CF832795

Overview
NameCF832795
Unique NameCF832795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_ARATH (Probable phosphoribosylformylglycinamidine synthase, chloroplastic OS=Arabidopsis thaliana GN=At1g74260 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.197e-40
Identity = 68/81 (83.95%), Postives = 75/81 (92.59%), Query Frame = 2
Query:    2 LAPPIYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREW 244
            LAP  YCDDDGN TE YPFN+NGSPLG+AAICSPDGRHLAMMPHPERCFLMWQ+PWYP +W+V+K GPSPWLKMFQNAR+W
Sbjct: 1303 LAPLRYCDDDGNVTEAYPFNLNGSPLGIAAICSPDGRHLAMMPHPERCFLMWQFPWYPTSWDVEKAGPSPWLKMFQNARDW 1383          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_MOUSE (Phosphoribosylformylglycinamidine synthase OS=Mus musculus GN=Pfas PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.869e-23
Identity = 49/85 (57.65%), Postives = 58/85 (68.24%), Query Frame = 2
Query:    2 LAPPIYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS*D 256
            L P  + DDDGNPTE YP N NGSP G+A ICS DGRHLA+MPHPER   +WQ+ W P  ++V     SPWL++F NAR W   D
Sbjct: 1253 LVPLHWADDDGNPTEQYPLNPNGSPGGIAGICSQDGRHLALMPHPERAVRLWQWAWRPSPFDV--LPTSPWLQLFINARNWTQED 1335          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_DICDI (Phosphoribosylformylglycinamidine synthase OS=Dictyostelium discoideum GN=purL PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 6.600e-23
Identity = 48/85 (56.47%), Postives = 62/85 (72.94%), Query Frame = 2
Query:    2 LAPPIYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKG---PSPWLKMFQNAREWC 247
            L+P  Y DDDG  TE YPFN +G+  G A++CS DGRHLA+MPHPER FL WQ+P+ P+N   +  G   PSPW+K+FQNA+ +C
Sbjct: 1267 LSPIRYVDDDGEITESYPFNPSGTQEGFASLCSKDGRHLAIMPHPERSFLSWQWPFMPENIKQNVGGLDQPSPWIKIFQNAKSFC 1351          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_HUMAN (Phosphoribosylformylglycinamidine synthase OS=Homo sapiens GN=PFAS PE=1 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 1.126e-22
Identity = 50/81 (61.73%), Postives = 56/81 (69.14%), Query Frame = 2
Query:    2 LAPPIYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREW 244
            LAP  + DDDGNPTE YP N NGSP GVA ICS DGRHLA+MPHPER    WQ+ W P  +  D    SPWL++F NAR W
Sbjct: 1254 LAPLHWADDDGNPTEQYPLNPNGSPGGVAGICSCDGRHLAVMPHPERAVRPWQWAWRPPPF--DTLTTSPWLQLFINARNW 1332          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_DROME (Phosphoribosylformylglycinamidine synthase OS=Drosophila melanogaster GN=ade2 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 2.508e-22
Identity = 45/78 (57.69%), Postives = 55/78 (70.51%), Query Frame = 2
Query:   17 YCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVD-KKGPSPWLKMFQNAREWC 247
            Y DD G PTE+YP N NGSP G+A +CS DGRHLA+MPHPERC  M+Q+P+ P ++ V   +  SPW  MF NA  WC
Sbjct: 1272 YVDDVGKPTELYPLNPNGSPQGIAGLCSSDGRHLALMPHPERCSSMYQWPYVPSSFEVSPTQSESPWQIMFNNAYNWC 1349          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_METFK (Phosphoribosylformylglycinamidine synthase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=purL1 PE=3 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 6.392e-18
Identity = 39/76 (51.32%), Postives = 50/76 (65.79%), Query Frame = 2
Query:   17 YCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREW 244
            Y D+ G PTEVYPFN NGSP G+  + + DGR   MMPHPER F   Q+ W+P  W  D     PW++MF+NAR++
Sbjct: 1220 YVDNSGLPTEVYPFNPNGSPQGITGLTTADGRFSIMMPHPERVFRTVQHSWHPDGWGED----GPWIRMFRNARKF 1291          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_RALSO (Phosphoribosylformylglycinamidine synthase OS=Ralstonia solanacearum GN=purL PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 8.348e-18
Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 2
Query:   17 YCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 241
            Y D+ G  T+ YP N NGSP G+A++ + DGR   +MPHPER F   Q  W+PK+W     G SPW++MF+NAR+
Sbjct: 1292 YVDNRGEVTQTYPLNPNGSPQGIASVTTHDGRFTVLMPHPERVFRAVQMSWHPKDWAAAGDGSSPWMRMFRNARK 1366          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_YEAST (Phosphoribosylformylglycinamidine synthase OS=Saccharomyces cerevisiae GN=ADE6 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 7.814e-16
Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = 2
Query:   17 YCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREW 244
            Y D+ GN TE +PFN NGS  G+A I SP+GR LAMMPHPER   +    WYP+    +  G  PW+++F++AR W
Sbjct: 1281 YVDNYGNVTERFPFNPNGSTNGIAGIKSPNGRVLAMMPHPERVCRLEANSWYPEGKYEEWGGYGPWIRLFRSARRW 1356          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_HAHCH (Phosphoribosylformylglycinamidine synthase OS=Hahella chejuensis (strain KCTC 2396) GN=purL PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.021e-15
Identity = 36/76 (47.37%), Postives = 47/76 (61.84%), Query Frame = 2
Query:   17 YCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREW 244
            + D+ G PT  +PFN NGSPLG+ ++C+ DGR   MMPHPER F      W P  W+ D      W++MF+NAR W
Sbjct: 1225 FVDNYGRPTMSHPFNPNGSPLGITSVCNDDGRITVMMPHPERVFRAVANSWRPSAWSED----GAWMRMFRNARVW 1296          
BLAST of CF832795 vs. ExPASy Swiss-Prot
Match: PUR4_PSEHT (Phosphoribosylformylglycinamidine synthase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=purL PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.333e-15
Identity = 38/75 (50.67%), Postives = 46/75 (61.33%), Query Frame = 2
Query:   17 YCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 241
            + D+ GNPT  YP N NGSP G+  I S DGR   MMPHPER F      W+P  W  D    SPW++MF+NAR+
Sbjct: 1223 FVDNYGNPTTQYPANPNGSPEGITGITSTDGRATVMMPHPERVFRAVANSWHPDEWRED----SPWMRMFRNARK 1293          
The following BLAST results are available for this feature:
BLAST of CF832795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
PUR4_ARATH1.197e-4083.95Probable phosphoribosylformylglycinamidine synthas... [more]
PUR4_MOUSE3.869e-2357.65Phosphoribosylformylglycinamidine synthase OS=Mus ... [more]
PUR4_DICDI6.600e-2356.47Phosphoribosylformylglycinamidine synthase OS=Dict... [more]
PUR4_HUMAN1.126e-2261.73Phosphoribosylformylglycinamidine synthase OS=Homo... [more]
PUR4_DROME2.508e-2257.69Phosphoribosylformylglycinamidine synthase OS=Dros... [more]
PUR4_METFK6.392e-1851.32Phosphoribosylformylglycinamidine synthase OS=Meth... [more]
PUR4_RALSO8.348e-1849.33Phosphoribosylformylglycinamidine synthase OS=Rals... [more]
PUR4_YEAST7.814e-1650.00Phosphoribosylformylglycinamidine synthase OS=Sacc... [more]
PUR4_HAHCH1.021e-1547.37Phosphoribosylformylglycinamidine synthase OS=Hahe... [more]
PUR4_PSEHT1.333e-1550.67Phosphoribosylformylglycinamidine synthase OS=Pseu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02H03_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832795 ID=CF832795; Name=CF832795; organism=Citrus sinensis; type=EST; length=516bp
TTTGGCTCCACCAATATATTGTGATGATGATGGAAATCCTACAGAAGTTT
ACCCTTTTAATGTGAATGGCTCTCCCTTAGGAGTGGCAGCAATTTGTTCA
CCCGATGGAAGACATCTTGCTATGATGCCTCATCCAGAGCGTTGCTTCTT
AATGTGGCAGTACCCGTGGTACCCCAAGAACTGGAATGTGGACAAAAAGG
GCCCTAGCCCATGGTTAAAGATGTTCCAAAATGCCAGAGAATGGTGTTCT
TGAGATGGGTTAGTAACTCCCCCTTTCCATTTTCCCTTCAGGAAGGTTGC
TGCCTCTAATTGCTCGCTGATTCATTTCTGTGCTGATGTATGGTATGTTT
GATGCCGGGAAACCAGGGCTCTGATTGCTACAAAAAAAATCTGCAGACAT
TTTGAAGTGAGTTGTATTTGGCTTCTGATTTAGGCCAATTTTAGAAGACA
TCCGATGTGTTAATTTCTTTTGATAATTTTATTTGCAAGAATTACGTCCC
AAAAAAAAAAAAAAAA
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