CF833103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833103 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.080e-14 Identity = 44/106 (41.51%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 16 MDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 330 MDDIA +KF +R + SA+ECY Q+GV+ +SWKD+NEE L PT +P P+L R L AR +Y +G D YTH K + LL +P+ I Sbjct: 451 MDDIAEHKFNHRREDDCSAIECYMKQYGVTAQEAYNEFNKHIESSWKDVNEEFLKPTEMPTPVLCRSLNLARVMDVLYREG-DGYTHVGKAAKGGITSLLIDPIQI 555
BLAST of CF833103 vs. ExPASy Swiss-Prot
Match: HUMS_ARATH (Alpha-humulene/(-)-(E)-beta-caryophyllene synthase OS=Arabidopsis thaliana GN=TPS21 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 3.003e-13 Identity = 38/109 (34.86%), Postives = 56/109 (51.38%), Query Frame = 1 Query: 4 IGTLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTHSLMMKRQVALLLTEPLAI 330 I DDI+ Y+FE KR H + ++CY Q GVS ++WKD+N+EL+ P P P+L R+L +R Y D YT+ ++K + LL E + I Sbjct: 440 ISRFTDDISSYEFEHKREHVATGIDCYMQQFGVSKERAVEVMGNIVSDAWKDLNQELMRPHVFPFPLLMRVLNLSRVIDVFY-RYQDAYTNPKLLKEHIVSLLIETIPI 547
BLAST of CF833103 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.141e-12 Identity = 39/106 (36.79%), Postives = 60/106 (56.60%), Query Frame = 1 Query: 16 MDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 330 MDD+A +KF+ +R + SA+ECY ++GV+ ++WKD+N+E L PT +P +L R L AR +Y +G D YT+ K + LL EP+A+ Sbjct: 450 MDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDLNQEFLKPTEMPTEVLNRSLNLARVMDVLYREG-DGYTYVGKAAKGGITSLLIEPIAL 554
BLAST of CF833103 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.491e-12 Identity = 39/106 (36.79%), Postives = 60/106 (56.60%), Query Frame = 1 Query: 16 MDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 330 MDD+A +KF+ +R + SA+ECY ++GV+ ++WKD+N+E L PT +P +L R L AR +Y +G D YT+ K + LL EP+A+ Sbjct: 450 MDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDVNKEFLKPTEMPTEVLNRSLNLARVMDVLYREG-DGYTYVGKAAKGGITSLLIEPVAL 554
BLAST of CF833103 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.947e-12 Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 16 MDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 330 MDD+A +KF+ +R + SA+ECY ++GVS ++WKD+N+E PT +P +L R L AR +Y +G D YT+ K + LL EP+A+ Sbjct: 450 MDDVAEHKFKHRREDDCSAIECYMEEYGVSAQEAYDVFNKHVESAWKDVNQEFQKPTEMPTEVLNRSLNLARVMDVLYREG-DGYTYVGKAAKGGITSLLIEPIAL 554
BLAST of CF833103 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 9.661e-12 Identity = 38/106 (35.85%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 13 LMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTHSLMMKRQVALLLTEPLAI 330 L++D+ + EQ+RGH S ++CY NQHGVS + WK+INEE + + V + L R++ AR Y G D YT S +K+ V L +P++I Sbjct: 497 LVNDLTSHVTEQQRGHVASCIDCYMNQHGVSKDEAVKILQKMATDCWKEINEECMRQSQVSVGHLMRIVNLARLTDVSYKYG-DGYTDSQQLKQFVKGLFVDPISI 601
BLAST of CF833103 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.648e-11 Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 16 MDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 330 MDD+ +KF+ +R + SA+ECY ++GV+ ++WKD+N+ L PT +P +L R L AR +Y +G D YT+ K + LL EP+A+ Sbjct: 450 MDDVTEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDVNQGFLKPTEMPTEVLNRSLNLARVMDVLYREG-DGYTYVGKAAKGGITSLLIEPIAL 554 The following BLAST results are available for this feature:
BLAST of CF833103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF833103 ID=CF833103; Name=CF833103; organism=Citrus sinensis; type=EST; length=530bpback to top |