CF832671

Overview
NameCF832671
Unique NameCF832671
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832671 vs. ExPASy Swiss-Prot
Match: PARK7_MESAU (Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.488e-23
Identity = 66/167 (39.52%), Postives = 100/167 (59.88%), Query Frame = 2
Query:   38 EKVLVPVANGSEPIEAEITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALLSDCR-YAVFDLIALPGGMPGATDLNESEVLKSIVKKLASAGRLYAAVCASPAVALGSWGLL*GLNATCYPSFMERLAPACAASV-ESRVQEDGKVVTSRGPGTTMEFAVALV 532
            ++ LV +A G+E +E  I +D++RR+G  VTVA +  +  V     V I  D  L D +    +D++ LPGG  GA +L+ES V+K I+K+  S   L AA+CA P  AL +  +  G   T +P   +++      S  ESRV++DG ++TSRGPGT+ EFA+A+V
Sbjct:    4 KRALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKKQGPYDVVVLPGGNLGAQNLSESPVVKEILKEQESRKGLIAAICAGP-TALLAHEIGFGSKVTTHPGAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIV 169          
BLAST of CF832671 vs. ExPASy Swiss-Prot
Match: PARK7_DANRE (Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.488e-23
Identity = 64/167 (38.32%), Postives = 98/167 (58.68%), Query Frame = 2
Query:   38 EKVLVPVANGSEPIEAEITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALLSDC-RYAVFDLIALPGGMPGATDLNESEVLKSIVKKLASAGRLYAAVCASPAVALGSWGLL*GLNATCYPSFMERLAPACAASV-ESRVQEDGKVVTSRGPGTTMEFAVALV 532
            ++ LV +A G+E +E  I +DV+RR+G  VTVA +  +  V     V I  D+ L D  +   +D++ LPGG+ GA +L+ES  +K ++K       L AA+CA P  AL + G+  G   T +P   +++         E+RVQ+DG V+TSRGPGT+ EFA+ +V
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIAVTVAGLAGKEPVQCSREVMICPDSSLEDAHKQGPYDVVLLPGGLLGAQNLSESPAVKEVLKDQEGRKGLIAAICAGPT-ALLAHGIAYGSTVTTHPGAKDKMMAGDHYKYSEARVQKDGNVITSRGPGTSFEFALTIV 169          
BLAST of CF832671 vs. ExPASy Swiss-Prot
Match: PARK7_MOUSE (Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.238e-23
Identity = 66/167 (39.52%), Postives = 100/167 (59.88%), Query Frame = 2
Query:   38 EKVLVPVANGSEPIEAEITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALLSDCR-YAVFDLIALPGGMPGATDLNESEVLKSIVKKLASAGRLYAAVCASPAVALGSWGLL*GLNATCYPSFMERLAPACAASV-ESRVQEDGKVVTSRGPGTTMEFAVALV 532
            ++ LV +A G+E +E  I +DV+RR+G  VTVA +  +  V     V I  D  L D +    +D++ LPGG  GA +L+ES ++K I+K+  S   L AA+CA P  AL +  +  G   T +P   +++      S  ESRV++DG ++TSRGPGT+ EFA+A+V
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKTQGPYDVVVLPGGNLGAQNLSESPMVKEILKEQESRKGLIAAICAGP-TALLAHEVGFGCKVTTHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIV 169          
BLAST of CF832671 vs. ExPASy Swiss-Prot
Match: PARK7_CHICK (Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.235e-22
Identity = 69/169 (40.83%), Postives = 99/169 (58.58%), Query Frame = 2
Query:   38 EKVLVPVANGSEPIEAEITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALLSDCRY-AVFDLIALPGGMPGATDLNESEVLKSIVKKLASAGRLYAAVCASPAVALGSWGLL*GLNATCYPSFMERL---APACAASVESRVQEDGKVVTSRGPGTTMEFAVALV 532
            ++ LV +A G+E +E  I  DV+RR+G  VTVA +  +  V     V I  DA L D R    +D+I LPGG  GA +L+ES  +K I+K   S   L AA+CA P  AL + G+  G     +P   +++   A  C +  ESRV++DG ++TSRGPGT+ EF +A+V
Sbjct:    4 KRALVILAKGAEEMETVIPTDVMRRAGIKVTVAGLTGKEPVQCSRDVLICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESAAVKDILKDQESRKGLIAAICAGP-TALLAHGIGFGSKVITHPLAKDKMMNGAHYCYS--ESRVEKDGNILTSRGPGTSFEFGLAIV 169          
BLAST of CF832671 vs. ExPASy Swiss-Prot
Match: PARK7_RAT (Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.003e-22
Identity = 63/167 (37.72%), Postives = 100/167 (59.88%), Query Frame = 2
Query:   38 EKVLVPVANGSEPIEAEITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALLSDCR-YAVFDLIALPGGMPGATDLNESEVLKSIVKKLASAGRLYAAVCASPAVALGSWGLL*GLNATCYPSFMERLAPACAASV-ESRVQEDGKVVTSRGPGTTMEFAVALV 532
            ++ LV +A G+E +E  I +D++RR+G  VTVA +  +  V     V I  D  L + +    +D++ LPGG  GA +L+ES ++K I+K+  +   L AA+CA P  AL +  +  G   T +P   +++      S  ESRV++DG ++TSRGPGT+ EFA+A+V
Sbjct:    4 KRALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVVICPDTSLEEAKTQGPYDVVVLPGGNLGAQNLSESALVKEILKEQENRKGLIAAICAGP-TALLAHEVGFGCKVTSHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIV 169          
BLAST of CF832671 vs. ExPASy Swiss-Prot
Match: PARK7_HUMAN (Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.045e-21
Identity = 64/167 (38.32%), Postives = 100/167 (59.88%), Query Frame = 2
Query:   38 EKVLVPVANGSEPIEAEITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALLSDCRY-AVFDLIALPGGMPGATDLNESEVLKSIVKKLASAGRLYAAVCASPAVALGSWGLL*GLNATCYPSFMERLAPACAASV-ESRVQEDGKVVTSRGPGTTMEFAVALV 532
            ++ LV +A G+E +E  I +DV+RR+G  VTVA +  +  V     V I  DA L D +    +D++ LPGG  GA +L+ES  +K I+K+  +   L AA+CA P  AL +  +  G   T +P   +++      +  E+RV++DG ++TSRGPGT+ EFA+A+V
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGP-TALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIV 169          
BLAST of CF832671 vs. ExPASy Swiss-Prot
Match: PARK7_CERAE (Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.365e-21
Identity = 63/167 (37.72%), Postives = 100/167 (59.88%), Query Frame = 2
Query:   38 EKVLVPVANGSEPIEAEITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALLSDCRY-AVFDLIALPGGMPGATDLNESEVLKSIVKKLASAGRLYAAVCASPAVALGSWGLL*GLNATCYPSFMERLAPACAASV-ESRVQEDGKVVTSRGPGTTMEFAVALV 532
            ++ LV +A G+E +E  I +DV+RR+G  VT+A +  +  V     V I  DA L D +    +D++ LPGG  GA +L+ES  +K I+K+  +   L AA+CA P  AL +  +  G   T +P   +++      +  E+RV++DG ++TSRGPGT+ EFA+A+V
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTIAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGP-TALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIV 169          
BLAST of CF832671 vs. ExPASy Swiss-Prot
Match: PARK7_BOVIN (Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.365e-21
Identity = 64/167 (38.32%), Postives = 98/167 (58.68%), Query Frame = 2
Query:   38 EKVLVPVANGSEPIEAEITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALLSDCRY-AVFDLIALPGGMPGATDLNESEVLKSIVKKLASAGRLYAAVCASPAVALGSWGLL*GLNATCYPSFMERLAPACAASV-ESRVQEDGKVVTSRGPGTTMEFAVALV 532
            ++ LV +A G+E +E  I +DV+RR+G  VTVA +  +  V     V I  DA L D +    +D++ LPGG  GA +L+ES  +K I+K+      L AA+CA P  AL +  +  G   T +P   +++      S  E+RV++DG ++TSRGPGT+ EFA+ +V
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQEKRKGLIAAICAGP-TALLAHEIGFGSKVTTHPLAKDKMMNGSHYSYSENRVEKDGLILTSRGPGTSFEFALKIV 169          
BLAST of CF832671 vs. ExPASy Swiss-Prot
Match: THIJ_ECOLI (Protein thiJ OS=Escherichia coli (strain K12) GN=thiJ PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.971e-20
Identity = 64/166 (38.55%), Postives = 97/166 (58.43%), Query Frame = 2
Query:   47 LVPVANGSEPIEAEITIDVLRRSGADVTVASV--EKQLRVDACHGVKIVADALLSDCRYAVFDLIALPGGMPGATDLNESEVLKSIVKKLASAGRLYAAVCASPAVALGSWGLL*GLNATCYPSFMERLAPACAASVESRVQEDG--KVVTSRGPGTTMEFAVALV 532
            LV +A GSE  EA  TID+L R G  VT ASV  +  L +    GVK++ADA L +     +D+I LPGG+ GA    +S +L   VK+   +GR+ AA+CA+PA  L    +    N T +P+  +++ PA    ++ RV  D   K++TS+GPGT ++F + ++
Sbjct:    6 LVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKI-PA-EQWLDKRVVWDARVKLLTSQGPGTAIDFGLKII 169          
BLAST of CF832671 vs. ExPASy Swiss-Prot
Match: THIJ_SALTY (Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.179e-19
Identity = 63/168 (37.50%), Postives = 97/168 (57.74%), Query Frame = 2
Query:   41 KVLVPVANGSEPIEAEITIDVLRRSGADVTVASV--EKQLRVDACHGVKIVADALLSDCRYAVFDLIALPGGMPGATDLNESEVLKSIVKKLASAGRLYAAVCASPAVALGSWGLL*GLNATCYPSFMERLAPACAASVESRVQEDG--KVVTSRGPGTTMEFAVALV 532
            + LV +A GSE  EA  TID+L R G  VT ASV  +  L +    GVK++ADA L +     +D+I LPGG+ GA    +S +L   VK+   +GR+ AA+CA+ A  L    +    N T +P+  +++ PA    ++ RV  D   K++TS+GPGT ++F + ++
Sbjct:    4 QALVCLAPGSEETEAVTTIDLLVRGGIHVTTASVASDGNLTIVCSRGVKLLADAPLVEVADGDYDIIVLPGGIKGAECFRDSPLLVETVKQFHRSGRIVAAICAAAATVLVPHDIFPIGNMTGFPALKDKI-PA-EQWLDKRVVWDARVKLLTSQGPGTAIDFGLKII 169          
The following BLAST results are available for this feature:
BLAST of CF832671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
PARK7_MESAU2.488e-2339.52Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1... [more]
PARK7_DANRE2.488e-2338.32Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1[more]
PARK7_MOUSE7.238e-2339.52Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1[more]
PARK7_CHICK1.235e-2240.83Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1[more]
PARK7_RAT8.003e-2237.72Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV... [more]
PARK7_HUMAN1.045e-2138.32Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2[more]
PARK7_CERAE1.365e-2137.72Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE... [more]
PARK7_BOVIN1.365e-2138.32Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1[more]
THIJ_ECOLI1.971e-2038.55Protein thiJ OS=Escherichia coli (strain K12) GN=t... [more]
THIJ_SALTY2.179e-1937.50Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02D23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832671 ID=CF832671; Name=CF832671; organism=Citrus sinensis; type=EST; length=532bp
CTCCTTCTCAGCTGCAGCTACAATGTCTTCCACTTCCGAAAAGGTTTTGG
TGCCTGTTGCGAACGGGAGTGAGCCGATTGAGGCCGAGATAACGATTGAT
GTTTTGAGAAGGTCTGGAGCTGACGTCACGGTTGCATCTGTGGAGAAACA
GCTTCGTGTCGACGCGTGTCATGGTGTCAAGATTGTCGCTGATGCTCTCC
TGTCTGACTGCCGCTACGCCGTTTTTGATCTTATAGCTCTTCCCGGTGGC
ATGCCCGGTGCTACCGATCTGAACGAATCCGAGGTATTAAAAAGCATTGT
GAAGAAGCTCGCCTCAGCTGGGCGTCTTTATGCTGCTGTCTGTGCTTCAC
CTGCTGTGGCATTAGGGTCTTGGGGTCTGTTGTAGGGATTGAATGCTACT
TGTTATCCGTCATTTATGGAGCGATTAGCTCCTGCTTGTGCAGCATCTGT
TGAATCAAGAGTACAGGAGGATGGTAAAGTTGTTACTAGTCGTGGACCGG
GCACTACCATGGAGTTTGCCGTTGCACTTGTT
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