CF832670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_PLAOC (50S ribosomal protein L22, chloroplastic OS=Platanus occidentalis GN=rpl22 PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 8.179e-47 Identity = 89/126 (70.63%), Postives = 106/126 (84.13%), Query Frame = 1 Query: 19 NRNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEYAV 396 N+ K N EV A +++ MSAHK RRVIDQIRGRSYEETLMILELMPYRACYPIFKL+YSAAAN HNMGFNEA L+I+KAEVNE + KR +P+A+GR + IKRPTCHIT+VL+D+SLD+EY + Sbjct: 3 NKIKKNPDTEVYALGQHICMSAHKARRVIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAANASHNMGFNEADLIISKAEVNEGPTMKRLKPRARGRSYPIKRPTCHITIVLKDISLDEEYLI 128
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_BUXMI (50S ribosomal protein L22, chloroplastic OS=Buxus microphylla GN=rpl22 PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.181e-45 Identity = 86/123 (69.92%), Postives = 105/123 (85.37%), Query Frame = 1 Query: 28 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEYAV 396 K N+ AEV A +++ MSAHK RRVIDQIRGRSYEE LMILELMPYRACYPIFKL+YSAAAN HNMGFNEA VI+KAEVN+ TS K+ +P+A+GR ++IKRPTCHIT+VL+D+ LD++Y + Sbjct: 3 KKNRDAEVYALGQHICMSAHKARRVIDQIRGRSYEEALMILELMPYRACYPIFKLVYSAAANASHNMGFNEADSVISKAEVNDGTSVKKLKPRARGRSYLIKRPTCHITIVLKDIYLDEKYII 125
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_CARPA (50S ribosomal protein L22, chloroplastic OS=Carica papaya GN=rpl22 PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 4.488e-45 Identity = 85/127 (66.93%), Postives = 104/127 (81.89%), Query Frame = 1 Query: 19 NRNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEYAVS 399 ++ K +V A +++ MSAHK RRVIDQIRGRSYEETLMILELMPYRACYPIFKL+YSAAAN HNMGFNE SLV++KAEVNE T+ K+ +P+A+GR + IKRPTCHIT+VL D ++ DEY +S Sbjct: 3 SKRKKKSDTKVYALGQHIRMSAHKARRVIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAANASHNMGFNETSLVVSKAEVNEGTTVKKFKPRARGRSYPIKRPTCHITIVLEDTTVYDEYVIS 129
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_MORIN (50S ribosomal protein L22, chloroplastic OS=Morus indica GN=rpl22 PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 6.481e-44 Identity = 82/123 (66.67%), Postives = 104/123 (84.55%), Query Frame = 1 Query: 22 RNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 + +TN+ EV A A+Y+ MSAHK RRVIDQIRGRSY ETL+ILELMPYRACYPI KL+YSAAAN HNM FNEA+L+I+KAEVNE + K+ +P+A+GR + IKRPTCHIT+VL+D+ +++EY Sbjct: 4 KRRTNRYTEVYAIAQYISMSAHKARRVIDQIRGRSYAETLIILELMPYRACYPILKLVYSAAANANHNMRFNEANLIISKAEVNEGNTVKKLKPRARGRGYPIKRPTCHITIVLKDLDVEEEY 126
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_EUCGG (50S ribosomal protein L22, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rpl22 PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 6.481e-44 Identity = 88/124 (70.97%), Postives = 102/124 (82.26%), Query Frame = 1 Query: 22 RNKTNKK--AEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDE 387 R K NK EV A +++ MSAHK RRVIDQIRGRSYEETLMILELMPYRACYPIFKL+YSAAAN HNMGFNEASLVI+KAEVNE T+ K+ +P+A+GR + IKRPTCHI +VL+D S +E Sbjct: 2 RKKRNKNLYGEVYALGQHISMSAHKARRVIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAANASHNMGFNEASLVISKAEVNEGTTMKKLKPRARGRSYAIKRPTCHIRIVLKDKSFYEE 125
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_PELHO (50S ribosomal protein L22, chloroplastic OS=Pelargonium hortorum GN=rpl22-A PE=3 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 2.463e-43 Identity = 86/123 (69.92%), Postives = 104/123 (84.55%), Query Frame = 1 Query: 28 KTNKK--AEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 K NKK EVSA +Y+ MS HK RRVIDQIRGRSYEETLMILELMPYRACYPI KLI SAAANG+HNM F+E SL+I+KAEVNE +AK+ +P+A+G+ + IKR TCHIT+VLRD+SL+++Y Sbjct: 4 KKNKKRYTEVSALGKYIPMSTHKARRVIDQIRGRSYEETLMILELMPYRACYPILKLISSAAANGIHNMNFDETSLIISKAEVNEGPTAKKFKPRAKGQSYPIKRSTCHITIVLRDISLNEKY 126
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_POPAL (50S ribosomal protein L22, chloroplastic OS=Populus alba GN=rpl22 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 4.201e-43 Identity = 82/113 (72.57%), Postives = 98/113 (86.73%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 384 E SAS Y+ MSAHK RR+IDQIRGRSYEETLMILELMPYRACYPIFKL+YSAAAN HNMG NEASLVI+KAEVNE + K+ +P+A+GR ++IKRPTCHI++VL D+S ++ Sbjct: 11 EASASGFYISMSAHKARRIIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAANASHNMGLNEASLVISKAEVNEGATMKKFKPRARGRSYLIKRPTCHISIVLEDISYEE 123
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_COFAR (50S ribosomal protein L22, chloroplastic OS=Coffea arabica GN=rpl22 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.222e-42 Identity = 82/118 (69.49%), Postives = 102/118 (86.44%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 KK EV A +++ MSA K RRVIDQIRGRSYEETL+ILELMPYRACYPIFKL+YSAAAN +NM N+A+L+I+KAEVNE T+ K+ +P+A+GR + IKRPTCHIT+V++D+SLDDEY Sbjct: 5 KKTEVYALGQHISMSADKARRVIDQIRGRSYEETLIILELMPYRACYPIFKLVYSAAANASYNMSSNDANLLISKAEVNEGTTIKKFKPRARGRSYPIKRPTCHITIVMKDISLDDEY 122
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_RANMC (50S ribosomal protein L22, chloroplastic OS=Ranunculus macranthus GN=rpl22 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.085e-42 Identity = 81/123 (65.85%), Postives = 100/123 (81.30%), Query Frame = 1 Query: 28 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEYAV 396 K++ EV A +++ MSAHK RRVIDQIRGR YEETLMILELMPYRACYPI KL+YSAAAN HNMGFNE +L+I++AEVNE T K+ +P+A+GR IKRPTCHIT+VL+D+S D +Y + Sbjct: 3 KSDPDVEVYALGKHIRMSAHKARRVIDQIRGRPYEETLMILELMPYRACYPILKLVYSAAANASHNMGFNETALIISQAEVNEGTITKKLKPRARGRSFAIKRPTCHITIVLQDISKDKKYFI 125
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_SOLTU (50S ribosomal protein L22, chloroplastic OS=Solanum tuberosum GN=rpl22 PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 3.556e-42 Identity = 83/118 (70.34%), Postives = 98/118 (83.05%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 KK EV A ++ MSA K RRVIDQIRGRSYEETLMILELMPYRACYPI KL+YSAAAN +NMG NE +LVI+KAEVNE T+ K+ +P+A+GR IKR TCHIT+V++D+SLDDEY Sbjct: 5 KKTEVYALGEHISMSADKARRVIDQIRGRSYEETLMILELMPYRACYPILKLVYSAAANASYNMGSNETNLVISKAEVNEGTTVKKLKPRARGRSFPIKRSTCHITIVMKDISLDDEY 122 The following BLAST results are available for this feature:
BLAST of CF832670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832670 ID=CF832670; Name=CF832670; organism=Citrus sinensis; type=EST; length=503bpback to top |