CF510152
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF510152 vs. ExPASy Swiss-Prot
Match: RS11_EUPES (40S ribosomal protein S11 OS=Euphorbia esula GN=RPS11 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.463e-65 Identity = 111/114 (97.37%), Postives = 114/114 (100.00%), Query Frame = 1 Query: 1 GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP 342 GNRFWKSIGLGFKTPREAI+GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP Sbjct: 32 GNRFWKSIGLGFKTPREAIDGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP 145 HSP 2 Score: 30.4166 bits (67), Expect = 1.463e-65 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 341 PAGSSGGAKKAFTAM 385 PAGSSGG KKAFTA+ Sbjct: 145 PAGSSGGVKKAFTAI 159
BLAST of CF510152 vs. ExPASy Swiss-Prot
Match: RS11_SOYBN (40S ribosomal protein S11 OS=Glycine max GN=RPS11 PE=2 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 3.536e-64 Identity = 111/114 (97.37%), Postives = 112/114 (98.25%), Query Frame = 1 Query: 1 GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP 342 GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTG VSIRGRILAGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAHISP FRVKEGDHVIIGQCRPLSKTVRFNVLKVIP Sbjct: 32 GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP 145 HSP 2 Score: 29.6462 bits (65), Expect = 3.536e-64 Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 341 PAGSSGGAKKAFTAM 385 PAGSS GAKKAFT M Sbjct: 145 PAGSSSGAKKAFTGM 159
BLAST of CF510152 vs. ExPASy Swiss-Prot
Match: RS11_MAIZE (40S ribosomal protein S11 OS=Zea mays GN=RPS11 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.022e-63 Identity = 112/114 (98.25%), Postives = 114/114 (100.00%), Query Frame = 1 Query: 1 GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP 342 GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNV+KVIP Sbjct: 32 GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVVKVIP 145 HSP 2 Score: 24.2534 bits (51), Expect = 1.022e-63 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 341 PAGSSGGAKKAFTA 382 PAGS+ KKAFTA Sbjct: 145 PAGSAAAGKKAFTA 158
BLAST of CF510152 vs. ExPASy Swiss-Prot
Match: RS113_ARATH (40S ribosomal protein S11-3 OS=Arabidopsis thaliana GN=RPS11C PE=2 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 4.589e-61 Identity = 110/127 (86.61%), Postives = 115/127 (90.55%), Query Frame = 1 Query: 1 GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPCWVFWWCKEGIHG 381 GNRFWK+IGLGFKTPREAI+G YID KCPFTGTVSIRGRILAGTCHSAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP + K+ G Sbjct: 32 GNRFWKNIGLGFKTPREAIDGAYIDSKCPFTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTG 158
BLAST of CF510152 vs. ExPASy Swiss-Prot
Match: RS111_ARATH (40S ribosomal protein S11-1 OS=Arabidopsis thaliana GN=RPS11A PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 1.022e-60 Identity = 106/114 (92.98%), Postives = 112/114 (98.25%), Query Frame = 1 Query: 1 GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP 342 GNRFWK+IGLGFKTPREAI+G Y+DKKCPFTGTVSIRGRILAGTCHSAKM RTIIVRR+YLHFVKKYQRYEKRHSNIPAH+SPCFRVKEGDH+IIGQCRPLSKTVRFNVLKVIP Sbjct: 32 GNRFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHIIIGQCRPLSKTVRFNVLKVIP 145
BLAST of CF510152 vs. ExPASy Swiss-Prot
Match: RS112_ARATH (40S ribosomal protein S11-2 OS=Arabidopsis thaliana GN=RPS11B PE=2 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 8.469e-60 Identity = 105/114 (92.11%), Postives = 111/114 (97.37%), Query Frame = 1 Query: 1 GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP 342 GNRFWK+IGLGFKTPREAIEGTYID+KCPFTGTVSIRGRIL+GTCHSAKM RTIIVRR+YLHFVKKY+RYEKRHSNIPAH+SPCFRVKEGD V IGQCRPLSKTVRFNVLKVIP Sbjct: 32 GNRFWKNIGLGFKTPREAIEGTYIDQKCPFTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKEGDRVTIGQCRPLSKTVRFNVLKVIP 145 HSP 2 Score: 24.2534 bits (51), Expect = 8.469e-60 Identity = 11/15 (73.33%), Postives = 11/15 (73.33%), Query Frame = 2 Query: 341 PAGSSGGAKKAFTAM 385 PAGSS KKAFT M Sbjct: 145 PAGSSSIGKKAFTGM 159
BLAST of CF510152 vs. ExPASy Swiss-Prot
Match: RS11_DUNTE (40S ribosomal protein S11 OS=Dunaliella tertiolecta GN=RPS11 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 2.362e-49 Identity = 87/114 (76.32%), Postives = 103/114 (90.35%), Query Frame = 1 Query: 1 GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP 342 G+RF+K++GL FKTP+EAI+G Y+DKKCPFTG VSIRGRIL G S+KM RTIIVRR+YLHF+ KY RYEKRH+NIPAH+SPCFRV++GD VIIGQCRPLSKT+RFNVL+VIP Sbjct: 31 GHRFFKNVGLNFKTPKEAIDGNYVDKKCPFTGNVSIRGRILTGVVKSSKMMRTIIVRRDYLHFIPKYARYEKRHTNIPAHVSPCFRVRDGDTVIIGQCRPLSKTIRFNVLRVIP 144
BLAST of CF510152 vs. ExPASy Swiss-Prot
Match: RS11_DICDI (40S ribosomal protein S11 OS=Dictyostelium discoideum GN=rps11 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 5.446e-46 Identity = 83/111 (74.77%), Postives = 97/111 (87.39%), Query Frame = 1 Query: 1 GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 333 G R++K+IGLG++TP++AIEGTYIDKKCPFT VSIRG IL GT S KM RT++VRRNYLH++KKY R+EKRHSNIPAH+SP F VKEGD V IGQCRPLSKTVRFNV+K Sbjct: 31 GIRYYKNIGLGYRTPKDAIEGTYIDKKCPFTSDVSIRGAILRGTVISTKMRRTLVVRRNYLHYIKKYNRFEKRHSNIPAHVSPAFNVKEGDSVTIGQCRPLSKTVRFNVIK 141
BLAST of CF510152 vs. ExPASy Swiss-Prot
Match: RS11_SCHPO (40S ribosomal protein S11 OS=Schizosaccharomyces pombe GN=rps11a PE=2 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 2.988e-44 Identity = 80/113 (70.80%), Postives = 93/113 (82.30%), Query Frame = 1 Query: 1 GNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 339 G R++K +GLGFKTP EAI G Y+DKKCPF G VSIRGRIL GT S KM+RTII+RR YLHF+ KY RYEKRH N+ AH+SP FR+ EGD V +GQCRPLSKTVRFNVL+V+ Sbjct: 28 GRRWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFRINEGDVVTVGQCRPLSKTVRFNVLRVV 140
BLAST of CF510152 vs. ExPASy Swiss-Prot
Match: RS11_XENLA (40S ribosomal protein S11 OS=Xenopus laevis GN=rps11 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 3.304e-43 Identity = 78/111 (70.27%), Postives = 96/111 (86.49%), Query Frame = 1 Query: 7 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 336 R+++S+GLGFKTPREAI+GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV Sbjct: 35 RYYRSVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQVGDTVTVGECRPLSKTVRFNVLKV 145 The following BLAST results are available for this feature:
BLAST of CF510152 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF510152 ID=CF510152; Name=CF510152; organism=Citrus sinensis; type=EST; length=393bpback to top |