CF833229

Overview
NameCF833229
Unique NameCF833229
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7093 contig Csv1_Contig7093:173..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF833229 vs. ExPASy Swiss-Prot
Match: ASOL_BRANA (L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.718e-65
Identity = 126/231 (54.55%), Postives = 163/231 (70.56%), Query Frame = 1
Query:   22 SLNFRIQNHKMTLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGG-VFRIGSISDNPTGGGIYQ---DTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVRMDGG 702
            S+NFRIQNHKM LVE+EG+H LQ  Y SLDVHVGQ +  +VTA+Q  +DYY+V SSRF  TV+TTTG+L Y    GP S  +P GP V   WSLNQ RS R NLTAS  RPNPQGSYHYG IN T+TI+L ++ G+V+GK R+A+N VS    +TPLKLA+YF I   VF+  +I+D+PT   I     +  V+   +R F+E+VF+N E  +QS+HL+GY F+ V ++ G
Sbjct:  229 SINFRIQNHKMKLVEMEGSHVLQNDYDSLDVHVGQCFGTIVTANQEPKDYYMVASSRFLKTVITTTGLLRYEGGKGPASSQLPAGP-VGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGKVDGKLRFALNGVSHTEPETPLKLAEYFGISDKVFKYDTITDDPTPEQIKNIKIEPNVLNITHRTFVEVVFENHEKSVQSWHLDGYSFFSVAVEPG 458          
BLAST of CF833229 vs. ExPASy Swiss-Prot
Match: ASOL_TOBAC (L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 7.169e-58
Identity = 116/235 (49.36%), Postives = 152/235 (64.68%), Query Frame = 1
Query:   19 NSLNFRIQNHKMTLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGP---TVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYF-KIGGVFRIGSISDNPTG--GGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVRMDGGQ 705
            +S+N R Q H M LVE+EG+HT+Q  Y SLD+HVGQ  SVLVTADQ  +DYY+VVSSRF    L++  I+ Y+N  GP S  +P  P   T  I WS+NQ RS R NLTAS  RPNPQGSYHYG IN T+TI++ +S  QV GK RY +N +S    +TPLKL +YF      F+   ++D        +   T V  A YR F+EI+F+N E  I++YHL+GY F+ V ++ G+
Sbjct:  226 SSVNIRFQGHPMKLVELEGSHTVQNIYDSLDLHVGQCLSVLVTADQEPKDYYLVVSSRFLKQALSSVAIIRYANGKGPASPELPTPPPENTEGIAWSMNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKIFNSMSQVGGKLRYGLNGISHTNGETPLKLVEYFGATNKAFKYDLMADEAPADPSKLTIATNVKNATYRNFVEIIFENHEKTIRTYHLDGYSFFAVAVEPGR 460          
BLAST of CF833229 vs. ExPASy Swiss-Prot
Match: SKS2_ARATH (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.764e-56
Identity = 117/236 (49.58%), Postives = 158/236 (66.95%), Query Frame = 1
Query:   22 SLNFRIQNHKMTLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPA-RDYYIVVSSRFTSTV----LTTTGILHYSNSAGPVSGPIPGGPT-VQIDWS-LNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSS-SAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQ-DTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVRMDGG 702
            SLNFRIQNHK+ L+E EG +T Q  ++  DVHVGQSYS LVT DQ A  DYYIV S+RF +      +T  GILHYSNS GP SGP+P   T V   WS +NQ R+I+ N +ASG RPNPQGS+HYG IN T+T  L S    ++NGK R  +N +SF+   TP++LAD  K+ G + +    D P    + +  ++++ A Y+ FI+++FQN++  IQS+H++GY F+VV MD G
Sbjct:  235 SLNFRIQNHKLLLIETEGRYTSQMNFTDFDVHVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQRVTGVGILHYSNSKGPASGPLPVSATDVNHPWSAMNQPRAIKQNTSASGARPNPQGSFHYGQINITRTYILRSLPPTKINGKLRATLNGISFVNPSTPMRLADDHKVKGDYML-DFPDRPLDEKLPRLSSSIINATYKGFIQVIFQNNDTKIQSFHIDGYAFYVVAMDFG 469          
BLAST of CF833229 vs. ExPASy Swiss-Prot
Match: SKS1_ARATH (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.680e-55
Identity = 117/235 (49.79%), Postives = 154/235 (65.53%), Query Frame = 1
Query:   22 SLNFRIQNHKMTLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPA-RDYYIVVSSRFTSTV----LTTTGILHYSNSAGPVSGPIPGGPT-VQIDWS-LNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQ-VNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVRMDGG 702
            SLNFRIQNH + LVE EG +T Q  ++  DVHVGQSYS LVT DQ A  DYYIV S+RF +      +T   ILHYSNS GPVSGP+P   T V   WS ++Q ++IR N +ASG RPNPQGS+HYG IN T T  L S     +NG  R  +N +SF+   TP++LAD  K+ G +++    D P    +  D +++ A Y+ FI++VFQN++  IQS+H++GY F+VV MD G
Sbjct:  236 SLNFRIQNHSLLLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQDATSDYYIVASARFVNETVWQRVTGVAILHYSNSKGPVSGPLPVPKTDVSSPWSAMSQPKTIRQNTSASGARPNPQGSFHYGQINITNTYILRSLPPTIINGALRATLNGISFVNPSTPVRLADRNKVKGAYKL-DFPDRPFNRPLRLDRSMINATYKGFIQVVFQNNDTKIQSFHVDGYSFFVVGMDFG 469          
BLAST of CF833229 vs. ExPASy Swiss-Prot
Match: SKU5_ARATH (Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.501e-52
Identity = 111/236 (47.03%), Postives = 152/236 (64.41%), Query Frame = 1
Query:   22 SLNFRIQNHKMTLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPA-RDYYIVVSSRFTSTVL----TTTGILHYSNSAGPVSGPIPGGPTVQID--WSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAG-QVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVRMDGGQ 705
            SLNFRIQ H + L E EG++T+Q  Y+SLD+HVGQSYS LVT DQ A  DYYIV S+R  +  +    T  GIL Y+NS G   G +P GP  + D  +S+NQARSIR N++ASG RPNPQGS+ YG IN T    L +     ++GK+R  +N +SF    TP++LAD  K+  V+++      P  G     T+++   YR F+E+V QN++  +QSYH++GY F+VV MD G+
Sbjct:  233 SLNFRIQGHNLVLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARVVNETIWRRVTGVGILKYTNSKGKAKGQLPPGPQDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGSINVTDVYVLRNMPPVTISGKRRTTLNGISFKNPSTPIRLADKLKVKDVYKL-DFPKRPLTGPAKVATSIINGTYRGFMEVVLQNNDTKMQSYHMSGYAFFVVGMDYGE 467          
BLAST of CF833229 vs. ExPASy Swiss-Prot
Match: ASO_CUCSA (L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15
Identity = 71/258 (27.52%), Postives = 120/258 (46.51%), Query Frame = 1
Query:   13 SLNSLNFRIQNHKMTLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ-PARDYYIVVSSRF----TSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFR-------------IGSISDNP---TGGGIYQDTAVMGADYRAFIEIVFQNDEDI------IQSYHLNGYQFWVVRMDGGQ 705
            +L SLNF I NH++ +VE +G +      S +D++ G+SYSVL+T DQ P  +Y++ +  R     T   LT    L  S S  P+S P P  P  +     +++++    + A+   P P   Y+       + + L ++  ++NG  ++AIN+VS     TP   A   ++   F              I +   NP   TG G+Y+    MG      ++++ QN   +      I  +HL+G+ FWV+    G+
Sbjct:  258 ALASLNFAIGNHELLVVEADGNYVQPFVTSDIDIYSGESYSVLITTDQNPLENYWVSIGVRARLPKTPPGLTLLNYLPNSASKLPISPP-PETPHWE---DFDRSKNFTFRIFAAMGSPKPPVRYN-------RRLFLLNTQNRINGFMKWAINNVSLALPPTPYLAAMKMRLNTAFNQNPPPETFPLNYDINNPPPNPETTTGNGVYKFN--MGET----VDVILQNANMLNPNMSEIHPWHLHGHDFWVLGYGEGK 498          
BLAST of CF833229 vs. ExPASy Swiss-Prot
Match: ASO_CUCMA (L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 72/259 (27.80%), Postives = 115/259 (44.40%), Query Frame = 1
Query:   13 SLNSLNFRIQNHKMTLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ-PARDYYIVVSSR----FTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDW-SLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIG----------SISDNPT------GGGIYQDTAVMGADYRAFIEIVFQNDEDI------IQSYHLNGYQFWVVRMDGGQ 705
            +L +LNF I NH + +VE +G +      S +D++ G+SYSVL+T DQ P+ +Y++ V +R     T   LT    L  S S  P S P P  P     W   +++++    +TA+   P P        + + + I L ++   +NG  ++AIN VS     TP   A  F +   F              I   PT      G G+YQ            ++++ QN   +      I  +HL+G+ FWV+    G+
Sbjct:  253 ALAALNFAIGNHPLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRGRHPNTPPGLTLLNYLPNSVSKLPTSPP-PETPA----WDDFDRSKNFTYRITAAMGSPKPP-------VKSNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKFNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTKIGNGVYQ------FKIGEIVDVILQNANMMKENLSEIHPWHLHGHDFWVLGYGDGK 493          
BLAST of CF833229 vs. ExPASy Swiss-Prot
Match: ASO_TOBAC (L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13
Identity = 69/259 (26.64%), Postives = 112/259 (43.24%), Query Frame = 1
Query:   13 SLNSLNFRIQNHKMTLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ-PARDYYIVVSSR----FTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTA--SGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFI---------------PADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQN------DEDIIQSYHLNGYQFWVVRMDGGQ 705
            +L SL+  I  HKM +VE +G +    +   +D++ G+SYSVL   DQ P ++Y+I ++ R     T   LT    L  S S  P   P    P   +    N ++S  + + A    P+P PQ      L+NT           +++G  ++AIN+VS +                 DT     ++ K   V +    S++  G G+Y         +   I+I+ QN      D   I  +HL+G+ FWV+    G+
Sbjct:  251 ALGSLSLAIGGHKMVVVEADGNYVQPFSVQDMDIYSGESYSVLFKTDQDPTKNYWISINVRGREPKTPQGLTLLNYLPNSASKFPTLPP----PIAPLWNDYNHSKSFSNKIFALMGSPKPPPQNHRRIILLNT---------QNKIDGYTKWAINNVSLVLPTQLYLGSIRYGINAFDTKPPPDNFPKDYDVLKQAPNSNSTYGNGVYM------LKFNTTIDIILQNANALAKDVSEIHPWHLHGHDFWVLGYGEGK 490          
BLAST of CF833229 vs. ExPASy Swiss-Prot
Match: ASO_CUCPM (L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13
Identity = 71/259 (27.41%), Postives = 118/259 (45.56%), Query Frame = 1
Query:   13 SLNSLNFRIQNHKMTLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ-PARDYYIVVSSRF----TSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDW-SLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIG----------SISDNPT------GGGIYQDTAVMGADYRAFIEIVFQN----DEDIIQS--YHLNGYQFWVVRMDGGQ 705
            +L +LNF I NH++ +VE +G +      S +D++ G+SYSVL+T DQ P+ +Y++ V +R     T   LT    L  S S  P S P P  P     W   +++++    +TA+   P P        +   + I L ++   +NG  ++AIN VS     TP   A  + +   F              I   PT      G G+YQ            ++++ QN     E++ ++  +HL+G+ FWV+    G+
Sbjct:  223 ALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPP-PQTPA----WDDFDRSKNFTYRITAAMGSPKPP-------VKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQ------FKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGK 463          
BLAST of CF833229 vs. ExPASy Swiss-Prot
Match: LAC22_ORYSJ (Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11
Identity = 69/248 (27.82%), Postives = 107/248 (43.15%), Query Frame = 1
Query:   19 NSLNFRIQNHKMTLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTV----LTTTGILHYSNSAG------PVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRY-AINSVSFIPADTPLKLADYFKIGGVF----------RIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDII----QSYHLNGYQFWVV 687
            + L F++  H++T+VEV+  +T      +L +  GQ+ +VLV A+Q A  Y + VS    + V     T T  LHY+N+         +  P P   T  +    +   S+ S      P   PQ   H  L+  T  + ++     +NG +    IN+V+FI   TP+  A Y+ I GVF          +       P        T V    Y A +++V Q D  II       HL+G+ F+VV
Sbjct:  236 DDLFFKVAGHELTVVEVDAVYTKPFKTDTLLITPGQTTNVLVRANQGAGRYLLSVSPFMDAPVQVDNKTGTATLHYANTVSSSMASLTLVKPPPQNATHIVSKFTDSLHSLNSK---EYPANVPQTVDHSLLL--TVGVGVNPCPSCINGTRVVGTINNVTFIMPSTPILQAHYYNIPGVFTEDFPATPLHKFNYTGSGPKNLQTMNGTRVYRLPYNASVQVVLQ-DTGIISPESHPIHLHGFNFFVV 477          
The following BLAST results are available for this feature:
BLAST of CF833229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
ASOL_BRANA2.718e-6554.55L-ascorbate oxidase homolog OS=Brassica napus GN=B... [more]
ASOL_TOBAC7.169e-5849.36L-ascorbate oxidase homolog OS=Nicotiana tabacum P... [more]
SKS2_ARATH8.764e-5649.58Monocopper oxidase-like protein SKS2 OS=Arabidopsi... [more]
SKS1_ARATH5.680e-5549.79Monocopper oxidase-like protein SKS1 OS=Arabidopsi... [more]
SKU5_ARATH4.501e-5247.03Monocopper oxidase-like protein SKU5 OS=Arabidopsi... [more]
ASO_CUCSA1.512e-1527.52L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1[more]
ASO_CUCMA3.725e-1427.80L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=... [more]
ASO_TOBAC1.415e-1326.64L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE... [more]
ASO_CUCPM1.849e-1327.41L-ascorbate oxidase OS=Cucurbita pepo var. melopep... [more]
LAC22_ORYSJ5.034e-1127.82Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_03D24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03D24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833229 ID=CF833229; Name=CF833229; organism=Citrus sinensis; type=EST; length=706bp
CAAATGTTGGACTCGCTAAACTCACTCAATTTCCGCATTCAAAACCATAA
GATGACGTTGGTAGAAGTTGAGGGAACACATACCCTCCAGACTACCTACT
CATCACTTGATGTTCATGTCGGACAATCCTACTCCGTTTTGGTTACTGCT
GATCAACCTGCACGGGACTATTACATTGTTGTTTCCTCTCGCTTCACCTC
CACTGTCCTCACCACCACCGGCATTCTTCATTACAGTAACTCTGCAGGTC
CAGTTTCAGGCCCCATCCCAGGTGGACCAACTGTCCAAATTGACTGGTCA
CTAAACCAAGCACGCTCTATCAGGTCTAATCTCACAGCAAGTGGACCAAG
GCCTAACCCACAGGGTTCATACCACTATGGTCTCATAAACACTACCAAAA
CTATCAGGCTTTCAAGTTCTGCTGGGCAAGTTAATGGCAAGCAGAGATAT
GCAATCAACAGCGTGTCCTTTATTCCAGCTGACACTCCCCTAAAGCTTGC
TGACTACTTCAAGATTGGAGGAGTTTTCCGCATCGGAAGCATTTCTGATA
ATCCTACCGGTGGAGGGATTTACCAAGACACAGCAGTTATGGGGGCTGAC
TACAGAGCTTTTATTGAAATTGTGTTCCAAAATGATGAAGACATTATCCA
GAGCTATCACCTTAATGGCTACCAATTTTGGGTTGTCCGTATGGATGGAG
GCCAAT
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