CF833167

Overview
NameCF833167
Unique NameCF833167
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3485 contig Csv1_Contig3485:305..947. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: SCP17_ARATH (Serine carboxypeptidase-like 17 OS=Arabidopsis thaliana GN=SCPL17 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.493e-32
Identity = 66/130 (50.77%), Postives = 87/130 (66.92%), Query Frame = -1
Query:  254 ALRVREGTVEYWTRCNKSLSYTCDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 643
            AL V EGTV  W RCN  ++Y  D+ S V YH+ ++ +GY+ LV+SGD DM+VP++ T+AWI+SLN  I   W+PW+V++QVAGY   Y  K    +TFATVKG GH   EY+P E   MI RW +  PL
Sbjct:  313 ALLVNEGTVRKWIRCNTEIAYNKDIRSSVPYHKYISIEGYRSLVFSGDHDMLVPFLGTQAWIRSLNYSIVDDWRPWMVQNQVAGYTRTYANK----MTFATVKGGGHTS-EYKPVETYIMIKRWLSGQPL 437          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: SCP13_ARATH (Serine carboxypeptidase-like 13 OS=Arabidopsis thaliana GN=SCPL13 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.815e-31
Identity = 62/131 (47.33%), Postives = 89/131 (67.94%), Query Frame = -1
Query:  254 ALRVREGTVEYWTRCN-KSLSYTCDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 643
            AL+V +G++  W +CN K++SY  D+ S V YH K +  GY+ L+Y+GD DM+VP++AT+AWI+SLN  I   W+PW++  Q+AGY   Y  K    +TFAT+KG+GH   EY+PKE   M  RW ++ PL
Sbjct:  305 ALQVNKGSIGKWVQCNYKNISYNYDIKSSVAYHMKNSIDGYRSLIYNGDHDMMVPFLATQAWIRSLNYSITDDWKPWMINDQIAGYTRSYSNK----MTFATIKGSGHTA-EYKPKETSIMFKRWISAQPL 430          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: SCP52_ARATH (Putative serine carboxypeptidase-like 52 OS=Arabidopsis thaliana GN=SCPL52 PE=5 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.802e-31
Identity = 59/130 (45.38%), Postives = 85/130 (65.38%), Query Frame = -1
Query:  254 ALRVREGTVEYWTRCNKSLSYTCDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 643
            AL++R+G++  W RCN ++ Y  D+ S + YH   +  GY+ L+YSGD DM VP++ATEAWI+SLN PI   W+PW++ +Q+AGY   Y  K    +T+AT+K +GH   EY+P E   M  RW +  PL
Sbjct:   60 ALQIRKGSIGKWIRCNSNIHYDDDIISSIPYHMNNSINGYRSLIYSGDHDMEVPFLATEAWIRSLNYPIIDDWRPWIINNQIAGYTMTYANK----MTYATIKASGHTA-EYKPAESFIMFQRWISGQPL 184          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: SCP8_ARATH (Serine carboxypeptidase-like 8 OS=Arabidopsis thaliana GN=SCPL8 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.635e-29
Identity = 57/130 (43.85%), Postives = 81/130 (62.31%), Query Frame = -1
Query:  254 ALRVREGTVEYWTRCNKSLSYTCDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 643
            AL + +G+   W RCN+++ Y  D+ S + YH   +  GY+ L+YSGD D+ VP++AT+AWI+SLN      W+PW++ +Q+AGY   Y  K    +TFAT+KG GH   EYRP E   M  RW +  PL
Sbjct:  309 ALHIEKGSKGKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNK----MTFATIKGGGHTA-EYRPNETFIMFQRWISGQPL 433          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: SCP7_ARATH (Serine carboxypeptidase-like 7 OS=Arabidopsis thaliana GN=SCPL7 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.805e-28
Identity = 57/130 (43.85%), Postives = 78/130 (60.00%), Query Frame = -1
Query:  254 ALRVREGTVEYWTRCNKSLSYTCDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 643
            AL V +G++  W RC   + Y  D+ S V YH   +  GY  L++SGD DM VPY+ T+AWI+SLN  +   W+PW++  Q+AGY   Y  K    + FAT+KG GH  PEY+P+E   M  RW +  PL
Sbjct:  313 ALHVNKGSIGEWVRCYFEIPYNHDIKSSVPYHMNNSIDGYASLIFSGDHDMEVPYLGTQAWIRSLNYSLIDDWRPWMIGDQIAGYTRTYANK----MAFATIKGGGHT-PEYKPEESYIMFQRWISGQPL 437          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: SCP10_ARATH (Serine carboxypeptidase-like 10 OS=Arabidopsis thaliana GN=SCPL10 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.805e-28
Identity = 60/130 (46.15%), Postives = 78/130 (60.00%), Query Frame = -1
Query:  254 ALRVREGTVEYWTRCNKSLSYTCDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 643
            AL V +GT   W RCN ++ Y  ++ S V YH   +  GY+ L+YSGD D+ +P+ AT+AWIKSLN  I   W+PW++  Q+AGY   Y  K    +TFATVKG GH   EY P E   M  RW +  PL
Sbjct:  313 ALHVTKGTKGQWQRCNWTIPYDNNIISSVPYHMDNSINGYRSLIYSGDHDITMPFQATQAWIKSLNYSIVDDWRPWMINDQIAGYTRTYSNK----MTFATVKGGGHTA-EYLPNESSIMFQRWISGQPL 437          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: SCP18_ARATH (Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.491e-28
Identity = 63/130 (48.46%), Postives = 79/130 (60.77%), Query Frame = -1
Query:  254 LRVREGTVEYWTRCNKSLSYTCDVSSGVDYHRKLTKKG-YQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 640
            L V +G++  W RCN  L Y  D+ S V YHR  +  G Y+ LVYS D DM+VPY+ TEAWIKSLN  I   W+PW V +QV GY   Y      ++TFAT+KG GH   EY+P+E   M  RW +  PL
Sbjct:  340 LHVVKGSIGKWMRCNWDLPYEKDIKSSVPYHRNNSIIGDYRSLVYSSDHDMMVPYIGTEAWIKSLNYSITDDWRPWFVNNQVIGYTRTYAN----NMTFATIKGGGHTA-EYKPEESFMMFQRWISGRPL 464          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: SCP12_ARATH (Serine carboxypeptidase-like 12 OS=Arabidopsis thaliana GN=SCPL12 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.466e-27
Identity = 57/132 (43.18%), Postives = 82/132 (62.12%), Query Frame = -1
Query:  254 ALRVREGTVEYWTRCN--KSLSYTCDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 643
            AL V + ++  W RC     + Y  D+++ + YH   +  GY+ L+YSGD D+VVP++AT+AWIKSLN  I   W+PW+++ Q+AGY   Y  K    +TFATVKG+GH   EY+P E   M  RW + + L
Sbjct:  309 ALHVNKSSIGKWERCTYQNRIPYNKDINNSIPYHMNNSISGYRSLIYSGDHDLVVPFLATQAWIKSLNYSIIHEWRPWMIKDQIAGYTRTYSNK----MTFATVKGSGHTA-EYKPNETFIMFQRWISGHDL 435          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: SCP4_ARATH (Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.221e-27
Identity = 56/130 (43.08%), Postives = 79/130 (60.77%), Query Frame = -1
Query:  254 ALRVREGTVEYWTRCNKSLSYTCDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 643
            AL++ + ++  WTRC + + Y  D+ S V YH   +  GY+ L+YSGD D+ VP++ T+AWI+SLN  I   W+PW+++ Q+AGY   Y  K    +TFATV G GH   E+ PKE   M  RW    PL
Sbjct:  317 ALQINKESIGEWTRCYRGIPYNHDIKSSVPYHMNNSIDGYRSLIYSGDHDIQVPFLGTQAWIRSLNYSIIDDWRPWMIKDQIAGYTTSYVNK----MTFATVTGGGHTA-EFTPKETFMMFQRWINGQPL 441          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: SCP9_ARATH (Serine carboxypeptidase-like 9 OS=Arabidopsis thaliana GN=SCPL9 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.207e-27
Identity = 56/130 (43.08%), Postives = 80/130 (61.54%), Query Frame = -1
Query:  254 ALRVREGTVEYWTRCNKSLSYTCDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 643
            AL V +G++  W R ++ + Y  D+ S + YH   +  GY+ L++SGD D+ +P+ AT+AWIKSLN  I   W+PW+++ Q+AGY   Y  K    +TFATVKG GH   EY P+E   M  RW +  PL
Sbjct:  313 ALHVDKGSIGEWIRDHRGIPYKSDIRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNK----MTFATVKGGGHTA-EYLPEESSIMFQRWISGQPL 437          
The following BLAST results are available for this feature:
BLAST of CF833167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
SCP17_ARATH1.493e-3250.77Serine carboxypeptidase-like 17 OS=Arabidopsis tha... [more]
SCP13_ARATH2.815e-3147.33Serine carboxypeptidase-like 13 OS=Arabidopsis tha... [more]
SCP52_ARATH4.802e-3145.38Putative serine carboxypeptidase-like 52 OS=Arabid... [more]
SCP8_ARATH2.635e-2943.85Serine carboxypeptidase-like 8 OS=Arabidopsis thal... [more]
SCP7_ARATH3.805e-2843.85Serine carboxypeptidase-like 7 OS=Arabidopsis thal... [more]
SCP10_ARATH3.805e-2846.15Serine carboxypeptidase-like 10 OS=Arabidopsis tha... [more]
SCP18_ARATH6.491e-2848.46Serine carboxypeptidase-like 18 OS=Arabidopsis tha... [more]
SCP12_ARATH2.466e-2743.18Serine carboxypeptidase-like 12 OS=Arabidopsis tha... [more]
SCP4_ARATH3.221e-2743.08Serine carboxypeptidase-like 4 OS=Arabidopsis thal... [more]
SCP9_ARATH4.207e-2743.08Serine carboxypeptidase-like 9 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03C07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833167 ID=CF833167; Name=CF833167; organism=Citrus sinensis; type=EST; length=643bp
TTATTATTTCATAAGACAAATATGATTACCAAGCTTATGATGAAAAAAAA
CCGTACACAAATGAGTTTGGAGCGATGTTTTTAAAAAAGCAAATAGGAGC
ATCAAGGCTCTTGCAATACTAATTTTTCAGATCATAAGTTTGGTAAAGCC
AAACATAAATAATTTTATGGGTGTTTACAACGCCATCAGCCACTTAAGCT
CCACATTTATTTTTCAATCTCCAAAACTTAATAATTATATGAACGTGGCT
CTAAAGAGGATAGGATGCGAACCACCTGTCGATCATTGCAAGACATTCCT
TAGGCCTGTACTCTGGACCATTATGACCTGCTCCCTTTACTGTGGCAAAT
GTCAAATGATAATTGTTCTTTCCCTTGTAACGGTACCAATATCCTGCAAC
TTGACTTTCCACCAACCACGGCTGCCAACCAGTTTCAATCGGCAAATTTA
ATGACTTTATCCATGCTTCAGTAGCCATATATGGAACTACCATGTCGACA
TCTCCGCTGTAAACCAAAACTTGATAGCCTTTCTTGGTGAGCTTTCGGTG
ATAATCAACACCACTTGAGACATCACATGTGTAAGACAAACTTTTATTGC
ATCTCGTCCAATATTCTACTGTCCCCTCCCGAACTCTCAGAGC
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