

Overview
NameCF510025
Unique NameCF510025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13737 contig Csv1_Contig13737:65..676. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 5.527e-67
Identity = 89/130 (68.46%), Postives = 104/130 (80.00%), Query Frame = 2 
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            YDPS LQD CVAI+DPK+GVFVNGKFCKDPK A AEDFF SGLN+ G T N++  N T  NV+QIPGLNTLG+S  RIDYAP GQ+PPH HPRA+EIL+++EGTLY GFV+S+  NN L  KVL+ G  F
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVF 151

HSP 2 Score: 88.1965 bits (217), Expect = 5.527e-67
Identity = 42/58 (72.41%), Postives = 49/58 (84.48%), Query Frame = 3 
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            GDVFVFPIG+IHF VNIGKT AVA++GL+SQ  G ITIADT+FG+ P I PD LA+AF
Sbjct:  148 GDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAF 205
[Close]
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 5.527e-67
Identity = 89/130 (68.46%), Postives = 104/130 (80.00%), Query Frame = 2 
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            YDPS LQD CVAI+DPK+GVFVNGKFCKDPK A AEDFF SGLN+ G T N++  N T  NV+QIPGLNTLG+S  RIDYAP GQ+PPH HPRA+EIL+++EGTLY GFV+S+  NN L  KVL+ G  F
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVF 151

HSP 2 Score: 88.1965 bits (217), Expect = 5.527e-67
Identity = 42/58 (72.41%), Postives = 49/58 (84.48%), Query Frame = 3 
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            GDVFVFPIG+IHF VNIGKT AVA++GL+SQ  G ITIADT+FG+ P I PD LA+AF
Sbjct:  148 GDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAF 205
[Close]
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.598e-66
Identity = 87/130 (66.92%), Postives = 104/130 (80.00%), Query Frame = 2 
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            YDPS LQD CVAI+D K+GVFVNGKFCKDPK A AEDFF SGLN+ G+T N++  N T  NV+QIPGLNT+G+S  RIDYAP GQ+PPH HPRA+EIL+++EGTLY GFV+S+  NN L  KVL+ G  F
Sbjct:   23 YDPSPLQDFCVAIDDLKNGVFVNGKFCKDPKQAKAEDFFFSGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEILVLIEGTLYVGFVSSNQDNNRLFAKVLYPGDVF 152

HSP 2 Score: 88.1965 bits (217), Expect = 1.598e-66
Identity = 42/58 (72.41%), Postives = 49/58 (84.48%), Query Frame = 3 
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            GDVFVFPIG+IHF VNIGKT AVA++GL+SQ  G ITIADT+FG+ P I PD LA+AF
Sbjct:  149 GDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAF 206
[Close]
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 2.718e-66
Identity = 89/130 (68.46%), Postives = 104/130 (80.00%), Query Frame = 2 
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            YDPS LQD CVAI+DPK+GVFVNGKFCKDPK A AEDFF SGLN+ G T N++  N T  NV+QIPGLNTLG+S  RIDYAP GQ+PPH HPRA+EIL+++EGTLY GFV+S+  NN L  KVL+ G  F
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVF 151

HSP 2 Score: 85.8853 bits (211), Expect = 2.718e-66
Identity = 41/58 (70.69%), Postives = 48/58 (82.76%), Query Frame = 3 
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            GDVFVFPIG+IHF VNIGKT AVA++GL+SQ  G ITIAD +FG+ P I PD LA+AF
Sbjct:  148 GDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADIVFGSTPPINPDILAQAF 205
[Close]
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.962e-65
Identity = 88/130 (67.69%), Postives = 101/130 (77.69%), Query Frame = 2 
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            YDPS LQD CVA++D   GVFVNGKFCKDPK   AEDFF SGLN  GNT NR+G N T  NV++IPGLNTLGVS  RID+AP GQ+PPH HPRA+EIL+V+EGTL  GFVTS+  NN L +KVL+ G  F
Sbjct:   25 YDPSPLQDFCVAVDDAS-GVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQDNNRLFSKVLYPGDVF 153

HSP 2 Score: 88.9669 bits (219), Expect = 2.962e-65
Identity = 40/58 (68.97%), Postives = 49/58 (84.48%), Query Frame = 3 
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            GDVFVFPIG+IHF VN+G+T+AVA++GL SQ PG ITIAD +FG+ P I P+ LAKAF
Sbjct:  150 GDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTITIADAVFGSKPSIMPEILAKAF 207
[Close]
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 5.039e-65
Identity = 88/130 (67.69%), Postives = 103/130 (79.23%), Query Frame = 2 
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            YDPS LQD CVAI+D K GVFVNG+FCKDPK   A+DFF SGLN PGNT N++G N T  NV+QIPGLNT+G+S  RIDYAP+GQ+PPH HPR SEIL+++EGTLY GFV+S+  NN L  KVLH G  F
Sbjct:   23 YDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVF 151

HSP 2 Score: 82.8037 bits (203), Expect = 5.039e-65
Identity = 38/58 (65.52%), Postives = 49/58 (84.48%), Query Frame = 3 
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            GDVFVFPIG+IHF VN+GK  AVA++GL+SQ  G ITIA+T+FG++P I P+ LA+AF
Sbjct:  148 GDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAF 205
[Close]
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 5.039e-65
Identity = 87/129 (67.44%), Postives = 101/129 (78.29%), Query Frame = 2 
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DPS LQD CVAI D K+GVFVNGKFCKDPK A AEDFF SGLN+ G T N++  N T  NV+QIPGLNTLG+S  RIDYAP GQ+PPH HPRA+EIL+++EGTLY GFV+S+  NN L  KVL+ G  F
Sbjct:   24 DPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVF 152

HSP 2 Score: 88.1965 bits (217), Expect = 5.039e-65
Identity = 42/58 (72.41%), Postives = 49/58 (84.48%), Query Frame = 3 
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            GDVFVFPIG+IHF VNIGKT AVA++GL+SQ  G ITIADT+FG+ P I PD LA+AF
Sbjct:  149 GDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAF 206
[Close]
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 6.571e-65
Identity = 88/130 (67.69%), Postives = 103/130 (79.23%), Query Frame = 2 
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            YDPS LQD CVAI+D K GVFVNG+FCKDPK   A+DFF SGLN PGNT N++G N T  NV+QIPGLNT+G+S  RIDYAP+GQ+PPH HPR SEIL+++EGTLY GFV+S+  NN L  KVLH G  F
Sbjct:   23 YDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVF 151

HSP 2 Score: 82.8037 bits (203), Expect = 6.571e-65
Identity = 38/58 (65.52%), Postives = 49/58 (84.48%), Query Frame = 3 
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            GDVFVFPIG+IHF VN+GK  AVA++GL+SQ  G ITIA+T+FG++P I P+ LA+AF
Sbjct:  148 GDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAF 205
[Close]
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 3.230e-64
Identity = 90/148 (60.81%), Postives = 107/148 (72.30%), Query Frame = 2 
Query:    5 QFLLGFXXXXXXXXXXXXYDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            Q L+ F            YDPS LQD CVAI+D K GVFVNG+FCKDP+   A+DFF SGLN PGNT N++G N T  NV+QIPGLNT+G+S  RIDYAP+GQ+PPH HPR SEIL+++EGTLY GFV+S+  NN L  KVLH G  F
Sbjct:    5 QSLIPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVF 151

HSP 2 Score: 81.6481 bits (200), Expect = 3.230e-64
Identity = 37/58 (63.79%), Postives = 49/58 (84.48%), Query Frame = 3 
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            GDVFVFPIG+IHF +NIGK  A+A++GL+SQ  G ITIA+T+FG++P I P+ LA+AF
Sbjct:  148 GDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAF 205
[Close]
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.867e-58
Identity = 77/129 (59.69%), Postives = 89/129 (68.99%), Query Frame = 2 
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DPS LQD CV +  P DGVFVNGKFCKDPKL T EDFF +GL++      + G N T  NV  +PGLNTLG+S  RIDY   GQ+PPH HPRASE+L V  GTL+ GFVTS N  N L +K L+EG  F
Sbjct:   24 DPSSLQDFCVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGLHEARPPNPKTGSNVTAVNVNNLPGLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTS-NPENRLFSKTLYEGDVF 151

HSP 2 Score: 88.1965 bits (217), Expect = 1.867e-58
Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 3 
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K    GDVFVFP GLIHF VN+GK  AVA++GL+SQ PG ITIADT+FG++P+I P FLA AF
Sbjct:  143 KTLYEGDVFVFPQGLIHFQVNVGKYPAVAFAGLSSQNPGVITIADTVFGSNPQIDPSFLASAF 205
The following BLAST results are available for this feature:
BLAST of CF510025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL117_ARATH5.527e-6768.46Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH5.527e-6768.46Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL113_ARATH1.598e-6666.92Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL119_ARATH2.718e-6668.46Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL17_ARATH2.962e-6567.69Germin-like protein subfamily 1 member 7 OS=Arabid... [more]
GL118_ARATH5.039e-6567.69Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL114_ARATH5.039e-6567.44Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GL120_ARATH6.571e-6567.69Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL116_ARATH3.230e-6460.81Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL19_ARATH1.867e-5859.69Putative germin-like protein subfamily 1 member 9 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-540 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510025 ID=CF510025; Name=CF510025; organism=Citrus sinensis; type=EST; length=613bp
AATTCAATTTCTTCTAGGTTTTGCTCTCTTGGCTTTGGCTTCTTCTTTGG
CCTCTGCCTATGACCCTAGCCGTCTTCAAGATATCTGTGTAGCCATCGAG
GACCCGAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAA
GCTTGCGACAGCTGAAGATTTCTTCTTGTCAGGGCTAAACAAGCCTGGAA
ACACAACAAATCGACTTGGTGTTAATGAAACAGAAGCAAATGTTGAGCAA
ATTCCAGGACTCAACACCCTTGGCGTATCAGCATTCCGTATTGACTATGC
GCCGAATGGGCAAAGCCCGCCTCACATTCACCCCCGTGCCAGTGAAATCC
TGCTGGTCCTGGAAGGAACTCTTTATGCTGGTTTTGTGACATCAGACAAC
CTAAATAACACACTCATCACAAAAGTTCTGCATGAGGGGAGATGTTTTTG
TGTTTCCAATTGGTTTGATTCACTTCCACGTCAACATTGGAAAAACAAGT
GCAGTTGCCTATTCTGGTCTAAACAGCCAGTTCCCCGGTGAAATTACCAT
AGCCGACACGATCTTTGGAGCCCATCCTCGAATCAAACCCGATTTTCTTG
CCAAGGCATTCCA
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