CF833130

Overview
NameCF833130
Unique NameCF833130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10123 contig Csv1_Contig10123:875..1565. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: ALA2_PANMI (Alanine aminotransferase 2 OS=Panicum miliaceum PE=1 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 1.048e-98
Identity = 177/230 (76.96%), Postives = 199/230 (86.52%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFY 691
            E TGWGLE S++KKQLE A++KGI VRALVVINPGNPTGQVLAE+NQ  IV FCK EGLVLLADEVYQEN+YV +KKF+SFKK++RS+GYGE D+ LVSFQSVSKGY+GECGKRGGYME+TGFS  VREQIYK+ASVNLCSNI+GQILASLVM+PPKVGDESY +Y AE+DGIL SLARRAK LEDAFN+LEGI+CNKAEGAMYLFP+I LP             PDAFY
Sbjct:  195 EKTGWGLEISDLKKQLEDARSKGIDVRALVVINPGNPTGQVLAEDNQCDIVRFCKNEGLVLLADEVYQENIYVDDKKFNSFKKIARSVGYGEDDLPLVSFQSVSKGYYGECGKRGGYMEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKVGDESYAAYKAEKDGILQSLARRAKALEDAFNNLEGISCNKAEGAMYLFPQIHLPKKAIEAAKAANKAPDAFY 424          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: ALA2_HORVU (Alanine aminotransferase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 1.159e-97
Identity = 175/230 (76.09%), Postives = 196/230 (85.22%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFY 691
            E+TGWGLETS+VKKQLE A+++GI VRALVVINPGNPTGQVLAEENQ  IV FCK EGLVLLADEVYQEN+YV  KKFHSFKK+ RS+GYGE+D+ LVS+QSVSKGY+GECGKRGGY E+TGFS  VREQIYK+ASVNLCSNI+GQILASLVM+PPK  DESY SY AE+DGIL+SLARRAK LE AFN LEGITCN+AEGAMY+FP+I LP             PDAFY
Sbjct:  195 ESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFY 424          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: ALAM_DICDI (Probable alanine aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=gpt PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.446e-65
Identity = 122/231 (52.81%), Postives = 158/231 (68.40%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK-FHSFKKVSRSMGYGEKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFY 691
            E  GW LE S+++     A +KGI  RALV+INPGNPTGQ L   N   IV FC ++ +VLLADEVYQENVYV E K F SFKKV + MG    D+ +VSF SVSKG+ GECGKRGGYME+ G + +V+ +IYK+AS+ LC N+ GQ++  L++ PP  G++S++ Y  ERD I  SL +RA  L +A N+LEG+TCN +EGAMY FP+I+LP             PDA+Y
Sbjct:  247 EEKGWSLEISQLEHSYNDAVSKGINPRALVIINPGNPTGQCLDRANMEEIVKFCLEKNVVLLADEVYQENVYVKESKPFISFKKVVKDMGGDYADLEMVSFHSVSKGFVGECGKRGGYMELNGVTQDVKAEIYKLASIGLCPNVIGQLVVDLMVRPPVAGEQSHDLYLKERDNIYESLKKRANLLTNALNNLEGVTCNPSEGAMYAFPQIRLPAKAVEYANSIGKAPDAYY 477          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: ALAT2_MOUSE (Alanine aminotransferase 2 OS=Mus musculus GN=Gpt2 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.612e-54
Identity = 106/231 (45.89%), Postives = 143/231 (61.90%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG-EKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFY 691
            E   W L   E+++ L  AK      + L +INPGNPTGQV + +    ++ F  +E L LLADEVYQ+NVY P+ +FHSFKKV   MG+    ++ L SF S SKGY GECG RGGYMEV    PE++ Q+ K+ SV LC  +SGQ    +V++PP+ G+ES+E +  E++ +L +LA++AK  ED FN + GI CN  +GAMY FPRI +P             PD FY
Sbjct:  236 EENCWALNVDELRRALRQAKDH-CDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYQMGHEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPEPGEESFEQFSREKEFVLGNLAKKAKLTEDLFNQVPGIQCNPLQGAMYAFPRILIPAKAVEAAQSHKMAPDMFY 465          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: ALAT2_HUMAN (Alanine aminotransferase 2 OS=Homo sapiens GN=GPT2 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.752e-53
Identity = 105/231 (45.45%), Postives = 143/231 (61.90%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG-EKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFY 691
            E   W L  +E+++ ++ AK      + L +INPGNPTGQV + +    ++ F  +E L LLADEVYQ+NVY P+ +FHSFKKV   MG     ++ L SF S SKGY GECG RGGYMEV    PE++ Q+ K+ SV LC  +SGQ    +V++PP  G+ES+E +  E++ +L +LA++AK  ED FN + GI CN  +GAMY FPRI +P             PD FY
Sbjct:  237 EENCWALNVNELRRAVQEAKDH-CDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFY 466          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: ALAM_YEAST (Probable alanine aminotransferase, mitochondrial OS=Saccharomyces cerevisiae GN=ALT1 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.904e-53
Identity = 113/234 (48.29%), Postives = 146/234 (62.39%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY---GEKD-ISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFY 691
            E +GW     E++  ++ A    I    LVVINPGNPTG VL+ E+   I +   K G V++ADEVYQEN++ P  KFHS KK+ R +     G+ D + L S  S SKG  GECG+RGGYME+TGFS E+R+ I K+AS++LC  ++GQ L  L++ PP  G+ES+ES  AER+ I   L  RA TL + FNSLEGI C K +GAMYLFP+I LP             PD FY
Sbjct:  305 ENSGWSTNPEEIETVVKEAIQNEIKPTVLVVINPGNPTGAVLSPESIAQIFEVAAKYGTVVIADEVYQENIF-PGTKFHSMKKILRHLQREHPGKFDNVQLASLHSTSKGVSGECGQRGGYMELTGFSHEMRQVILKLASISLCPVVTGQALVDLMVRPPVEGEESFESDQAERNSIHEKLITRAMTLYETFNSLEGIECQKPQGAMYLFPKIDLPFKAVQEARHLELTPDEFY 537          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: ALAT2_DANRE (Alanine aminotransferase 2-like OS=Danio rerio GN=gpt2l PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 4.316e-52
Identity = 107/228 (46.93%), Postives = 142/228 (62.28%), Query Frame = 2
Query:   14 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG--YGEKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFY 691
            W L+ SE+++ L+AA+ K    R L +INPGNPTGQV + +    ++ F  KE L L+ADEVYQ+NVY    +FHSFKKV   MG  Y +K + L SF S SK Y GECG RGGYMEV     +V+ Q+ K+ SV LC    GQ L  LV++PP+ G+ S++++  ER  +LS+LA +AK  E   N++ GI+CN  +GAMY FPRI LP             PD FY
Sbjct:  267 WSLDISELQRSLQAAR-KHCNPRVLCIINPGNPTGQVQSRQCIEDVIQFAAKENLFLMADEVYQDNVYAKGCEFHSFKKVLFEMGPEYSKK-VELASFHSTSKCYMGECGFRGGYMEVINMDADVKAQLTKLVSVRLCPPAPGQALMDLVVNPPQPGEPSHQTFMQERTAVLSALAEKAKLTEQILNTVPGISCNPVQGAMYSFPRITLPERAISEAKAKGQAPDMFY 492          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: ALAT1_RAT (Alanine aminotransferase 1 OS=Rattus norvegicus GN=Gpt PE=1 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 1.640e-51
Identity = 108/232 (46.55%), Postives = 140/232 (60.34%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG--YGEKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFY 691
            E   W L+ +E+++ L  A+ +    R L VINPGNPTGQV   E   A++ F  KEGL L+ADEVYQ+NVY    +FHSFKKV   MG  Y  +   L SF SVSKGY GECG RGGY+EV     EV++Q+ K+ SV LC  + GQ L  +V+SPP   + S++ + AER  +L+ LA +AK  E  FN   GI CN  +GAMY FP++QLP             PD F+
Sbjct:  210 EERAWALDIAELRRALCQARDR-CCPRVLCVINPGNPTGQVQTRECIEAVIRFAFKEGLFLMADEVYQDNVYAEGSQFHSFKKVLMEMGPPYSTQQ-ELASFHSVSKGYMGECGFRGGYVEVVNMDAEVQKQMGKLMSVRLCPPVPGQALMDMVVSPPTPSEPSFKQFQAERQEVLAELAAKAKLTEQVFNEAPGIRCNPVQGAMYSFPQVQLPLKAVQRAQELGLAPDMFF 439          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: ALAT1_MOUSE (Alanine aminotransferase 1 OS=Mus musculus GN=Gpt PE=2 SV=3)

HSP 1 Score: 201.83 bits (512), Expect = 2.798e-51
Identity = 108/232 (46.55%), Postives = 140/232 (60.34%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG--YGEKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFY 691
            E   W L+ +E+++ L  A+ +    R L VINPGNPTGQV   E   A++ F  +EGL L+ADEVYQ+NVY    +FHSFKKV   MG  Y  +   L SF SVSKGY GECG RGGY+EV     EV++Q+ K+ SV LC  + GQ L  +V+SPP   + S++ + AER  +L+ LA +AK  E  FN   GI CN  +GAMY FP+IQLP             PD F+
Sbjct:  210 EERAWALDIAELRRALCQARDR-CCPRVLCVINPGNPTGQVQTRECIEAVIRFAFEEGLFLMADEVYQDNVYAEGSQFHSFKKVLTEMGPPYATQQ-ELASFHSVSKGYMGECGFRGGYVEVVNMDAEVQKQMAKLMSVRLCPPVPGQALMGMVVSPPTPSEPSFKQFQAERQEVLAELAAKAKLTEQVFNEAPGIRCNPVQGAMYSFPQIQLPLKAVQRAQDLGLAPDMFF 439          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: ALAT2_XENLA (Alanine aminotransferase 2 OS=Xenopus laevis GN=gpt2 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.063e-50
Identity = 101/232 (43.53%), Postives = 141/232 (60.78%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG--YGEKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFY 691
            E   W L+ +E+++ L  A+ K    + L +INPGNPTGQV + +    ++ F  +E L L+ADEVYQ+NVY     FHSFKKV   MG  Y E  + L SF S SKGY GECG RGGYMEV    P V++Q+ K+ SV LC  + GQ+L  ++++PPK G+ SY+ + +E+  +L++LA +A+  E+  N   GI CN  +GAMY FPRI +P             PD F+
Sbjct:  254 EENCWALDINELRRALAEAR-KHCDPKVLCIINPGNPTGQVQSRKCIEDVIRFAAEENLFLMADEVYQDNVYAKGCAFHSFKKVLFEMGPKYSET-LELASFHSTSKGYMGECGFRGGYMEVINMDPAVKQQLTKLVSVRLCPPVPGQVLLDVIVNPPKPGEPSYKQFISEKQAVLNNLAEKARLTEEILNQAPGIRCNPVQGAMYSFPRIHIPEKAIKLAQAEGQAPDMFF 483          
The following BLAST results are available for this feature:
BLAST of CF833130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
ALA2_PANMI1.048e-9876.96Alanine aminotransferase 2 OS=Panicum miliaceum PE... [more]
ALA2_HORVU1.159e-9776.09Alanine aminotransferase 2 OS=Hordeum vulgare PE=2... [more]
ALAM_DICDI4.446e-6552.81Probable alanine aminotransferase, mitochondrial O... [more]
ALAT2_MOUSE4.612e-5445.89Alanine aminotransferase 2 OS=Mus musculus GN=Gpt2... [more]
ALAT2_HUMAN1.752e-5345.45Alanine aminotransferase 2 OS=Homo sapiens GN=GPT2... [more]
ALAM_YEAST3.904e-5348.29Probable alanine aminotransferase, mitochondrial O... [more]
ALAT2_DANRE4.316e-5246.93Alanine aminotransferase 2-like OS=Danio rerio GN=... [more]
ALAT1_RAT1.640e-5146.55Alanine aminotransferase 1 OS=Rattus norvegicus GN... [more]
ALAT1_MOUSE2.798e-5146.55Alanine aminotransferase 1 OS=Mus musculus GN=Gpt ... [more]
ALAT2_XENLA1.063e-5043.53Alanine aminotransferase 2 OS=Xenopus laevis GN=gp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03B05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833130 ID=CF833130; Name=CF833130; organism=Citrus sinensis; type=EST; length=691bp
TGAAGCAACAGGATGGGGATTGGAAACTTCGGAGGTTAAGAAGCAATTGG
AGGCCGCCAAGGCCAAAGGTATTACCGTTAGGGCCTTGGTTGTAATAAAT
CCAGGCAATCCAACTGGACAGGTTCTTGCTGAAGAAAACCAGCGTGCAAT
TGTGGATTTCTGCAAAAAGGAGGGTCTTGTTCTTCTTGCAGATGAGGTAT
ACCAGGAAAATGTTTATGTGCCAGAGAAAAAATTCCATTCCTTTAAGAAG
GTATCCCGATCCATGGGGTATGGTGAGAAGGATATATCCCTTGTATCATT
TCAGTCAGTTTCTAAAGGTTACCATGGGGAGTGTGGAAAAAGAGGAGGTT
ACATGGAGGTCACTGGGTTCAGTCCTGAAGTAAGGGAGCAAATATACAAA
GTGGCATCTGTGAATCTTTGTTCTAATATCTCCGGCCAAATTCTGGCAAG
CCTCGTCATGAGTCCACCTAAGGTTGGAGATGAATCTTATGAGTCCTATT
GCGCTGAGAGGGATGGAATCCTCTCATCTTTAGCCAGGCGTGCAAAGACA
TTGGAAGATGCATTTAACAGTTTGGAAGGAATAACATGTAACAAGGCTGA
AGGAGCAATGTATCTCTTTCCTCGTATTCAACTGCCTGAAAAGGCAATTA
AAGCTGCTGAAGCTGAAAAAACTGTTCCAGATGCATTTTAT
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