CF833108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833108 vs. ExPASy Swiss-Prot
Match: GAE1_ARATH (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1) HSP 1 Score: 348.977 bits (894), Expect = 1.520e-95 Identity = 169/197 (85.79%), Postives = 186/197 (94.42%), Query Frame = 3 Query: 129 MPSLEDELFPSTPGKFKIERSNTMNRQFHRCFTSTSTMFLWALFLVALTASYLSFQSFVDSGSRYFSASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLV 719 MPS+EDELFPSTPGKFKI+RSN RQ HRCF STSTMFLWALFL+ALTASYLSFQSFVDSGSRY +ASWGGIQWEK VR+SAQIHRSGG+SVLVTGA GFVG+HVSLAL+KRGDGVVGLDNFNNYYDPSLK+AR++LL++ GIFV+EGD+NDAKLLAKLFD VAFTHVMHLAAQAGVRYA++NP SYVHSNIAGLV Sbjct: 1 MPSIEDELFPSTPGKFKIDRSN---RQLHRCFASTSTMFLWALFLIALTASYLSFQSFVDSGSRYLTASWGGIQWEKQVRTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLV 194
BLAST of CF833108 vs. ExPASy Swiss-Prot
Match: GAE5_ARATH (UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.065e-56 Identity = 118/205 (57.56%), Postives = 142/205 (69.27%), Query Frame = 3 Query: 129 MPSLEDELFPSTPGKFKIERSNTMNRQFHRCFTSTSTMFLWALFLVALTASYL--------SFQSFVDSGSRYFSASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLV 719 M L+D PSTPGK+K ++ H + S + LWA +AL YL S ++ DS S +A +GG WEK VR SA+ GG++VLVTGA+GFVGTHVS+AL++RGDGV+GLDNFN YYDP LK+AR+ LL G+FV+EGDINDA LL KLFD V FTHVMHLAAQAGVRYAMQNP SYV+SNIAG V Sbjct: 1 MSHLDD--LPSTPGKYKTDKVPPYGILHHHRYLRLSKLTLWASLFLALFLFYLVLSPPPSPSRRNLNDSSS-ISAAKYGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFV 202
BLAST of CF833108 vs. ExPASy Swiss-Prot
Match: GAE3_ARATH (UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.372e-56 Identity = 123/205 (60.00%), Postives = 142/205 (69.27%), Query Frame = 3 Query: 129 MPSLEDELFPSTPGKFKIERSNTMNRQFHRCF--TSTSTMFLWALFLVALTASYLSFQSFVDSGSRYFSA------SWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLV 719 M L+D PSTPGKFK FHR +S + + W+L V L + ++S V S S SWGG WEK VRSSA++ G SVLVTGAAGFVGTHVS ALK+RGDGV+GLDNFN+YYDPSLK+AR+ALL G+FV+EGDINDA LL KLF+ V FTHVMHLAAQAGVRYAM+NP SYVHSNIAG V Sbjct: 4 MSHLDD--IPSTPGKFK--------PYFHRTRWQSSVAKLAFWSLVFVGLIFIFF-YRSPVSSNPADPSRRSLRTYSWGGPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFV 197
BLAST of CF833108 vs. ExPASy Swiss-Prot
Match: GAE2_ARATH (UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 6.901e-56 Identity = 118/200 (59.00%), Postives = 139/200 (69.50%), Query Frame = 3 Query: 129 MPSLEDELFPSTPGKFKIERSNTMNRQFHRCFTSTSTMFLWALFLVALTAS--YLSFQSFVDSGSRYFSA-SWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLV 719 M L+D PSTPGKFK+ + R +S + + W+L L Y S S DS R SWGG WEK VRSSA++ G+SVLVTGAAGFVGTHVS ALK+RGDGV+GLDNFN+YYD SLK++R+ALL G+F++EGDIND LL KLF+ V FTHVMHLAAQAGVRYAM+NP SYVHSNIAG V Sbjct: 1 MSHLDD--IPSTPGKFKMMDKSPFFLHRTRWQSSVAKLAFWSLVFFGLLFIFFYRSPISNPDSSRRSLRTYSWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFV 198
BLAST of CF833108 vs. ExPASy Swiss-Prot
Match: GAE4_ARATH (UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.425e-55 Identity = 118/205 (57.56%), Postives = 149/205 (72.68%), Query Frame = 3 Query: 129 MPSLEDELFPSTPGKFKIERSNTMNR-QFHRCFTSTSTMFLWALFLVAL----TASYLSFQSFVDSGSRYFSAS-WGGIQWEKHVRSSAQIHRS--GGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLV 719 M L+D PS+PGKFK+E+S+ ++R +F T + + L L++L + ++ S D R + +GG WEK +RSSA+I S G++VLVTGAAGFVGTHVS ALK+RGDGV+GLDNFN+YYDPSLK+AR+ALL GIF++EGDIND +LL KLF V+FTHVMHLAAQAGVRYAM+NP SYVHSNIAG V Sbjct: 1 MSRLDD--IPSSPGKFKMEKSSYLHRLRFQSSLTKFAFFSFFLLCLISLLFLRSPPSINPSSPSDPSRRSLRTNTYGGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFV 203
BLAST of CF833108 vs. ExPASy Swiss-Prot
Match: GAE6_ARATH (UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.646e-49 Identity = 107/205 (52.20%), Postives = 135/205 (65.85%), Query Frame = 3 Query: 177 KIERSNTMNRQFH--RCFTSTSTMFLWALFLVALT-------------------ASYLSFQSFVDSG---SRYFSASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLV 719 K+ER N+ R+ H + ++S + A LVAL A +L +SF+ +G S S+S GG WEK VR S+ R G+SVLVTGAAGFVG+H SLAL+KRGDGV+G DNFN+YYDPSLK+AR+ LL +F++EGD+ND LL KLFD V FTH++HLAAQAGVRYAM+NP SY+ SNIAG V Sbjct: 14 KLERYNSYLRKIHSTKVLNASSKVLFRATLLVALVLVLIFAINYPPLSDSRAAAAHHLHRRSFLSTGLFSSSSSSSSIGGAAWEKRVRQSSTAKRPHGLSVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEGDLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFV 218
BLAST of CF833108 vs. ExPASy Swiss-Prot
Match: YCL2_ECO11 (Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia coli O111:H- PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18 Identity = 48/107 (44.86%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 399 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLV 719 M LVTGAAGF+G HVS L + G VVG+DN N+YYD SLK+AR LL G + D+ D + + LF + F V + VRY+++NPH+Y SN+ G + Sbjct: 1 MKYLVTGAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPGFQFHKIDLADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFL 107
BLAST of CF833108 vs. ExPASy Swiss-Prot
Match: CAPI_STAAU (Protein capI OS=Staphylococcus aureus GN=capI PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16 Identity = 42/107 (39.25%), Postives = 68/107 (63.55%), Query Frame = 3 Query: 399 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLV 719 M +L+TG AGF+G+H++ L K+G V+G+D+ N+YY SLK+ R + + + + L+K+F V++LAAQAGVRY+++NP +Y+ SNI G + Sbjct: 1 MKILITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVKLENYDDLSKVFVDEQPEVVVNLAAQAGVRYSIENPRTYIDSNIVGFM 107
BLAST of CF833108 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.191e-15 Identity = 45/107 (42.06%), Postives = 67/107 (62.62%), Query Frame = 3 Query: 402 SVLVTGAAGFVGTHVSLALKKRGDG--VVGLDNFNNYYDPSLKKARKALLNNHGIFV-IEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAG 713 ++LVTG+AGF+G H+S L + V+G+DN NNYY+P LK+ R +L N+ + I+ D +D L + ++HL AQAGVRY++QNP +Y+ SN G Sbjct: 5 NILVTGSAGFIGFHLSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEILKNYENYTFIKLDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMG 111
BLAST of CF833108 vs. ExPASy Swiss-Prot
Match: LPSL_RHIME (UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti GN=lspL PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.555e-15 Identity = 43/106 (40.57%), Postives = 63/106 (59.43%), Query Frame = 3 Query: 399 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALL-NNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAG 713 M L+TG AGF+G HV+ L G VVG D YYD +LK+ R A+L ++G + + D L + + ++HLAAQAGVRY+++NP +YV +N+ G Sbjct: 1 MRYLITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVTAMLEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVG 106 The following BLAST results are available for this feature:
BLAST of CF833108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833108 ID=CF833108; Name=CF833108; organism=Citrus sinensis; type=EST; length=722bpback to top |