CF833091

Overview
NameCF833091
Unique NameCF833091
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2005 contig Csv1_Contig2005:159..826. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF833091 vs. ExPASy Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.805e-45
Identity = 88/98 (89.80%), Postives = 93/98 (94.90%), Query Frame = -1
Query:  377 EKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHIP 670
            EKYPDRIPVIVEKAE+SDIP IDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPP GA+MS++YEEKKD+DGFLYVTYSGENTFG   P
Sbjct:   24 EKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGFGSP 121          
BLAST of CF833091 vs. ExPASy Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.070e-44
Identity = 84/95 (88.42%), Postives = 94/95 (98.95%), Query Frame = -1
Query:  386 EKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 670
            EKYPDRIPVIVEKAE+S++PNIDKKKYLVP+DLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTG +MS++YE+KKDEDGFLY+TYSGENTFG+
Sbjct:   25 EKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFGA 119          
BLAST of CF833091 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.062e-44
Identity = 86/94 (91.49%), Postives = 90/94 (95.74%), Query Frame = -1
Query:  389 EKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 670
            EKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFVYV+RKRIKLSAEKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct:   24 EKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of CF833091 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 9.062e-44
Identity = 86/94 (91.49%), Postives = 90/94 (95.74%), Query Frame = -1
Query:  389 EKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 670
            EKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFVYV+RKRIKLSAEKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct:   24 EKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of CF833091 vs. ExPASy Swiss-Prot
Match: ATG8G_ARATH (Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.183e-43
Identity = 85/95 (89.47%), Postives = 92/95 (96.84%), Query Frame = -1
Query:  386 EKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 670
            EKY DR+PVIVEK+E+SDIPNIDKKKYLVPADLTVGQFVYVIRKRI+LSAEKAIFIFVDNVLPPTGA+MS IY+E K+EDGFLYVTYSGENTFGS
Sbjct:   24 EKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFGS 118          
BLAST of CF833091 vs. ExPASy Swiss-Prot
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana GN=ATG8C PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.637e-43
Identity = 83/94 (88.30%), Postives = 90/94 (95.74%), Query Frame = -1
Query:  389 EKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 670
            EKYPDRIPVIVE+AERSD+PNIDKKKYLVPADLTVGQFVYV+RKRIKLSAEKAIF+FV N LPPT A+MSAIY+E KDEDGFLY+TYSGENTFG
Sbjct:   24 EKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117          
BLAST of CF833091 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 2.915e-42
Identity = 84/94 (89.36%), Postives = 88/94 (93.62%), Query Frame = -1
Query:  389 EKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 670
            EKY DRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct:   24 EKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of CF833091 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.915e-42
Identity = 84/94 (89.36%), Postives = 88/94 (93.62%), Query Frame = -1
Query:  389 EKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 670
            EKY DRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct:   24 EKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of CF833091 vs. ExPASy Swiss-Prot
Match: ATG8A_ARATH (Autophagy-related protein 8a OS=Arabidopsis thaliana GN=ATG8A PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 3.807e-42
Identity = 82/95 (86.32%), Postives = 89/95 (93.68%), Query Frame = -1
Query:  386 EKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 670
            EKYPDRIPVIVEKA +SD+P+IDKKKYLVPADLTVGQFVYV+RKRIKL AEKAIF+FV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFGS
Sbjct:   24 EKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 118          
BLAST of CF833091 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.972e-42
Identity = 81/94 (86.17%), Postives = 90/94 (95.74%), Query Frame = -1
Query:  389 EKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 670
            EKYPDRIPVIVE+AE+SD+P+ID+KKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV N+LPPT AIMSAIYEE KDEDGFLY++YSGENTFG
Sbjct:   24 EKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117          
The following BLAST results are available for this feature:
BLAST of CF833091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8F_ARATH4.805e-4589.80Autophagy-related protein 8f OS=Arabidopsis thalia... [more]
ATG8E_ARATH1.070e-4488.42Autophagy-related protein 8e OS=Arabidopsis thalia... [more]
ATG8C_ORYSJ9.062e-4491.49Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8C_ORYSI9.062e-4491.49Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8G_ARATH1.183e-4389.47Autophagy-related protein 8g OS=Arabidopsis thalia... [more]
ATG8C_ARATH2.637e-4388.30Autophagy-related protein 8c OS=Arabidopsis thalia... [more]
ATG8B_ORYSJ2.915e-4289.36Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8B_ORYSI2.915e-4289.36Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8A_ARATH3.807e-4286.32Autophagy-related protein 8a OS=Arabidopsis thalia... [more]
ATG8D_ARATH4.972e-4286.17Autophagy-related protein 8d OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03A06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833091 ID=CF833091; Name=CF833091; organism=Citrus sinensis; type=EST; length=670bp
TTTTTTTTTTTTTTTTTACTTCTAATAAGTTGGTCAAATTTACATCTTAA
AAATAGCAATGGCTCACAAACACGCCGAATCCGGGTTCCAAGTCAAGTAT
TTCGTGATAAAGATTACAGATTGAAACCAGCAGCAAATACCCAAACCGAA
AAAAAATCATCAAAATAGAAAGGCAAGAAAGAAACTTGACATATTATGCC
TTTAAGACTTATATACAATAGGTAACTGTACATATTATCACTGGCAATGT
CTTTATAAAATATAAAATATGCCCGATAAAGGAATATTCAGCGGAAAGCA
AGGATGACAATTGAGATAAAAATGCGGTCGCACAAGAAACCACACAATGA
GCAGATAGATAATCACAAGGCTAAACTGGGATGTGGCTTCCAAATGTGTT
CTCCCCACTGTAAGTCACATAAAGAAAACCATCTTCATCCTTTTTCTCTT
CGTATATGGCAGACATAATTGCACCTGTAGGTGGGAGCACATTATCCACA
AAAATAAATATCGCCTTTTCAGCACTCAGTTTGATCCTTTTACGGATGAC
ATAGACAAATTGTCCTACAGTCAGGTCAGCTGGAACAAGATACTTCTTCT
TATCTATATTTGGGATGTCACTTCTCTCTGCCTTCTCCACAATCACCGGA
ATCCTGTCAGGGTACTTCTC
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