CF832711
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.023e-45 Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = -1 Query: 384 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFGSHIP 686 RIREKYPDRIPVIVEKAE+SDIP IDKKKYLVPADLTVGQFV+VIRKRIKLSAEKAIFIFVDNVLPP GA+MS++ EEKKD+DGFLYVTYSGENTFG P Sbjct: 21 RIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGFGSP 121
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.119e-44 Identity = 85/98 (86.73%), Postives = 96/98 (97.96%), Query Frame = -1 Query: 393 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFGS 686 RIREKYPDRIPVIVEKAE+S++PNIDKKKYLVP+DLTVGQFV+VIRKRIKLSAEKAIFIFVDNVLPPTG +MS++ E+KKDEDGFLY+TYSGENTFG+ Sbjct: 22 RIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFGA 119
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 9.473e-44 Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = -1 Query: 396 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFG 686 RIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFV+V+RKRIKLSAEKAIFIFV N LPPT A+MSAI EE KDEDGFLY+TYSGENTFG Sbjct: 21 RIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 9.473e-44 Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = -1 Query: 396 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFG 686 RIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFV+V+RKRIKLSAEKAIFIFV N LPPT A+MSAI EE KDEDGFLY+TYSGENTFG Sbjct: 21 RIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8G_ARATH (Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.237e-43 Identity = 86/98 (87.76%), Postives = 94/98 (95.92%), Query Frame = -1 Query: 393 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFGS 686 RIREKY DR+PVIVEK+E+SDIPNIDKKKYLVPADLTVGQFV+VIRKRI+LSAEKAIFIFVDNVLPPTGA+MS I +E K+EDGFLYVTYSGENTFGS Sbjct: 21 RIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFGS 118
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana GN=ATG8C PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.756e-43 Identity = 84/97 (86.60%), Postives = 92/97 (94.85%), Query Frame = -1 Query: 396 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFG 686 RIREKYPDRIPVIVE+AERSD+PNIDKKKYLVPADLTVGQFV+V+RKRIKLSAEKAIF+FV N LPPT A+MSAI +E KDEDGFLY+TYSGENTFG Sbjct: 21 RIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 3.047e-42 Identity = 85/97 (87.63%), Postives = 90/97 (92.78%), Query Frame = -1 Query: 396 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFG 686 RIREKY DRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFV+V+RKRIKLS EKAIFIFV N LPPT A+MSAI EE KDEDGFLY+TYSGENTFG Sbjct: 21 RIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.047e-42 Identity = 85/97 (87.63%), Postives = 90/97 (92.78%), Query Frame = -1 Query: 396 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFG 686 RIREKY DRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFV+V+RKRIKLS EKAIFIFV N LPPT A+MSAI EE KDEDGFLY+TYSGENTFG Sbjct: 21 RIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8A_ARATH (Autophagy-related protein 8a OS=Arabidopsis thaliana GN=ATG8A PE=1 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 3.980e-42 Identity = 83/98 (84.69%), Postives = 91/98 (92.86%), Query Frame = -1 Query: 393 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFGS 686 RIREKYPDRIPVIVEKA +SD+P+IDKKKYLVPADLTVGQFV+V+RKRIKL AEKAIF+FV N LPPT A+MSAI EE KDEDGFLY+TYSGENTFGS Sbjct: 21 RIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 118
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.198e-42 Identity = 82/97 (84.54%), Postives = 92/97 (94.85%), Query Frame = -1 Query: 396 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFG 686 RIREKYPDRIPVIVE+AE+SD+P+ID+KKYLVPADLTVGQFV+V+RKRIKLS EKAIFIFV N+LPPT AIMSAI EE KDEDGFLY++YSGENTFG Sbjct: 21 RIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117 The following BLAST results are available for this feature:
BLAST of CF832711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832711 ID=CF832711; Name=CF832711; organism=Citrus sinensis; type=EST; length=686bpback to top |