CF831991

Overview
NameCF831991
Unique NameCF831991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1002 contig Csv1_Contig1002:1..790. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831991 vs. ExPASy Swiss-Prot
Match: RL72_ARATH (60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=1 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.561e-83
Identity = 152/175 (86.86%), Postives = 160/175 (91.43%), Query Frame = -1
Query:  267 EAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQAFGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 791
            EAKLKGGFYV+PEAKLLFIIRIRGINA+DPKTKKILQLLRLRQIFNGVFLKVNKAT+NML RVEPYVTYG+PNLKSVKELIYKRGYGKLN QRIALTDNSI+EQA G+HGIIC EDLIHEILTVGPHFKEANNFLWPF           KRNHYVEGGDAGNRE++INELIRRMN
Sbjct:   68 EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242          
BLAST of CF831991 vs. ExPASy Swiss-Prot
Match: RL73_ARATH (60S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 2.038e-83
Identity = 150/175 (85.71%), Postives = 161/175 (92.00%), Query Frame = -1
Query:  267 EAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQAFGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 791
            EAKLKGGFYV+PEAKLLFIIRIRGINA+DPKTKKILQLLRLRQIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSVKELIYKRGYGKLN QRIALTDNSI++QA G+HGIIC+EDLIHEI+TVGPHFKEANNFLWPF           KRNHYVEGGDAGNRE++INEL+RRMN
Sbjct:   68 EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242          
BLAST of CF831991 vs. ExPASy Swiss-Prot
Match: RL74_ARATH (60S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 5.021e-82
Identity = 147/175 (84.00%), Postives = 159/175 (90.86%), Query Frame = -1
Query:  267 EAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQAFGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 791
            EAKLKGGFYV+PEAKLLFIIRIRGINA+DPKTKKILQLLRLRQIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSVKELIYKRG+GKLN QR ALTDNSI++Q  G+HGIIC+EDLIHEI+TVGPHFKEANNFLWPF           KRNHYVEGGDAGNRE++INEL+RRMN
Sbjct:   70 EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244          
BLAST of CF831991 vs. ExPASy Swiss-Prot
Match: RL7_PONAB (60S ribosomal protein L7 OS=Pongo abelii GN=RPL7 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.270e-65
Identity = 120/174 (68.97%), Postives = 139/174 (79.89%), Query Frame = -1
Query:  267 AKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQAFGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 788
            A+  G FYV  E KL F+IRIRGIN V PK +K+LQLLRLRQIFNG F+K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRGYGK+NK+RIALTDN++I ++ G++GIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRED IN LIRRMN
Sbjct:   74 ARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 247          
BLAST of CF831991 vs. ExPASy Swiss-Prot
Match: RL7_MOUSE (60S ribosomal protein L7 OS=Mus musculus GN=Rpl7 PE=2 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 3.270e-65
Identity = 121/174 (69.54%), Postives = 138/174 (79.31%), Query Frame = -1
Query:  267 AKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQAFGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 788
            A+  G FYV  E KL F+IRIRGIN V PK +K+LQLLRLRQIFNG F+K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRGYGK+NK+RIALTDNS+I ++ G+ GIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRED IN LIRRMN
Sbjct:   97 ARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 270          
BLAST of CF831991 vs. ExPASy Swiss-Prot
Match: RL7_MACFA (60S ribosomal protein L7 OS=Macaca fascicularis GN=RPL7 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.270e-65
Identity = 120/174 (68.97%), Postives = 139/174 (79.89%), Query Frame = -1
Query:  267 AKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQAFGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 788
            A+  G FYV  E KL F+IRIRGIN V PK +K+LQLLRLRQIFNG F+K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRGYGK+NK+RIALTDN++I ++ G++GIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRED IN LIRRMN
Sbjct:   74 ARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEICTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 247          
BLAST of CF831991 vs. ExPASy Swiss-Prot
Match: RL7_HUMAN (60S ribosomal protein L7 OS=Homo sapiens GN=RPL7 PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.270e-65
Identity = 120/174 (68.97%), Postives = 139/174 (79.89%), Query Frame = -1
Query:  267 AKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQAFGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 788
            A+  G FYV  E KL F+IRIRGIN V PK +K+LQLLRLRQIFNG F+K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRGYGK+NK+RIALTDN++I ++ G++GIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRED IN LIRRMN
Sbjct:   75 ARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248          
BLAST of CF831991 vs. ExPASy Swiss-Prot
Match: RL7_BOVIN (60S ribosomal protein L7 OS=Bos taurus GN=RPL7 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.270e-65
Identity = 120/174 (68.97%), Postives = 139/174 (79.89%), Query Frame = -1
Query:  267 AKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQAFGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 788
            A+  G FYV  E KL F+IRIRGIN V PK +K+LQLLRLRQIFNG F+K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRGYGK+NK+RIALTDN++I ++ G++GIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRED IN LIRRMN
Sbjct:   75 ARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248          
BLAST of CF831991 vs. ExPASy Swiss-Prot
Match: RL7_RAT (60S ribosomal protein L7 OS=Rattus norvegicus GN=Rpl7 PE=1 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 5.577e-65
Identity = 120/174 (68.97%), Postives = 138/174 (79.31%), Query Frame = -1
Query:  267 AKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQAFGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 788
            A+  G FYV  E KL F+IRIRGIN V PK +K+LQLLRLRQIFNG F+K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRGYGK+NK+RIALTDNS++ ++ G+ GIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRED IN LIRRMN
Sbjct:   87 ARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASVNMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLVARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 260          
BLAST of CF831991 vs. ExPASy Swiss-Prot
Match: RL7_CHICK (60S ribosomal protein L7 OS=Gallus gallus GN=RPL7 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.383e-62
Identity = 116/174 (66.67%), Postives = 136/174 (78.16%), Query Frame = -1
Query:  267 AKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQAFGQHGIICMEDLIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 788
            A+  G +YV  E KL F+IRIRGIN V PK +K+LQLLRLRQIFNG F+K+NKA++NML  VEPY+ +GYPNLKSV +LIYKRGYGK+NK+RIALTDNS+I +  G+ GIICMED+IHEI TVG +FK  NNFLWPF           K  H+VEGGDAGNRED IN LIRRMN
Sbjct:   73 ARKAGNYYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVHDLIYKRGYGKINKKRIALTDNSLIRKRLGKLGIICMEDVIHEIYTVGKNFKVVNNFLWPFKLSSPRGGMKKKTIHFVEGGDAGNREDQINRLIRRMN 246          
The following BLAST results are available for this feature:
BLAST of CF831991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
RL72_ARATH1.561e-8386.8660S ribosomal protein L7-2 OS=Arabidopsis thaliana... [more]
RL73_ARATH2.038e-8385.7160S ribosomal protein L7-3 OS=Arabidopsis thaliana... [more]
RL74_ARATH5.021e-8284.0060S ribosomal protein L7-4 OS=Arabidopsis thaliana... [more]
RL7_PONAB3.270e-6568.9760S ribosomal protein L7 OS=Pongo abelii GN=RPL7 P... [more]
RL7_MOUSE3.270e-6569.5460S ribosomal protein L7 OS=Mus musculus GN=Rpl7 P... [more]
RL7_MACFA3.270e-6568.9760S ribosomal protein L7 OS=Macaca fascicularis GN... [more]
RL7_HUMAN3.270e-6568.9760S ribosomal protein L7 OS=Homo sapiens GN=RPL7 P... [more]
RL7_BOVIN3.270e-6568.9760S ribosomal protein L7 OS=Bos taurus GN=RPL7 PE=... [more]
RL7_RAT5.577e-6568.9760S ribosomal protein L7 OS=Rattus norvegicus GN=R... [more]
RL7_CHICK3.383e-6266.6760S ribosomal protein L7 OS=Gallus gallus GN=RPL7 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01C04_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831991 ID=CF831991; Name=CF831991; organism=Citrus sinensis; type=EST; length=791bp
TTTTTTTTTTTTTTTTTAATTAAAAACAGATCCGCCACTTCCTTAAATGA
AACTAAAACACGTGAAAACAAAAAATAAAATTCCCAATGATAATCCAGAT
CTGAAGCCAAAATAACAACACTGTCACTGTTATAAAAAGTAAAAAAGTTT
CTACTTAACTTCCAGGGAAAAGGCTGGGAATAATAGGAAACACTAAAAGC
CAAAATTTAAGATATTGATCACATCAAAACTTCTTCAAAAGGGGTAGGAT
ATTCTGCAAAAGCCTAGTTCATCCTTCTGATGAGCTCATTGATGTAATCT
TCACGGTTTCCTGCATCACCGCCTTCAACATAGTGGTTCCTCTTCTTCTT
CAGGCCACCCAATGGTGCCTTGAGCTTGAAGGGCCATAGGAAGTTGTTTG
CCTCCTTGAAGTGAGGACCAACAGTCAAAATCTCATGGATGAGATCTTCC
ATGCAGATAATTCCATGCTGCCCAAAAGCCTGTTCGATGATAGAATTGTC
GGTCAAAGCAATCCTCTGCTTATTTAATTTGCCGTAACCCCTCTTGTAAA
TCAGTTCTTTGACACTCTTTAAATTGGGGTACCCATATGTTACATAGGGC
TCAACTCTGTGCAACATATTGAGTGTGGCTTTGTTCACTTTCAAAAAAAC
ACCATTAAAAATCTGTCTCAAACGGAGAAGCTGCAAAATTTTCTTGGTCT
TTGGATCAACAGCATTGATACCGCGAATCCTGATAATGAACAAAAGCTTA
GCTTCTGGGTTGACATAAAATCCACCCTTAAGCTTGGCCTC
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