CF833109

Overview
NameCF833109
Unique NameCF833109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length491
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1296 contig Csv1_Contig1296:1095..1585. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF833109 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.726e-19
Identity = 42/84 (50.00%), Postives = 57/84 (67.86%), Query Frame = -3 
Query:  241 CNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCHNVGR-SFEDGVRRLVL 489
            C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSVC+SC  LC ++GR S +DG  RL L
Sbjct:  116 CSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG--YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197
[Close]
BLAST of CF833109 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 2.645e-15
Identity = 36/86 (41.86%), Postives = 56/86 (65.12%), Query Frame = -3 
Query:  217 LWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCHNVGRSFEDGVRRLVLVRDDEPAF 474
            +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+VC SC   C +VG   +   RR + + D   AF
Sbjct:  128 VWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSDKPFAF 212
The following BLAST results are available for this feature:
BLAST of CF833109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC6.726e-1950.0021 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU2.645e-1541.86Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_03A16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03A16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833109 ID=CF833109; Name=CF833109; organism=Citrus sinensis; type=EST; length=491bp
TTTTTTTTTTTTTTTTTCGATTTTCATAAGGTATACACCAACAGTAGAAT
CTTTTAACCCCGAAAGGATCACAGGGTACTTATTCATAATTCCCTTCCTA
GAGATTAAAGAGCAGCTAGCCTGGTCCGTTATTTAGAATAATAATACCGC
TAGCTGGTTAGGGTACATTGATTACACAGACGTTGATCTTTCTGTAGCGG
GAATTAACACAACAGGAAATGCCGGCTCATCATCACGAACCAGAACCAGA
CGTCGAACGCCATCCTCAAACGAACGGCCAACGTTGTGGCAGAGTTTGAC
ACAAGACTCGCAAACGGATGGACAATGAACGATTTTGTATATACCTGGAA
AATTTCCAATTTTCTCAAGCTTAAACCAATTTAGCAAAGTTTCAGCTCCA
GGGTGACCATCAAGTCCCCCGGTTGTTATAAACCATTTGCCTGATGCCGC
GTCATAATTATCAACTTTCCACAACGGTTGTTCGTTACAAT
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