CF832815

Overview
NameCF832815
Unique NameCF832815
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length481
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9029 contig Csv1_Contig9029:276..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832815 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 7.733e-49
Identity = 90/115 (78.26%), Postives = 98/115 (85.22%), Query Frame = -3
Query:  135 FTNMNSMRNLFIPGVALFLGLSVPEYFSESPPKALHGPAHTRAGWFNDFLNTILFSSPTVGLIVAVFLDNPLDYKGSAKDRGMPWGVKFRTFKGDPRNEEFYTLPFTLIRFFPPS 479
            FTNMNS+RNLFI GV+LFLGLS+PEYF +   KALHGPAHT AGWFNDFLNTI  SSP V L+VAVFLDN LDYK +A+DRG+PW  KFRTFKGD RNEEFYTLPF L RFFPPS
Sbjct:  410 FTNMNSLRNLFIVGVSLFLGLSIPEYFRDFSMKALHGPAHTNAGWFNDFLNTIFLSSPMVALMVAVFLDNTLDYKETARDRGLPWWAKFRTFKGDSRNEEFYTLPFNLNRFFPPS 524          
BLAST of CF832815 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.462e-39
Identity = 74/115 (64.35%), Postives = 91/115 (79.13%), Query Frame = -3
Query:  135 FTNMNSMRNLFIPGVALFLGLSVPEYFSESPPKALHGPAHTRAGWFNDFLNTILFSSPTVGLIVAVFLDNPLDYKGSAKDRGMPWGVKFRTFKGDPRNEEFYTLPFTLIRFFPPS 479
            FTNMNSMRNL I G++LFLG+S+P++F++      +G  HT AGWFN FLNT+  S  TVGLI+AVF+DN ++ + S KDRGMPW VKFRTF+GD RNEEFYTLPF L RFFPP+
Sbjct:  406 FTNMNSMRNLMITGLSLFLGISIPQFFAQYWDARHYGLVHTNAGWFNAFLNTLFMSPATVGLIIAVFMDNTMEVERSKKDRGMPWWVKFRTFRGDNRNEEFYTLPFNLNRFFPPT 520          
BLAST of CF832815 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.676e-27
Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = -3
Query:  141 FTNMNSMRNLFIPGVALFLGLSVPEYFSESPPKALHGPAHTRAGWFNDFLNTILFSSPTVGLIVAVFLDNPLDYKGSA--KDRGMPWGVKFRTFKGDPRNEEFYTLPFTLIRFFP 479
            F N+NS R  FI G ++FLGLS+P+YF+E      +GP HT A WFND +N    S P V   VA FLDN L  K S+  KDRG  W  KFR+FKGD R+EEFY+LPF L ++FP
Sbjct:  416 FCNLNSFRTKFILGFSVFLGLSIPQYFNEYTAIKGYGPVHTGARWFNDMVNVPFSSEPFVAGSVAFFLDNTLHKKDSSIRKDRGKHWWDKFRSFKGDTRSEEFYSLPFNLNKYFP 530          
BLAST of CF832815 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.201e-25
Identity = 59/115 (51.30%), Postives = 71/115 (61.74%), Query Frame = -3
Query:  141 FTNMNSMRNLFIPGVALFLGLSVPEYFSESPPKALHGPAHTRAGWFNDFLNTILFSSPTVGLIVAVFLDNPLDYKGSA--KDRGMPWGVKFRTFKGDPRNEEFYTLPFTLIRFFP 479
            F N+NS R LFI G ++FLGLS+P+YF+E      +GP HT A WFND +N    S   VG  VA  LD  L  K  +  KDRG  W  +F TFK DPR EEFY LPF L ++FP
Sbjct:  412 FCNLNSFRTLFILGFSIFLGLSIPQYFNEHTAIKGYGPVHTGARWFNDMVNVPFSSKAFVGGCVAYLLDTTLHKKDGSIRKDRGKHWWDRFWTFKNDPRTEEFYALPFNLNKYFP 526          
BLAST of CF832815 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 7.787e-25
Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = -3
Query:  141 FTNMNSMRNLFIPGVALFLGLSVPEYFSESPPKALHGPAHTRAGWFNDFLNTILFSSPTVGLIVAVFLDNPLDYKGSA--KDRGMPWGVKFRTFKGDPRNEEFYTLPFTLIRFFP 479
            F N+NS R  FI G ++F+GLS+P+YF++      +GP HT A WFND +N    S   V  I+A FLD  +  K SA  KDRGM W  +F +FK D R+EEFY+LPF L ++FP
Sbjct:  422 FCNLNSFRTKFILGFSVFMGLSIPQYFNQYTAVNKYGPVHTHARWFNDMINVPFSSKAFVAGILAFFLDVTMSSKDSATRKDRGMFWWDRFMSFKSDTRSEEFYSLPFNLNKYFP 536          
BLAST of CF832815 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 7.787e-25
Identity = 53/114 (46.49%), Postives = 75/114 (65.79%), Query Frame = -3
Query:  141 FTNMNSMRNLFIPGVALFLGLSVPEYFSESPPKALHGPAHTRAGWFNDFLNTILFSSPTVGLIVAVFLDNPLDYKGSAKD-RGMPWGVKFRTFKGDPRNEEFYTLPFTLIRFFP 479
            FT+ NSMRN+++ GV+LFL LS+ +YF  +  +A +GP  T  GWFND LNTI  S+P V  I+A  LDN L+ + ++ D RG+PW   F+   GD RN+EFY++P  +    P
Sbjct:  434 FTDTNSMRNMYVIGVSLFLSLSIAQYFLANTSRAGYGPVRTAGGWFNDILNTIFASAPLVATILATILDNTLEARHASDDARGIPWWKPFQHRNGDGRNDEFYSMPLRINELMP 547          
BLAST of CF832815 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 8.059e-22
Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = -3
Query:  141 FTNMNSMRNLFIPGVALFLGLSVPEYFSESPPKALHGPAHTRAGWFNDFLNTILFSSPTVGLIVAVFLDN--PLDYKGSAKDRGMPWGVKFRTFKGDPRNEEFYTLPFTLIRFFP 479
            F N+NS R  FI G ++F+GLS+P+YF +      +GP  T A WFN+ +N    S   V  I+A FLD   P   K + KDRG+ W  +F++F+ D R+EEFY+LP  L ++FP
Sbjct:  423 FCNLNSFRTKFILGFSIFMGLSIPQYFYQYTTLETYGPVRTSATWFNNIINVPFSSKAFVSGILAFFLDTTLPPKDKTTKKDRGLVWWKRFKSFQSDNRSEEFYSLPLNLSKYFP 537          
BLAST of CF832815 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.520e-20
Identity = 52/115 (45.22%), Postives = 68/115 (59.13%), Query Frame = -3
Query:  141 FTNMNSMRNLFIPGVALFLGLSVPEYFSESPPKALHGPAHTRAGWFNDFLNTILFSSPTVGLIVAVFLDNPLDYKGSA--KDRGMPWGVKFRTFKGDPRNEEFYTLPFTLIRFFP 479
            F N+NS RN FI G ++F+GLSV +YF+E    +  GP HTR   FN  +  I  S+ TVG++ A  LD    Y  ++  +D G  W  KFR +  D R EEFY LP+ L RFFP
Sbjct:  410 FCNLNSFRNKFILGFSIFIGLSVAQYFTEYLFISGRGPVHTRTSAFNVIMQVIFSSAATVGIMAAFLLDCTHSYGHASVRRDSGRHWWEKFRVYHTDTRTEEFYALPYNLNRFFP 524          
BLAST of CF832815 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 6.385e-19
Identity = 52/115 (45.22%), Postives = 70/115 (60.87%), Query Frame = -3
Query:  141 FTNMNSMRNLFIPGVALFLGLSVPEYFSESPPKALHGPAHTRAGWFNDFLNTILFSSPTVGLIVAVFLD-NPLDYKGSAK-DRGMPWGVKFRTFKGDPRNEEFYTLPFTLIRFFP 479
            + N+NS+R  FI  ++LFLGLS+P+YF         GP HT +  FN  +N I  S  TV  I+A  LD   L ++ S K DRG  W  KF+++K D R+EEFY LP+ L R+FP
Sbjct:  411 YCNLNSLRTKFILSISLFLGLSIPQYFRVYEMFFGFGPVHTHSVAFNVMVNVIFSSPATVAAILAYLLDCTHLYWEASVKKDRGWFWWEKFKSYKYDGRSEEFYRLPYGLSRYFP 525          
BLAST of CF832815 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.472e-15
Identity = 46/115 (40.00%), Postives = 60/115 (52.17%), Query Frame = -3
Query:  141 FTNMNSMRNLFIPGVALFLGLSVPEYFSESPPKALHGPAHTRAGWFNDFLNTILFSSPTVGLIVAVFLDNPL--DYKGSAKDRGMPWGVKFRTFKGDPRNEEFYTLPFTLIRFFP 479
            F N+NS    FI G + F+ +S+P+YF E          H+   W  D +  I  S  TV  I+A+ LD  L  D   + KD GM W  KFR +  D RN+EFY LP  L +FFP
Sbjct:  427 FCNLNSFNIKFILGFSFFMAISIPQYFREYYNGGWRSDHHSN--WLEDMIRVIFMSHTTVAAIIAIVLDCTLCRDSDEAKKDCGMKWWDKFRLYNLDVRNDEFYGLPCRLNKFFP 539          
The following BLAST results are available for this feature:
BLAST of CF832815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
NAT2_ARATH7.733e-4978.26Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
NAT1_ARATH1.462e-3964.35Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT6_ARATH1.676e-2753.91Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT5_ARATH1.201e-2551.30Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
NAT7_ARATH7.787e-2548.70Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT3_ARATH7.787e-2546.49Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]
NAT8_ARATH8.059e-2243.48Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]
NAT4_ARATH1.520e-2045.22Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
LPE1_MAIZE6.385e-1945.22Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]
NAT10_ARATH1.472e-1540.00Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02H19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02H19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832815 ID=CF832815; Name=CF832815; organism=Citrus sinensis; type=EST; length=481bp
AGAAACCACGAGTCTTCTTTTTCGTCTGCCATGCAAAACATATCCATCGT
CTGTCTCAAGTCTTCTCTGCAGGAACTCGGAGTTATCATTTCTTTTCTAA
AAATGACAGCCTCTTTTAATATGACGCTACTTCATGATGGAGGGAAAAAA
CGGATGAGGGTGAAAGGGAGGGTGTAAAATTCCTCATTCCGGGGGTCTCC
TTTAAATGTGCGGAATTTAACCCCCCATGGCATGCCTCTGTCTTTGGCAC
TGCCCTTGTAATCGAGTGGGTTGTCCAAAAAAACAGCGACAATCAACCCA
ACGGTTGGAGATGAGAACAATATGGTGTTCAGGAAGTCATTGAACCATCC
AGCCCTGGTGTGAGCAGGACCATGAAGAGCCTTGGGGGGGGATTCGCTGA
AGTATTCAGGAACCGACAAACCTAAGAAGAGGGCTACACCGGGGATGAAG
AGGTTCCTCATTGAGTTCATGTTTGTGAATT
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