CF832711

Overview
NameCF832711
Unique NameCF832711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.023e-45
Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = -1
Query:  384 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFGSHIP 686
            RIREKYPDRIPVIVEKAE+SDIP IDKKKYLVPADLTVGQFV+VIRKRIKLSAEKAIFIFVDNVLPP GA+MS++ EEKKD+DGFLYVTYSGENTFG   P
Sbjct:   21 RIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGFGSP 121          
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.119e-44
Identity = 85/98 (86.73%), Postives = 96/98 (97.96%), Query Frame = -1
Query:  393 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFGS 686
            RIREKYPDRIPVIVEKAE+S++PNIDKKKYLVP+DLTVGQFV+VIRKRIKLSAEKAIFIFVDNVLPPTG +MS++ E+KKDEDGFLY+TYSGENTFG+
Sbjct:   22 RIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFGA 119          
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.473e-44
Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = -1
Query:  396 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFG 686
            RIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFV+V+RKRIKLSAEKAIFIFV N LPPT A+MSAI EE KDEDGFLY+TYSGENTFG
Sbjct:   21 RIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 9.473e-44
Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = -1
Query:  396 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFG 686
            RIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFV+V+RKRIKLSAEKAIFIFV N LPPT A+MSAI EE KDEDGFLY+TYSGENTFG
Sbjct:   21 RIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8G_ARATH (Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.237e-43
Identity = 86/98 (87.76%), Postives = 94/98 (95.92%), Query Frame = -1
Query:  393 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFGS 686
            RIREKY DR+PVIVEK+E+SDIPNIDKKKYLVPADLTVGQFV+VIRKRI+LSAEKAIFIFVDNVLPPTGA+MS I +E K+EDGFLYVTYSGENTFGS
Sbjct:   21 RIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFGS 118          
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana GN=ATG8C PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.756e-43
Identity = 84/97 (86.60%), Postives = 92/97 (94.85%), Query Frame = -1
Query:  396 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFG 686
            RIREKYPDRIPVIVE+AERSD+PNIDKKKYLVPADLTVGQFV+V+RKRIKLSAEKAIF+FV N LPPT A+MSAI +E KDEDGFLY+TYSGENTFG
Sbjct:   21 RIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117          
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 3.047e-42
Identity = 85/97 (87.63%), Postives = 90/97 (92.78%), Query Frame = -1
Query:  396 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFG 686
            RIREKY DRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFV+V+RKRIKLS EKAIFIFV N LPPT A+MSAI EE KDEDGFLY+TYSGENTFG
Sbjct:   21 RIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.047e-42
Identity = 85/97 (87.63%), Postives = 90/97 (92.78%), Query Frame = -1
Query:  396 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFG 686
            RIREKY DRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFV+V+RKRIKLS EKAIFIFV N LPPT A+MSAI EE KDEDGFLY+TYSGENTFG
Sbjct:   21 RIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8A_ARATH (Autophagy-related protein 8a OS=Arabidopsis thaliana GN=ATG8A PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 3.980e-42
Identity = 83/98 (84.69%), Postives = 91/98 (92.86%), Query Frame = -1
Query:  393 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFGS 686
            RIREKYPDRIPVIVEKA +SD+P+IDKKKYLVPADLTVGQFV+V+RKRIKL AEKAIF+FV N LPPT A+MSAI EE KDEDGFLY+TYSGENTFGS
Sbjct:   21 RIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 118          
BLAST of CF832711 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.198e-42
Identity = 82/97 (84.54%), Postives = 92/97 (94.85%), Query Frame = -1
Query:  396 RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVHVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAICEEKKDEDGFLYVTYSGENTFG 686
            RIREKYPDRIPVIVE+AE+SD+P+ID+KKYLVPADLTVGQFV+V+RKRIKLS EKAIFIFV N+LPPT AIMSAI EE KDEDGFLY++YSGENTFG
Sbjct:   21 RIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117          
The following BLAST results are available for this feature:
BLAST of CF832711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8F_ARATH5.023e-4588.12Autophagy-related protein 8f OS=Arabidopsis thalia... [more]
ATG8E_ARATH1.119e-4486.73Autophagy-related protein 8e OS=Arabidopsis thalia... [more]
ATG8C_ORYSJ9.473e-4489.69Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8C_ORYSI9.473e-4489.69Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8G_ARATH1.237e-4387.76Autophagy-related protein 8g OS=Arabidopsis thalia... [more]
ATG8C_ARATH2.756e-4386.60Autophagy-related protein 8c OS=Arabidopsis thalia... [more]
ATG8B_ORYSJ3.047e-4287.63Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8B_ORYSI3.047e-4287.63Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8A_ARATH3.980e-4284.69Autophagy-related protein 8a OS=Arabidopsis thalia... [more]
ATG8D_ARATH5.198e-4284.54Autophagy-related protein 8d OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02E20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02E20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832711 ID=CF832711; Name=CF832711; organism=Citrus sinensis; type=EST; length=686bp
CTTTTCAGGTTTTTTTTTTTTTTACTTCTAATAAGTTGGTCCCATTTACA
TCTTAAAAATAGCAATGGCTCACAAACACGCCGAATCCGGGTTCCAAGTC
GAGTATTTCGTGATAAAGATTACAGATTGAAACCAGCAGCAAATACCCAA
ACCGAAAAAAAATCATCAAAATAGAAAGGCAAGAAAGAAACTTGACATAT
TATGCCTTTAAGACTTATATACAATAGGTAACTGTGCATATTATCACTGG
CAATGGCTTTATAAAATATAAAATATGCCCGATAAAGGAATATTCAACGG
AAAGCAAGGATGACAATTGAAATAAAAATGCGGTCGCACAAGAAACCAGC
ACAATGAGCAGATAGATAATCACAAGGCTAAACTGGGATGTGGCTTCCAA
ATGTGTTCTCCCCACTGTAAGTCACATAAAGAAAACCATCTTCATCCTTT
TTCTCTTCGCATATGGCAGACATAATTGCACCTGTAGGTGGGAGCACATT
ATCCACAAAAATAAATATCGCCTTTTCAGCACTCAGTTTGATCCTTTTAC
GGATGACATGAACAAATTGTCCTACAGTCAGGTCAGCTGGAACAAGATAC
TTCTTCTTATCTATATTTGGTATGTCACTTCGCTCTGCCTTCTCCACAAT
CACCGGAATCCTGTCAGGGTACTTCTCCCTAATCCT
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