CF833190

Overview
NameCF833190
Unique NameCF833190
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2871 contig Csv1_Contig2871:433..1200. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF833190 vs. ExPASy Swiss-Prot
Match: PALY_VITVI (Phenylalanine ammonia-lyase (Fragment) OS=Vitis vinifera GN=PAL PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 5.858e-88
Identity = 154/189 (81.48%), Postives = 171/189 (90.48%), Query Frame = -3 
Query:  191 LDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 757
            +DLRHLEENLK TVK TVS VAKK LT+GA+GELHPSRFCEKDLLK  DREHVFAYIDDPCSATYPLMQK+RQVLVEHALNNGE+EK  ++SIFQKI AFEEELK VLPKEVE+AR  VE+G+P+IPNRIKECRSYPLY+ VREELG+  LTGEKV SPGE+FDKVFTAMC+GKIIDP+L+CL  WNGA
Sbjct:  223 IDLRHLEENLKSTVKKTVSHVAKKTLTIGANGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLMQKVRQVLVEHALNNGESEKNGSTSIFQKIGAFEEELKAVLPKEVESARDGVESGNPSIPNRIKECRSYPLYKFVREELGTGLLTGEKVRSPGEDFDKVFTAMCEGKIIDPLLDCLSAWNGA 411
[Close]
BLAST of CF833190 vs. ExPASy Swiss-Prot
Match: PAL1_POPKI (Phenylalanine ammonia-lyase G1 OS=Populus kitakamiensis GN=PALG1 PE=3 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 9.353e-86
Identity = 149/189 (78.84%), Postives = 172/189 (91.01%), Query Frame = -3 
Query:  191 LDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 757
            +DLRH+EENLK+TVKNTVSQVAK+VLT+G +GELHPSR CEKDLLK  D+EHVFAYIDDPCSATYPLMQKLRQVLVEHAL NGE E  + +SIFQKI +FEEELKT+LPKEVE+AR  VENG+P +PNRIKECRSYPLY+ VREELG++ LTGEKV SPGE+FDKVFTA+C GK++DP+LECL+EWNGA
Sbjct:  489 VDLRHIEENLKNTVKNTVSQVAKRVLTMGFNGELHPSRLCEKDLLKLVDKEHVFAYIDDPCSATYPLMQKLRQVLVEHALVNGERETNSTTSIFQKIRSFEEELKTLLPKEVESARLEVENGNPVVPNRIKECRSYPLYKFVREELGTSLLTGEKVKSPGEDFDKVFTAICAGKLMDPLLECLKEWNGA 677
[Close]
BLAST of CF833190 vs. ExPASy Swiss-Prot
Match: PAL1_DAUCA (Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=PAL1 PE=3 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 3.554e-85
Identity = 150/189 (79.37%), Postives = 170/189 (89.95%), Query Frame = -3 
Query:  191 LDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 757
            +DLRHLEENLK TVKNTVSQVAKKVLT+G +GELHPSRFCE DLL+  DRE++FAYIDDPCSATYPLMQKLRQVLVEHAL NGE EK  ++SIFQKIAAFE+ELK +LPKEVE+AR  VE+G+P IPNRIKECRSYPLY+ +REELG+ +LTGEKVTSPGEEFDKVFTAM +G+IIDP+L CL  WNGA
Sbjct:  515 VDLRHLEENLKSTVKNTVSQVAKKVLTMGVNGELHPSRFCELDLLRVVDREYIFAYIDDPCSATYPLMQKLRQVLVEHALKNGETEKNLSTSIFQKIAAFEDELKALLPKEVESARAVVESGNPAIPNRIKECRSYPLYKFIREELGTVYLTGEKVTSPGEEFDKVFTAMSKGEIIDPLLACLESWNGA 703
[Close]
BLAST of CF833190 vs. ExPASy Swiss-Prot
Match: PALY_CITLI (Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL6 PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 4.642e-85
Identity = 147/189 (77.78%), Postives = 174/189 (92.06%), Query Frame = -3 
Query:  191 LDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 757
            +DLRHLEENLK+TVKNTVSQVAK+VLT+G +GELHPSRFCEKDL+K  DRE+VFAYIDDPCSA+ PLMQKLRQVLV+HAL+NG+ EK + +SIFQKI AFE+ELKT+LPKEVE AR  +E+G+  IPNRIKECRSYPLY++VRE++G++ LTGEKV SPGEEFDKVFTAMC+GK+IDPMLECL+EWNGA
Sbjct:  527 IDLRHLEENLKNTVKNTVSQVAKRVLTMGVNGELHPSRFCEKDLIKVVDREYVFAYIDDPCSASSPLMQKLRQVLVDHALDNGDREKNSTTSIFQKIGAFEDELKTLLPKEVEIARTELESGNAAIPNRIKECRSYPLYKIVREDIGTSLLTGEKVRSPGEEFDKVFTAMCEGKLIDPMLECLKEWNGA 715
[Close]
BLAST of CF833190 vs. ExPASy Swiss-Prot
Match: PALY_STYHU (Phenylalanine ammonia-lyase OS=Stylosanthes humilis GN=PAL17.1 PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 6.062e-85
Identity = 151/189 (79.89%), Postives = 164/189 (86.77%), Query Frame = -3 
Query:  191 LDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 757
            +DLRHLEENLK+TVKNTVSQVAK+ LT G +GELHPSRFCEKDLLK  DRE+ FAYIDDPCSATYPLMQKLRQVLVEHAL N ENEK  N+SIFQKI  FEEELKT+LPKEVE AR   ENG   IPN+IKECRSYPLY+ VREELG+  LTGEKV SPGEE DK+FTAMCQGKIIDP+LEC+ EWNGA
Sbjct:  522 IDLRHLEENLKNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKIVDREYCFAYIDDPCSATYPLMQKLRQVLVEHALANAENEKNVNTSIFQKITTFEEELKTLLPKEVEGARIAYENGQSAIPNKIKECRSYPLYKFVREELGTEMLTGEKVRSPGEECDKLFTAMCQGKIIDPLLECIGEWNGA 710
[Close]
BLAST of CF833190 vs. ExPASy Swiss-Prot
Match: PALY_PERAE (Phenylalanine ammonia-lyase OS=Persea americana GN=PAL PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 7.918e-85
Identity = 150/189 (79.37%), Postives = 169/189 (89.42%), Query Frame = -3 
Query:  191 LDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 757
            +DLRHLEENLK TVKNTVSQVAK+VLT+G +GELHPSRFCEKDL+K  D EH+FAYIDDPCS TYPLMQKLRQVLVEHAL NGE EK +++SIFQKI AFEEELKT LPKEVE+AR  +E G+  IPNRIKECRSYPLY+ VREEL ++ LTGEKV SPGEEFDKVF+A+CQGK+IDP+LECLREWNGA
Sbjct:  427 IDLRHLEENLKSTVKNTVSQVAKRVLTIGVNGELHPSRFCEKDLIKVVDGEHLFAYIDDPCSCTYPLMQKLRQVLVEHALINGEKEKDSSTSIFQKIGAFEEELKTHLPKEVESARIELERGNSAIPNRIKECRSYPLYKFVREELKTSLLTGEKVRSPGEEFDKVFSAICQGKVIDPLLECLREWNGA 615
[Close]
BLAST of CF833190 vs. ExPASy Swiss-Prot
Match: PAL2_ARATH (Phenylalanine ammonia-lyase 2 OS=Arabidopsis thaliana GN=PAL2 PE=1 SV=2)

HSP 1 Score: 313.538 bits (802), Expect = 7.918e-85
Identity = 149/189 (78.84%), Postives = 166/189 (87.83%), Query Frame = -3 
Query:  191 LDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 757
            +DLRHLEENL+ TVKNTVSQVAKKVLT G +GELHPSRFCEKDLLK  DRE VF Y+DDPCSATYPLMQ+LRQV+V+HAL+NGE EK A +SIFQKI AFEEELK VLPKEVE AR    NG+  IPNRIKECRSYPLYR VREELG+  LTGEKV SPGEEFDKVFTAMC+GK+IDP+++CL+EWNGA
Sbjct:  524 VDLRHLEENLRQTVKNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYPLMQRLRQVIVDHALSNGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGA 712
[Close]
BLAST of CF833190 vs. ExPASy Swiss-Prot
Match: PALY_MEDSA (Phenylalanine ammonia-lyase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 1.034e-84
Identity = 150/189 (79.37%), Postives = 168/189 (88.89%), Query Frame = -3 
Query:  191 LDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 757
            +DLRHLEENLK++VKNTVSQVAKK LT+G +GELHPSRFCEKDLLK  DREHVFAYIDDPCSATYPL QKLRQVLV+HAL NGE+EK  N+SIFQKIA FEEELKT+LPKEVE+AR   E+G+PTIPN+I  CRSYPLY+ VREELG+  LTGE V SPGEE DK+F+AMCQGKIIDP+LECL EWNGA
Sbjct:  532 IDLRHLEENLKNSVKNTVSQVAKKTLTMGVNGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLSQKLRQVLVDHALVNGESEKNFNTSIFQKIATFEEELKTLLPKEVESARTAYESGNPTIPNKINGCRSYPLYKFVREELGTGLLTGENVISPGEECDKLFSAMCQGKIIDPLLECLGEWNGA 720
[Close]
BLAST of CF833190 vs. ExPASy Swiss-Prot
Match: PALY_CAMSI (Phenylalanine ammonia-lyase OS=Camellia sinensis GN=PAL PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.351e-84
Identity = 144/189 (76.19%), Postives = 172/189 (91.01%), Query Frame = -3 
Query:  191 LDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 757
            +DLRH EENL++TVK+TVSQVAK+VLT+G +GELHPSRFCEKDLL+  DRE++FAYIDDPCSATYPLMQKLRQVLVEHAL NGE+EK  ++SIFQKI AFEEE+KT+LPKEVE+ R  +ENG+  IPNRIKECRSYPLY+ VREELG+  LTGEKV SPGEEFDKVFTA+C+G++IDP+++CL+EWNGA
Sbjct:  521 VDLRHFEENLRNTVKSTVSQVAKRVLTMGVNGELHPSRFCEKDLLRVVDREYIFAYIDDPCSATYPLMQKLRQVLVEHALKNGESEKNLSTSIFQKIRAFEEEIKTLLPKEVESTRAAIENGNSAIPNRIKECRSYPLYKFVREELGTELLTGEKVRSPGEEFDKVFTALCKGEMIDPLMDCLKEWNGA 709
[Close]
BLAST of CF833190 vs. ExPASy Swiss-Prot
Match: PAL3_PETCR (Phenylalanine ammonia-lyase 3 OS=Petroselinum crispum GN=PAL3 PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.764e-84
Identity = 146/189 (77.25%), Postives = 170/189 (89.95%), Query Frame = -3 
Query:  191 LDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 757
            +DLRHLEENLK TVKNTVSQVAK+VLT+G +GELHPSRFCEKDLL+  DRE++FAYIDDPCSATYPLMQKLR+ LVEHALNNG+ E+  ++SIFQKIAAFE+ELK +LPKEVE AR  +E+G+P IPNRIKECRSYPLY+ VREELG+ +LTGEKV SPGEEF+KVFTAM +G+IIDP+LECL  WNGA
Sbjct:  525 IDLRHLEENLKSTVKNTVSQVAKRVLTMGVNGELHPSRFCEKDLLRVVDREYIFAYIDDPCSATYPLMQKLRETLVEHALNNGDKERNLSTSIFQKIAAFEDELKALLPKEVETARAALESGNPAIPNRIKECRSYPLYKFVREELGTEYLTGEKVRSPGEEFEKVFTAMSKGEIIDPLLECLESWNGA 713
The following BLAST results are available for this feature:
BLAST of CF833190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PALY_VITVI5.858e-8881.48Phenylalanine ammonia-lyase (Fragment) OS=Vitis vi... [more]
PAL1_POPKI9.353e-8678.84Phenylalanine ammonia-lyase G1 OS=Populus kitakami... [more]
PAL1_DAUCA3.554e-8579.37Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=... [more]
PALY_CITLI4.642e-8577.78Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL... [more]
PALY_STYHU6.062e-8579.89Phenylalanine ammonia-lyase OS=Stylosanthes humili... [more]
PALY_PERAE7.918e-8579.37Phenylalanine ammonia-lyase OS=Persea americana GN... [more]
PAL2_ARATH7.918e-8578.84Phenylalanine ammonia-lyase 2 OS=Arabidopsis thali... [more]
PALY_MEDSA1.034e-8479.37Phenylalanine ammonia-lyase OS=Medicago sativa PE=... [more]
PALY_CAMSI1.351e-8476.19Phenylalanine ammonia-lyase OS=Camellia sinensis G... [more]
PAL3_PETCR1.764e-8477.25Phenylalanine ammonia-lyase 3 OS=Petroselinum cris... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03C24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833190 ID=CF833190; Name=CF833190; organism=Citrus sinensis; type=EST; length=768bp
TTTTTTTTTTTTTTTTTAAAGGACAATAAGTCTTATAACCTTATATGAAA
AAACCAATAGAAGTGATTGAAATATTACAGATGAATTTGTACCACTGACT
CGCATGGGCAAATTCTATGAACACAAGAACACAAGGGATTGAAGACCGTG
TTATTAAACAAAATAAAAACAACTAACAAATTGGAAGAGGGGCGCCATTC
CATTCCCTGAGACATTCCAGCATTGGATCAATGATCTTGCCCTGGCACAT
TGCTGTAAACACTTTGTCAAATTCCTCGCCGGGCGATGTAACTTTTTCCC
CTGTTAGAAAATTAGACCCGAGCTCCTCCCTCACTAACCTGTACAAAGGG
TAAGACCTGCATTCTTTGATCCTGTTGGGAATTGTTGGACTTCCATTCTC
AACAGTCTGCCTGGCGTTCTCAACTTCTTTGGGCAAAACGGTTTTCAATT
CCTCCTCAAAGGCTGCAATCTTCTGGAAGATTGAAGAGTTGGCAGTCTTC
TCGTTCTCTCCATTGTTCAGTGCGTGCTCAACAAGTACTTGCCTTAGCTT
TTGCATCAATGGATAGGTAGCACTGCAGGGGTCATCAATGTATGCAAAGA
CGTGTTCGCGATCAGCCGCTTTGAGCAGATCCTTCTCACAGAATCTTGAT
GGATGAAGCTCTCCACTAGCACCGACGGTTAAGACTTTCTTAGCTACTTG
GCTGACAGTATTCTTGACTGTATGCTTCAAATTCTCCTCCAAATGTCTCA
AATCAAGTTTTTTTTTTT
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