CF832590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: R10A3_ARATH (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana GN=RPL10AC PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.416e-30 Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGP NR+F Sbjct: 153 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: R10A1_ARATH (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana GN=RPL10AA PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.678e-29 Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGP RIF Sbjct: 152 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: R10A2_ARATH (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana GN=RPL10AB PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.862e-29 Identity = 62/65 (95.38%), Postives = 63/65 (96.92%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 ATVKFQLKKVLCMGVAVGNLSMEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGP RIF Sbjct: 152 ATVKFQLKKVLCMGVAVGNLSMEEKQLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: RL10A_CHLRE (60S ribosomal protein L10a OS=Chlamydomonas reinhardtii GN=RPL10A PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.205e-19 Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = -2 Query: 234 TVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 425 ++KFQLKKVLCMGVAV N+ M E +I N+ ++NFLVSLLKKNWQNVRCLY+KSTMG RI+ Sbjct: 150 SIKFQLKKVLCMGVAVANVGMTEGEIRTNIMYAINFLVSLLKKNWQNVRCLYIKSTMGKPIRIY 213
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: RL10A_TRYBR (60S ribosomal protein L10a OS=Trypanosoma brucei rhodesiense GN=RPL10A PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.685e-19 Identity = 43/65 (66.15%), Postives = 54/65 (83.08%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 +TVKFQLKKVLC+G VG++ M E Q+ QNV M++NFLVSLLKKNWQN++ Y+KSTMG S RI+ Sbjct: 150 STVKFQLKKVLCLGTCVGHVDMTEDQVRQNVVMAINFLVSLLKKNWQNLKSAYIKSTMGKSQRIY 214
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: RL10A_DANRE (60S ribosomal protein L10a OS=Danio rerio GN=rpl10a PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.580e-19 Identity = 40/65 (61.54%), Postives = 55/65 (84.62%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 +T+KFQ+KKVLC+ VAVG++ M E+++ N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++ Sbjct: 152 STIKFQMKKVLCLAVAVGHVKMSEEELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 216
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: R10AB_DROME (60S ribosomal protein L10a-2 OS=Drosophila melanogaster GN=RpL10Ab PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 5.982e-19 Identity = 40/65 (61.54%), Postives = 56/65 (86.15%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 +T+KFQ+KKVLC+ VAVG++ M+ ++ QNV +S+NFLVSLLKKNWQNVR L++KS+MGP R++ Sbjct: 153 STIKFQMKKVLCLSVAVGHVGMKSDELAQNVNLSINFLVSLLKKNWQNVRSLHVKSSMGPPQRLY 217
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: RL10A_XENLA (60S ribosomal protein L10a OS=Xenopus laevis GN=rpl10a PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.813e-19 Identity = 39/65 (60.00%), Postives = 55/65 (84.62%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 +T+KFQ+KKVLC+ VAVG++ + E+++ N+ +S+NFLVSLLKKNWQNVR LY+KSTMG R++ Sbjct: 153 STIKFQMKKVLCLAVAVGHVKLTEEELVYNIHLSINFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: RL10A_CANAL (60S ribosomal protein L10a OS=Candida albicans GN=RPL10A PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.333e-18 Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 +T+KFQLKKVLC+ VAVGN+ MEE + + M+ NFLVSLLKKNWQNV L +KSTMGPS RI+ Sbjct: 153 STIKFQLKKVLCLAVAVGNVDMEEDVLVNQIMMAANFLVSLLKKNWQNVGSLVIKSTMGPSFRIY 217
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: RL10A_SPOFR (60S ribosomal protein L10a OS=Spodoptera frugiperda GN=RpL10A PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.273e-18 Identity = 40/65 (61.54%), Postives = 55/65 (84.62%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 AT+KFQ+KKVLC+ VAVG++ M ++ QNV +S+NFLVSLLKK+WQNVR L++KSTMGP +++ Sbjct: 153 ATIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPPKLY 217 The following BLAST results are available for this feature:
BLAST of CF832590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832590 ID=CF832590; Name=CF832590; organism=Citrus sinensis; type=EST; length=429bpback to top |