CF832155

Overview
NameCF832155
Unique NameCF832155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.464e-48
Identity = 89/172 (51.74%), Postives = 110/172 (63.95%), Query Frame = -2
Query:  217 YAWGYCYIRQVSPASSDXXXXXXXXPLPG-QYYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 729
            YAWGYCY R+++P SS           PG QY+GRGP+QL+WN NY +CG A+G               +SFKSA WFWMT Q PKPSCH VII  W PS++D  AGR+PGYG+ TNIINGG+ECG   N  V +RIGF+  +C   G+  G+NLDC NQ P+G  +   SM
Sbjct:  153 YAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 324          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.217e-47
Identity = 85/164 (51.83%), Postives = 110/164 (67.07%), Query Frame = -2
Query:  241 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 729
            YAWGYC++++ +P+S+           PG+ YYGRGP+QL+WN NY  CGEAL                LSFK+A+WFWMT Q PKPSCH+V+   W+PSA D  AGRLPGYG+ TN++NGG+ECG   N  V +R+GFF  +CG  G+  G+NLDC NQRP+G
Sbjct:   80 YAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDCYNQRPFG 243          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.076e-47
Identity = 87/172 (50.58%), Postives = 110/172 (63.95%), Query Frame = -2
Query:  217 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 729
            YAWGYCY+R+     S           PGQ YYGRGPIQ+++N NY  CG A+G               +SFKSAIWFWMTAQ PKPSCH+VI   W PSA D  A RLPGYG+ TNIINGG+ECG+  +  V++RIGF+  +C   G+ PGDN+DC NQ+ +   L+ ++M
Sbjct:  163 YAWGYCYLREQGNPPSYCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSDARVQDRIGFYRRYCSILGVSPGDNIDCGNQKSFNSGLLLETM 334          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 6.041e-47
Identity = 86/171 (50.29%), Postives = 111/171 (64.91%), Query Frame = -2
Query:  217 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 729
            YAWGYC++R+ +P++              QYYGRGPIQ++WN NY +CG A+G               +SFK+A+WFWMT Q PKPSCH+VI   W PS+ D  AGRLPGYG  TNIINGG+ECG   +  V++RIGF+  +C  FGI  GDNLDC +QRP+G +L   S+
Sbjct:  146 YAWGYCFLREQNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQRPFGSSLPLSSI 316          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 7.890e-47
Identity = 88/172 (51.16%), Postives = 108/172 (62.79%), Query Frame = -2
Query:  217 YAWGYCYIRQVSPASSDXXXXXXXXPLPG-QYYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 729
            YAWGYCY R+++P SS           PG QY+GRGP+QL+WN NY +CG A+G               +SFKSA WFWMT Q PKPSCH VII  W PS++D  AGR  GYG+ TNIINGG+ECG   N  V +RIGF+  +C   G+  G+NLDC NQ P+G  +   SM
Sbjct:  131 YAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 302          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.680e-46
Identity = 86/171 (50.29%), Postives = 104/171 (60.82%), Query Frame = -2
Query:  217 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 729
            Y WGYCY R+++PA               QY+GRGP+QLTWN NY +CG A+G               +SFKSA WFWMT Q PKPSCH+VII  W PS +D  AGR+PG+GL TNIINGG+ECG   N  V +RIGF+  +C   G+  G+NLDC NQR Y       SM
Sbjct:  151 YTWGYCYNRELNPADYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDCYNQRSYNNGPSVDSM 321          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.139e-45
Identity = 83/172 (48.26%), Postives = 108/172 (62.79%), Query Frame = -2
Query:  217 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 729
            YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+G               +SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG+  +  V++RIGF+  +CG  G+ PGDNLDC NQR +G  L+  +M
Sbjct:  147 YAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTM 318          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.488e-45
Identity = 82/172 (47.67%), Postives = 108/172 (62.79%), Query Frame = -2
Query:  217 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 729
            YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+G               +SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG+  +  V++RIGF+  +CG  G+ PGDNLDC NQR +G  L+  ++
Sbjct:  145 YAWGYCFLREQGSPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 316          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.488e-45
Identity = 84/172 (48.84%), Postives = 108/172 (62.79%), Query Frame = -2
Query:  217 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 729
            YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+G               +SFKSA+WFWMT Q PKPSCH+VII  W+PSA D  A RLPG+G+ TNIINGG+ECG   +  V++RIGF+  +C   G+ PGDNLDC NQR +G  L+  +M
Sbjct:  158 YAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 329          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 182.57 bits (462), Expect = 1.943e-45
Identity = 84/163 (51.53%), Postives = 106/163 (65.03%), Query Frame = -2
Query:  244 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 729
            Y+WGYC+ ++ +PAS             G+ YYGRGP+QL+WN NY  CG A+G               ++FK+AIWFWMTAQPPKPSCH VI  +W+PS  D  AGRLPGYG+ TNIINGG+ECG   +  V +RIGF+  +C  FG+ PG NLDC NQR +
Sbjct:  164 YSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQRSF 326          
The following BLAST results are available for this feature:
BLAST of CF832155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI1_GOSHI5.464e-4851.74Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHIT_CARPA1.217e-4751.83Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI3_TOBAC2.076e-4750.58Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3... [more]
CHI2_PEA6.041e-4750.29Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=... [more]
CHI2_GOSHI7.890e-4751.16Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHI1_THECC6.680e-4650.29Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 S... [more]
CHI1_SOLTU1.139e-4548.26Endochitinase 1 (Fragment) OS=Solanum tuberosum GN... [more]
CHI2_SOLTU1.488e-4547.67Endochitinase 2 (Fragment) OS=Solanum tuberosum GN... [more]
CHI1_TOBAC1.488e-4548.84Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1... [more]
CHIB_ARATH1.943e-4551.53Basic endochitinase B OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01G11_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832155 ID=CF832155; Name=CF832155; organism=Citrus sinensis; type=EST; length=733bp
TTTTTTTTTTGCCTTAATTGTCATGTTAAAATAATCAAACGATGAAAGAT
GGACAAGACTCATTGATCCATGTTGGATCAGTCTTATTTAATTTACTTAC
AATAAGAGCGTAACAAACTAACAATTTAGTTGTCCACCTACAAGTGTGAC
ATCTAAAGTTTTTATTAAGTAGCTTTTATTAAGCTTATTTTACTAAAACG
TTGATCATGATGATCACATAGATTGTGCCATCAGATTAAGGCCATAAGGC
CGTTGGTTGGAGCAATCAAGATTGTCACCAGGCTGAATCCCAAACTTGCC
ACAGAAAGTGGTAAAGAACCCAATACGGTTACGTACAGCGTCATTCCCAA
CGTAGCCACATTCAATTCCACCGTTGATTATATTTGTGGTTAGACCGTAT
CCCGGAAGCCGGCCGGCGTTTACGTCATTTGCTGATGGTTTCCATTCGTC
GATAATGACTTCGTGGCACGATGGCTTTGGTGGCTGTGCAGTCATCCAGA
ACCAGATTGCTGACTTGAATGATAGTACTGGATCAGNGGCAAGTAGGTCT
GGATTGTTCAACAAGTCCACCCCCAAGGCTTCTCCGCACCTTAAGTAATT
GCAATTCCAAGTGAGTTGAATTGGACCTCGGCCATAGTATTGCCCTGGCA
AGGGACATGGACAGTAAGGATAACAGTAGTCGGACGACGCAGGGCTAACT
TGCCTAATATAGCAATATCCCCAAGCATATTCT
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