CF833099

Overview
NameCF833099
Unique NameCF833099
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10290 contig Csv1_Contig10290:389..1150. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF833099 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.796e-12
Identity = 51/189 (26.98%), Postives = 92/189 (48.68%), Query Frame = -1
Query:  215 SEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVLLPNDN-SIIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNGSCDTLCKDVGVSNVDGVQRLVVVDDND 760
            + P+LD  G+++ +  +YY++S++ G   GGG++  +     CP  V+Q       G  ++    D+   +VR ST++ ++F  +   + C+  ++W++DN + S GK ++T    K      T  + FK+EK                 YK   C + V  SC TLC D+G  + D  Q  + + DN+
Sbjct:   28 NSPVLDTDGDELQTGVQYYVLSSISGA-GGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD-RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGV------------LGYKFRFCPS-VCDSCTTLCSDIGRHSDDDGQIRLALSDNE 201          
BLAST of CF833099 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.977e-11
Identity = 58/188 (30.85%), Postives = 90/188 (47.87%), Query Frame = -1
Query:  224 PILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGK-NGQ--CPTDVIQLSPKDKRGKNLVLLP-NDNSIIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNGSCDTLCKDVGV-SNVDGVQRLVVVD 754
            P+LD+ G ++ +   YY+V  L     GGG++      NG   CP  V+Q   +    + L   P N    +VR ST++ + FS     +  +  ++W++D  + S G+ F+TIG  K      T  + FK+E+   S F           YK+V C T V GSC   C DVG+  +  G +RL + D
Sbjct:   35 PVLDIDGEKLRTGTNYYIVPVLRD--HGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSS-TVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGF-----------YKLVFCPT-VCGSCKVKCGDVGIYIDQKGRRRLALSD 207          
The following BLAST results are available for this feature:
BLAST of CF833099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC6.796e-1226.9821 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU1.977e-1130.85Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_03A10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833099 ID=CF833099; Name=CF833099; organism=Citrus sinensis; type=EST; length=763bp
TTTTTTTACCATCCATTAGGGTAGAGATTAATTAACAGCGAAAGCATCAT
AGGGCTGTTTTATTTATGCTTAACCATACAGATTAAAGAGTACTAGCCTG
GTCCATTATTTAGAATAATACAGCCTGCTGGCTTATTCATTACAGAGACG
GAAATAACATAGATCTTCCACTATCAGCTGGAAATAACACAACAGGCAAA
GGCAGATTTGGCTGATCATTATCATCAACCACAACTAGACGTTGGACGCC
ATCCACATTAGAAACGCCAACGTCTTTGCAGAGTGTATCACAAGAACCAT
TAACAGGTGTTGAACAATGAACAATTTTGTATAGACAGGGAATGTCTAGT
GCTATTTTCATATCAAATATTGATGCACTAACTTTCTCAAGTTTAAACAA
ATTTTGACACGTTTTACCTTCACCGATTGTTATAAACTGCTTTCCTAATG
AAGCGTTATCGTTGTCAACTTTCCACAACGAATCTTTGTTACACTGCTGA
AGAGAAGAAACTCTTGAGAATTTCAATTTAATATTAGTGGACTCCCGGAC
AATTATGGAATTGTCATTCGGAAGTAAAACTAAATTCTTTCCCCTTTTGT
CCTTAGGACTTAATTGGATAACATCCGTTGGACACTGTCCATTTTTGCCT
TTGTCCGCGCTAATTCCACCGCCGGTTTTAACTCCCCAGAGTGCTGAGAC
AAGATAATACCTGTGGCTGGAGTCCACCTGGTTGCCATAGACATCTAAGA
TAGGTTCAGATTC
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