CF833045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833045 vs. ExPASy Swiss-Prot
Match: NSA2_DICDI (Ribosome biogenesis protein NSA2 homolog OS=Dictyostelium discoideum GN=nsa2 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.100e-37 Identity = 73/112 (65.18%), Postives = 93/112 (83.04%), Query Frame = 1 Query: 22 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRS*IAQKALGIKGKMFAKKRYAEKALMRKTLAMHEESSRRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKKKK 357 MPQGD+IELH+KR G RLDH+E+ RKK AR HKRS IAQK G+K K++ KKRY+EKA M+KT+AMH+E + ++ DD+V+EGAVPAYLLDRE +RAKVLSN +KQK+K+ Sbjct: 1 MPQGDHIELHQKRFGRRLDHYEKVRKKTARAAHKRSAIAQKVTGLKAKLYNKKRYSEKAEMKKTIAMHQERTNKKASDDKVKEGAVPAYLLDREGVSRAKVLSNMVKQKRKE 112
BLAST of CF833045 vs. ExPASy Swiss-Prot
Match: NSA2_HUMAN (Ribosome biogenesis protein NSA2 homolog OS=Homo sapiens GN=TINP1 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.274e-34 Identity = 68/112 (60.71%), Postives = 92/112 (82.14%), Query Frame = 1 Query: 22 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRS*IAQKALGIKGKMFAKKRYAEKALMRKTLAMHEESSRRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKKKK 357 MPQ +YIELHRKR GYRLD+ E+KRKKE+RE H+RS A+K +G+K K++ K+R+AEK M+KT+ MHE+ + ++K D++ +GAVPAYLLDRE +RAKVLSN IKQK+K+ Sbjct: 1 MPQNEYIELHRKRYGYRLDYHEKKRKKESREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKE 112
BLAST of CF833045 vs. ExPASy Swiss-Prot
Match: NSA2_RAT (Ribosome biogenesis protein NSA2 homolog OS=Rattus norvegicus GN=Tinp1 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 1.664e-34 Identity = 68/112 (60.71%), Postives = 91/112 (81.25%), Query Frame = 1 Query: 22 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRS*IAQKALGIKGKMFAKKRYAEKALMRKTLAMHEESSRRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKKKK 357 MPQ +YIELHRKR GYRLD+ E+KRKKE RE H+RS A+K +G+K K++ K+R+AEK M+KT+ MHE+ + ++K D++ +GAVPAYLLDRE +RAKVLSN IKQK+K+ Sbjct: 1 MPQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKDDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKE 112
BLAST of CF833045 vs. ExPASy Swiss-Prot
Match: NSA2_MOUSE (Ribosome biogenesis protein NSA2 homolog OS=Mus musculus GN=Tinp1 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.664e-34 Identity = 68/112 (60.71%), Postives = 91/112 (81.25%), Query Frame = 1 Query: 22 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRS*IAQKALGIKGKMFAKKRYAEKALMRKTLAMHEESSRRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKKKK 357 MPQ +YIELHRKR GYRLD+ E+KRKKE RE H+RS A+K +G+K K++ K+R+AEK M+KT+ MHE+ + ++K D++ +GAVPAYLLDRE +RAKVLSN IKQK+K+ Sbjct: 1 MPQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKDDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKE 112
BLAST of CF833045 vs. ExPASy Swiss-Prot
Match: NSA2_BOVIN (Ribosome biogenesis protein NSA2 homolog OS=Bos taurus GN=TINP1 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.664e-34 Identity = 68/112 (60.71%), Postives = 91/112 (81.25%), Query Frame = 1 Query: 22 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRS*IAQKALGIKGKMFAKKRYAEKALMRKTLAMHEESSRRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKKKK 357 MPQ +YIELHRKR GYRLD+ E+KRKKE RE H+RS A+K +G+K K++ K+R+AEK M+KT+ MHE+ + ++K D++ +GAVPAYLLDRE +RAKVLSN IKQK+K+ Sbjct: 1 MPQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKE 112
BLAST of CF833045 vs. ExPASy Swiss-Prot
Match: NSA2_CANGA (Ribosome biogenesis protein NSA2 OS=Candida glabrata GN=NSA2 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.573e-27 Identity = 64/111 (57.66%), Postives = 77/111 (69.37%), Query Frame = 1 Query: 22 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRS*IAQKALGIKGKMFAKKRYAEKALMRKTLAMHEESSRRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTIKQKK 351 MPQ DYIE H K++G RLD+ ERKRK+EAREVHK + AQK G KGK FAKKRYAEK MRK + HE+S + G A+P YLLDRE T AK +S++IKQK+ Sbjct: 1 MPQNDYIERHIKQHGRRLDYEERKRKREAREVHKVAEKAQKLTGWKGKQFAKKRYAEKVAMRKKIKAHEQSKAKGSSKPLADNGEALPTYLLDREQTNTAKAISSSIKQKR 111
BLAST of CF833045 vs. ExPASy Swiss-Prot
Match: NSA2_ASHGO (Ribosome biogenesis protein NSA2 OS=Ashbya gossypii GN=NSA2 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.361e-27 Identity = 64/111 (57.66%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 22 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRS*IAQKALGIKGKMFAKKRYAEKALMRKTLAMHEESSRRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTIKQKK 351 MPQ +YIE H K++G RLDH ERKRK+EARE HK S AQK G KGK FAKKRYAEK MRK + HE+S + G A+PAYLLDRE AK +S++IKQK+ Sbjct: 1 MPQNEYIEQHIKKHGRRLDHEERKRKREAREAHKISEKAQKLTGWKGKQFAKKRYAEKVAMRKKIKAHEQSKLKGAAKPLEDSGEALPAYLLDREQANSAKAISSSIKQKR 111
BLAST of CF833045 vs. ExPASy Swiss-Prot
Match: NSA2_YEAST (Ribosome biogenesis protein NSA2 OS=Saccharomyces cerevisiae GN=NSA2 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.668e-26 Identity = 64/111 (57.66%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 22 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRS*IAQKALGIKGKMFAKKRYAEKALMRKTLAMHEESSRRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTIKQKK 351 MPQ DYIE H K++G RLDH ERKRK+EARE HK S AQK G KGK FAKKRYAEK MRK + HE+S + +G A+P YLLDRE AK +S++IKQK+ Sbjct: 1 MPQNDYIERHIKQHGKRLDHEERKRKREARESHKISERAQKLTGWKGKQFAKKRYAEKVSMRKKIKAHEQSKVKGSSKPLDTDGDALPTYLLDREQNNTAKAISSSIKQKR 111
BLAST of CF833045 vs. ExPASy Swiss-Prot
Match: NSA2_YEAS7 (Ribosome biogenesis protein NSA2 OS=Saccharomyces cerevisiae (strain YJM789) GN=NSA2 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.668e-26 Identity = 64/111 (57.66%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 22 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRS*IAQKALGIKGKMFAKKRYAEKALMRKTLAMHEESSRRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTIKQKK 351 MPQ DYIE H K++G RLDH ERKRK+EARE HK S AQK G KGK FAKKRYAEK MRK + HE+S + +G A+P YLLDRE AK +S++IKQK+ Sbjct: 1 MPQNDYIERHIKQHGKRLDHEERKRKREARESHKISERAQKLTGWKGKQFAKKRYAEKVSMRKKIKAHEQSKVKGSSKPLDTDGDALPTYLLDREQNNTAKAISSSIKQKR 111
BLAST of CF833045 vs. ExPASy Swiss-Prot
Match: NSA2_VANPO (Ribosome biogenesis protein NSA2 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=NSA2 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.668e-26 Identity = 65/112 (58.04%), Postives = 79/112 (70.54%), Query Frame = 1 Query: 22 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRS*IAQKALGIKGKMFAKKRYAEKALMRKTLAMHEESSRR--RKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKK 351 MPQ +YIE H K++G RLDH ERKRK+EARE HK S AQK G KGK FAKKRY+EK MRK + HE+S + K DE + A+P YLLDRE T AK +S++IKQK+ Sbjct: 1 MPQNEYIEQHIKQHGRRLDHEERKRKREAREAHKISERAQKLTGWKGKQFAKKRYSEKVAMRKKIKAHEQSKVKGGSKPLDESGD-ALPTYLLDREQTNTAKAISSSIKQKR 111 The following BLAST results are available for this feature:
BLAST of CF833045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833045 ID=CF833045; Name=CF833045; organism=Citrus sinensis; type=EST; length=359bpback to top |