CF833042
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833042 vs. ExPASy Swiss-Prot
Match: RS272_ARATH (40S ribosomal protein S27-2 OS=Arabidopsis thaliana GN=RPS27B PE=2 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 1.546e-37 Identity = 73/86 (84.88%), Postives = 77/86 (89.53%), Query Frame = -1 Query: 186 MVLQNDIDLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD 443 MVLQNDIDLLNPPA KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQ++LCQPTGG+A+LTEGCSFRRKGD Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTILCQPTGGKAKLTEGCSFRRKGD 86
BLAST of CF833042 vs. ExPASy Swiss-Prot
Match: RS27_HORVU (40S ribosomal protein S27 OS=Hordeum vulgare GN=RPS27 PE=3 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 2.233e-36 Identity = 73/86 (84.88%), Postives = 75/86 (87.21%), Query Frame = -1 Query: 186 MVLQNDIDLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD 443 MVLQNDIDLLNPPA KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC CQ+VLCQPTGG+ARLTEGCSFRRKGD Sbjct: 1 MVLQNDIDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRKGD 86
BLAST of CF833042 vs. ExPASy Swiss-Prot
Match: RS271_ARATH (40S ribosomal protein S27-1 OS=Arabidopsis thaliana GN=RPS27A PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.600e-34 Identity = 68/84 (80.95%), Postives = 74/84 (88.10%), Query Frame = -1 Query: 192 MVLQNDIDLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 443 MVLQNDIDLLNPPA KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CGNCQ++LC PTGG+A+LTEGCSFR+K Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGNCQTLLCTPTGGKAKLTEGCSFRKK 84
BLAST of CF833042 vs. ExPASy Swiss-Prot
Match: RS273_ARATH (40S ribosomal protein S27-3 OS=Arabidopsis thaliana GN=RPS27D PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 2.090e-34 Identity = 69/84 (82.14%), Postives = 73/84 (86.90%), Query Frame = -1 Query: 192 MVLQNDIDLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 443 MVLQNDIDLL+PP KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQ+VLCQPTGG+ARL EGCSFR+K Sbjct: 1 MVLQNDIDLLHPPPELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGKARLQEGCSFRKK 84
BLAST of CF833042 vs. ExPASy Swiss-Prot
Match: RS27_CHLRE (40S ribosomal protein S27 OS=Chlamydomonas reinhardtii GN=RPS27 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.554e-32 Identity = 67/86 (77.91%), Postives = 70/86 (81.40%), Query Frame = -1 Query: 186 MVLQNDIDLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD 443 MVL +DIDLLNPPA KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CG+C SVLC PTG RLTEGCSFRRK D Sbjct: 1 MVLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGSCSSVLCTPTGWPRRLTEGCSFRRKSD 86
BLAST of CF833042 vs. ExPASy Swiss-Prot
Match: RS27_SCHPO (40S ribosomal protein S27 OS=Schizosaccharomyces pombe GN=rps27 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.512e-27 Identity = 56/78 (71.79%), Postives = 62/78 (79.49%), Query Frame = -1 Query: 192 IDLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 425 +DLLNP K+LVQ P SFFMDVKC GCFNITTVFSH+QTVV+CG+C SVLCQPTGG+ARL EGCSFRRK Sbjct: 5 VDLLNPSHESEMRKHKLKQLVQGPRSFFMDVKCPGCFNITTVFSHAQTVVICGSCASVLCQPTGGKARLMEGCSFRRK 82
BLAST of CF833042 vs. ExPASy Swiss-Prot
Match: RS27_XENLA (40S ribosomal protein S27 OS=Xenopus laevis GN=rps27 PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.773e-25 Identity = 54/77 (70.13%), Postives = 61/77 (79.22%), Query Frame = -1 Query: 192 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 422 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPTPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CF833042 vs. ExPASy Swiss-Prot
Match: RS27_RAT (40S ribosomal protein S27 OS=Rattus norvegicus GN=Rps27 PE=2 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.773e-25 Identity = 54/77 (70.13%), Postives = 61/77 (79.22%), Query Frame = -1 Query: 192 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 422 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CF833042 vs. ExPASy Swiss-Prot
Match: RS27_MOUSE (40S ribosomal protein S27 OS=Mus musculus GN=Rps27 PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.773e-25 Identity = 54/77 (70.13%), Postives = 61/77 (79.22%), Query Frame = -1 Query: 192 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 422 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CF833042 vs. ExPASy Swiss-Prot
Match: RS27_HUMAN (40S ribosomal protein S27 OS=Homo sapiens GN=RPS27 PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.773e-25 Identity = 54/77 (70.13%), Postives = 61/77 (79.22%), Query Frame = -1 Query: 192 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 422 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82 The following BLAST results are available for this feature:
BLAST of CF833042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF833042 ID=CF833042; Name=CF833042; organism=Citrus sinensis; type=EST; length=503bpback to top |