CF831967

Overview
NameCF831967
Unique NameCF831967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length640
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3453 contig Csv1_Contig3453:966..1605. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF831967 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.956e-25
Identity = 54/78 (69.23%), Postives = 61/78 (78.21%), Query Frame = 3 
Query:  405 GFVGSHLVDRLIARGDSVIVVDNFFAGRKENVMHHFGNPNFELIIHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKT 638
            GFVGSHL D+L+  G  V VVDNFF GRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT
Sbjct:   99 GFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKT 176
[Close]
BLAST of CF831967 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.956e-25
Identity = 54/78 (69.23%), Postives = 61/78 (78.21%), Query Frame = 3 
Query:  405 GFVGSHLVDRLIARGDSVIVVDNFFAGRKENVMHHFGNPNFELIIHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKT 638
            GFVGSHL D+L+  G  V VVDNFF GRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT
Sbjct:   98 GFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKT 175
[Close]
BLAST of CF831967 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.956e-25
Identity = 54/78 (69.23%), Postives = 61/78 (78.21%), Query Frame = 3 
Query:  405 GFVGSHLVDRLIARGDSVIVVDNFFAGRKENVMHHFGNPNFELIIHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKT 638
            GFVGSHL D+L+  G  V VVDNFF GRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT
Sbjct:   98 GFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKT 175
[Close]
BLAST of CF831967 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.956e-25
Identity = 54/78 (69.23%), Postives = 61/78 (78.21%), Query Frame = 3 
Query:  405 GFVGSHLVDRLIARGDSVIVVDNFFAGRKENVMHHFGNPNFELIIHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKT 638
            GFVGSHL D+L+  G  V VVDNFF GRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT
Sbjct:   98 GFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKT 175
[Close]
BLAST of CF831967 vs. ExPASy Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.956e-25
Identity = 54/78 (69.23%), Postives = 61/78 (78.21%), Query Frame = 3 
Query:  405 GFVGSHLVDRLIARGDSVIVVDNFFAGRKENVMHHFGNPNFELIIHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKT 638
            GFVGSHL D+L+  G  V VVDNFF GRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT
Sbjct:   98 GFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKT 175
[Close]
BLAST of CF831967 vs. ExPASy Swiss-Prot
Match: UXS1_DANRE (UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.956e-25
Identity = 54/78 (69.23%), Postives = 61/78 (78.21%), Query Frame = 3 
Query:  405 GFVGSHLVDRLIARGDSVIVVDNFFAGRKENVMHHFGNPNFELIIHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKT 638
            GFVGSHL D+L+  G  V VVDNFF GRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT
Sbjct:   96 GFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKT 173
The following BLAST results are available for this feature:
BLAST of CF831967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
UXS1_XENTR2.956e-2569.23UDP-glucuronic acid decarboxylase 1 OS=Xenopus tro... [more]
UXS1_RAT2.956e-2569.23UDP-glucuronic acid decarboxylase 1 OS=Rattus norv... [more]
UXS1_PONAB2.956e-2569.23UDP-glucuronic acid decarboxylase 1 OS=Pongo abeli... [more]
UXS1_MOUSE2.956e-2569.23UDP-glucuronic acid decarboxylase 1 OS=Mus musculu... [more]
UXS1_HUMAN2.956e-2569.23UDP-glucuronic acid decarboxylase 1 OS=Homo sapien... [more]
UXS1_DANRE2.956e-2569.23UDP-glucuronic acid decarboxylase 1 OS=Danio rerio... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_01B15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01B15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831967 ID=CF831967; Name=CF831967; organism=Citrus sinensis; type=EST; length=640bp
CACTCACCCACTCCTTAGCTGTCACTCACCCACGAAACTTGTTGTCACGC
CGCGGTCATTGTTGACCAGCCATCATCGCTGTCACGCCACGCCCATCGCC
GACCAGCCCATCACCGATCACGTCGCCGTTGACGGTGTGCTTGACGATTT
TGGACCTTTTTCACCTACCTAGGATTCAAATGTACAAACACCATTATCTT
CTGAGGTGGATATTGGACTCCCAACGCATGAGAGCAATAAGGATCCTGTA
AGTTTTATGTTCTTTGATGTAATACTATTTAATTATTTTAATTTTTAATG
GTCACTAAATAATGGACATTATTTAAGAACCTGTGATCGCATACCAATTA
CAAGGATGTGATATTTATCCATGGTTTCCTTTTGATTCTTAGAAAAAAAA
AACGGGGTTCGTCGGGTCTCACCTCGTGGACCGTCTGATCGCGAGGGGCG
ACAGCGTGATCGTTGTAGATAATTTCTTCGCGGGAAGGAAAGAAAACGTG
ATGCACCACTTTGGTAACCCGAATTTTGAGCTCATCATACACGACGTCGT
CGAGCCTCTCTTGCTTGAAGTCGACCAGATCTACCATCTCGCTTGTCCCG
CATCTCCAGTTCATTACAAATTCAACCCCGTCAAGACTAT
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