CF833236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833236 vs. ExPASy Swiss-Prot
Match: SLY1_ARATH (SEC1 family transport protein SLY1 OS=Arabidopsis thaliana GN=SLY1 PE=1 SV=1) HSP 1 Score: 389.423 bits (999), Expect = 1.275e-107 Identity = 204/276 (73.91%), Postives = 230/276 (83.33%), Query Frame = 2 Query: 2 IGTKHLMNAVNSLPELTVRKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMIRGGIDRSELMGVLKGKGSKMDKLRFAIIYLISSETINQSEVEAVEAALRESEVDISAFQYVKKIK--XXXXXXXXXXXXXXXXIVDWAEKLYGQSISAVTAGVKNLLSNDRQLALTRTVEALVEGRPNPEIDSYLMFDPRAPK-SSSGSNHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALLGQKMGLGNTVAPST 820 I T+HLMN V SLPELT RK+VIDKHTNIAT LLG+IKERS+D++ KKE+DMM+RGGIDR+ELM LKGKG+KMDKLRFAI+YLIS+ETINQSEVEAVEAAL E+E D SAFQYVKKIK IVDWAEKLYGQSISAVTAGVKNLLS+D+QLA+TRTVEAL EG+PNPEIDSY DPRAPK SSSG +H+KGPF+EAIVFMIGGGNY+EYGSLQEL +RQ VK+VIYG TEIL G E VEQL LLG+KMGLG VA ++ Sbjct: 347 IHTEHLMNTVKSLPELTERKKVIDKHTNIATALLGQIKERSIDAFTKKESDMMMRGGIDRTELMAALKGKGTKMDKLRFAIMYLISTETINQSEVEAVEAALNEAEADTSAFQYVKKIKSLNASFAATSANSASRSNIVDWAEKLYGQSISAVTAGVKNLLSSDQQLAVTRTVEALTEGKPNPEIDSYRFLDPRAPKSSSSGGSHVKGPFREAIVFMIGGGNYVEYGSLQELTQRQLTVKNVIYGATEILNGGELVEQLGLLGKKMGLGGPVASTS 622
BLAST of CF833236 vs. ExPASy Swiss-Prot
Match: SLY1_ORYSJ (SEC1 family transport protein SLY1 OS=Oryza sativa subsp. japonica GN=SLY1 PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 8.592e-88 Identity = 170/265 (64.15%), Postives = 206/265 (77.74%), Query Frame = 2 Query: 8 TKHLMNAVNSLPELTVRKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMIRGGIDRSELMGVLKGKGSKMDKLRFAIIYLISSETINQSEVEAVEAALRESEVDISAFQYVKKIK-XXXXXXXXXXXXXXXXIVDWAEKLYGQSISAVTAGVKNLLSNDRQLALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSSGSNHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALLGQKMGLG 799 T+HLMNAVNSLPELT RK++IDKHTNIAT LLG IK RSLD Y + EN M++ G +DR++LM +L+G G+K DKLR A+ YL+S ET S++E VEAALRESEVD+SAFQYVK+IK IVDWAEKLYG SISA+T GV+NLLS+ +QLA TR VEAL+EG+PNPE+D+YL+FDPRAPKS + + +GPF+EAIVFMIGGGNY+EY SL EL +R Q K VIYG TEIL G EF++QL+ LGQK GLG Sbjct: 352 TRHLMNAVNSLPELTERKKMIDKHTNIATALLGHIKGRSLDGYFECENSMLVDGTLDRTKLMNLLRGNGTKEDKLRLAVTYLLSFETPVPSDLEQVEAALRESEVDMSAFQYVKRIKSLNSQFAGASNTASKVNIVDWAEKLYGHSISAMT-GVRNLLSDGKQLAATRAVEALMEGKPNPEVDNYLLFDPRAPKSGT-AGQFRGPFREAIVFMIGGGNYIEYRSLTELTQRSQTTKQVIYGATEILNGVEFIQQLSELGQKAGLG 614
BLAST of CF833236 vs. ExPASy Swiss-Prot
Match: SCFD1_MOUSE (Sec1 family domain-containing protein 1 OS=Mus musculus GN=Scfd1 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 7.375e-39 Identity = 98/266 (36.84%), Postives = 155/266 (58.27%), Query Frame = 2 Query: 8 TKHLMNAVNSLPELTVRKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMIRGGIDRSELMGVLK--GKGSKMDKLRFAIIYLISSETI-NQSEVEAVEAALRESEVDISAFQYVKKIKXXXXXXXXXXXXXXXXI--VDWAEKLYGQSISAVTAGVKNLLSNDRQLALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSSGS-NHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALLGQK 787 T L +AV+SLPEL +K++ID HTN+AT +L IK R LD Y + E +M + +D+S L+ V+ G+ DK+R +IY IS++ ++ ++E + AL ++ ++S QY+K+ K + ++ V GVKNL+ + L +TR ++ L+E + NPE D Y FDP+ +S+ S K PF+EAIVF++GGGNY+EY +L + K +Q KH++YG +EI +F++QL+ LGQK Sbjct: 376 TAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKS-LLDVISDPDAGTPEDKMRLFLIYYISAQQAPSEVDLEQYKKALTDAGCNLSPLQYIKQWKAFAKMASTPASYGNTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQNLPVTRILDNLMEMKSNPETDDYRYFDPKMLRSNDSSVPRNKSPFQEAIVFVVGGGNYIEYQNLVDYIKAKQG-KHILYGCSEIFNATQFIKQLSQLGQK 639
BLAST of CF833236 vs. ExPASy Swiss-Prot
Match: SCFD1_RAT (Sec1 family domain-containing protein 1 OS=Rattus norvegicus GN=Scfd1 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 9.632e-39 Identity = 98/266 (36.84%), Postives = 155/266 (58.27%), Query Frame = 2 Query: 8 TKHLMNAVNSLPELTVRKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMIRGGIDRSELMGVLK--GKGSKMDKLRFAIIYLISSETI-NQSEVEAVEAALRESEVDISAFQYVKKIKXXXXXXXXXXXXXXXXI--VDWAEKLYGQSISAVTAGVKNLLSNDRQLALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSSGS-NHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALLGQK 787 T L +AV+SLPEL +K++ID HTN+AT +L IK R LD Y + E +M + +D+S L+ V+ G+ DK+R +IY IS++ ++ ++E + AL ++ ++S QY+K+ K + ++ V GVKNL+ + L +TR ++ L+E + NPE D Y FDP+ +S+ S K PF+EAIVF++GGGNY+EY +L + K +Q KH++YG +EI +F++QL+ LGQK Sbjct: 374 TAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKS-LLDVISDPDAGTPEDKMRLFLIYYISAQQAPSEVDLEQYKKALTDAGCNLSPLQYIKQWKAFAKMASTPASYGNTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQNLPVTRILDNLMEMKSNPETDDYRYFDPKMLRSNDSSVPRNKSPFQEAIVFVVGGGNYIEYQNLVDYIKGKQG-KHILYGCSEIFNATQFIKQLSQLGQK 637
BLAST of CF833236 vs. ExPASy Swiss-Prot
Match: SCFD1_HUMAN (Sec1 family domain-containing protein 1 OS=Homo sapiens GN=SCFD1 PE=1 SV=4) HSP 1 Score: 157.918 bits (398), Expect = 6.244e-38 Identity = 94/266 (35.34%), Postives = 155/266 (58.27%), Query Frame = 2 Query: 8 TKHLMNAVNSLPELTVRKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMIRGGIDRSELMGVLK--GKGSKMDKLRFAIIYLISSETI-NQSEVEAVEAALRESEVDISAFQYVKKIKXXXXXXXXXXXXXXXXI--VDWAEKLYGQSISAVTAGVKNLLSNDRQLALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSSGS-NHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALLGQK 787 T L +AV+SLPEL +K++ID HTN+AT +L IK R LD Y + E +M + +D+S L+ ++ G+ DK+R +IY IS++ +++++E + AL ++ +++ QY+K+ K + ++ V GVKNL+ + L +TR ++ L+E + NPE D Y FDP+ + + S K PF+EAIVF++GGGNY+EY +L + K +Q KH++YG +E+ +F++QL+ LGQK Sbjct: 379 TAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKS-LLDIISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKALTDAGCNLNPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQNLPVTRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLVDYIKGKQG-KHILYGCSELFNATQFIKQLSQLGQK 642
BLAST of CF833236 vs. ExPASy Swiss-Prot
Match: SLY1_SCHPO (Protein sly1 OS=Schizosaccharomyces pombe GN=sly1 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.968e-36 Identity = 92/283 (32.51%), Postives = 161/283 (56.89%), Query Frame = 2 Query: 14 HLMNAVNSLPELTVRKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMIRGGIDRSELMGVLKGK--GSKMDKLRFAIIYLISSETINQSEVEAVEAALRESEVDISAFQYVKKIKXXXXXXXXXXXXXXXXIVDWAEKLYG--QSISA----------------VTAGVKNLLSNDRQLALTRTVEALVEGRPNP---EIDSYLMFDPRAPKSSSGSN-----HLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALL 778 +L +AV+ LPELT RKQ++D H NIAT LL I+ER LD + + E+++ G++RS ++ + K G+ DKLRF II+ +S +++ S+++A E AL + + A +VK+++ + L+ S+S + +GV+NL+ + +T V++L++ +P + +SYL+ DP++ ++ + +N + + F EAIV ++GGGNY+EYG+L + A+ Q P K +IYG+T+IL+ EF+E++A L Sbjct: 359 YLKSAVSLLPELTARKQILDMHMNIATALLKAIQERHLDDFFQLEDNIT---GLNRSAILACINNKEQGTPEDKLRFFIIWYLSVDSVPASDLQAYEEALVNNGCTLEALNFVKRVREITKMTMLASSTTRPATGQTGDNLFRGFSSLSTRFTDRFKEAGIGGLENIISGVRNLIPFRKDGTITSIVQSLMDPGSSPASKQTESYLLLDPKSARAITVNNDPRAMNKRQTFSEAIVCVLGGGNYLEYGNLADWAREQNPKKRIIYGSTDILSPSEFMEEMASL 638
BLAST of CF833236 vs. ExPASy Swiss-Prot
Match: SLY1_DROME (Protein sly1 homolog OS=Drosophila melanogaster GN=Slh PE=2 SV=3) HSP 1 Score: 147.132 bits (370), Expect = 1.102e-34 Identity = 97/285 (34.04%), Postives = 147/285 (51.58%), Query Frame = 2 Query: 8 TKHLMNAVNSLPELTVRKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMIRGGIDRSELMGVLKGK-GSKMDKLRFAIIYLISSETINQSEVEAVEAALRESEVDISAFQYVKKIKXXXXXXXXXXXXXXXX-----IVDWAEKLYGQSISAVTAGVKNLLSND------------------RQLALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSSGSNHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQP---VKHVIYGTTEILTGDEFVEQLALLG 781 T L NAVNSLP+L +K++ID HT IAT +L IK R LDS+ + E +M + +DR L + G+ G DKLR IIY I ++ + +SE E ++ AL+ + D++A YV++ K V KL Q S V GVKNL+ + L +T+ E ++E R N E D YL DP+ K + PF++A+VFM+GGGNY+EY +L + K++Q + +IYG + + +F+++L+ LG Sbjct: 363 TARLTNAVNSLPQLMEKKRLIDMHTKIATAILNFIKARRLDSFFEIEEKVMSKQTLDRPLLDLLRDGEFGQAEDKLRLYIIYFICAQQLPESEQERLKEALQAAGCDLTALAYVQRWKGIMNRSPSISQATQYEGGGTKTVSMFTKLVSQGSSFVMEGVKNLVVKRHVSFSFQIQIQVLYQNCLQNLPVTKITEQVMECRSNAETDDYLYLDPKLLKGGEVLPKNRAPFQDAVVFMVGGGNYIEYQNLVDFIKQKQTSNVQRRIIYGASTLTNARQFLKELSALG 647
BLAST of CF833236 vs. ExPASy Swiss-Prot
Match: SLY1_DROVI (Protein sly1 homolog OS=Drosophila virilis GN=Slh PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.298e-32 Identity = 97/290 (33.45%), Postives = 148/290 (51.03%), Query Frame = 2 Query: 8 TKHLMNAVNSLPELTVRKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMIRGGIDRSELMGVLKGK--GSKMDKLRFAIIYLISSETINQSEVEAVEAALRESEVDISAFQYVKKIKXXXXXXXXXXXXXXXX-----IVDWAEKLYGQSISAVTAGVKNL-----------LSNDR-----------QLALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSSGSNHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPV---KHVIYGTTEILTGDEFVEQLALLG 781 T L +AVNSLP+L +K++ID HT IAT +L IK R LDSY + E +M + +D+ L+ +L+ G DKLR IIY I ++ + + E+E + AL+ + D++A YV++ K V KL Q S V GVKNL L +DR L +T+ E ++E R N E D YL P+ K + PF++A+VFM+GGGNY+EY +L + K++Q + +IYG + + +F+++L+ LG Sbjct: 359 TAMLTSAVNSLPQLMEKKRLIDMHTKIATAILNCIKARRLDSYFEIEEKIMSKQTLDKP-LLELLRDAEFGQPEDKLRLYIIYYICAQQLPEPELERLREALQSAGCDLTALAYVQRWKSIMNRSPSISQATQYEGGGTRTVSMFTKLVSQGSSFVMEGVKNLVVKRHVNINLRLGSDRVKAKLIPNFLENLPVTKITEQVMECRSNAETDDYLYLAPKLLKGGDVLPKNRAPFQDAVVFMVGGGNYIEYQNLVDFIKQKQTSNVHRRIIYGGSTLTNARQFLKELSALG 647
BLAST of CF833236 vs. ExPASy Swiss-Prot
Match: SCFD1_DICDI (Sec1 family domain-containing protein 1 homolog OS=Dictyostelium discoideum GN=scfd1 PE=3 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 4.792e-30 Identity = 93/285 (32.63%), Postives = 146/285 (51.23%), Query Frame = 2 Query: 8 TKHLMNAVNSLPELTVRKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMIRGGIDRSEL--------MGVLKGKGSKMDKLRFAIIYLISSETINQSEVEAVEAALRESEVDISAFQYVKKIKXXXXXXXXXXXXXXXXIVDW---AEKLYG--QSISAVTA-------------GVKNLLSNDRQLALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSSGSNHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALLGQ 784 TK L N V + E +K++ID HTN+AT L I++R +D + E ++ R D+ EL +G G+G+ DK+R IIY +S++ + QSE++ E AL + D+S + KK K + K+ G Q +++VT GV+ LL + L +TR VE++++ + + D YL DP+ S+ PFKEAIVF +GGGNY+EY +LQ+ +K+ K +IYG+ E+LT EF+ Q+ L + Sbjct: 395 TKGLGNLVQEMDE---KKRLIDIHTNLATDLTKNIRDRQIDCFFAMEESIITRSLTDKKELHSLITSPIVGETGGRGTLEDKIRLLIIYFLSTKNVPQSEMDQYEDALTKMGADLSTLDFFKKTKAFNESLTAIANVNQSSTQSSNTASGKIGGFMQMMTSVTGYQGVESFTNFFQQGVRALLPKSKDLFVTRIVESIMDLKNTLDAD-YLYLDPKIQNKSNVPKRTT-PFKEAIVFTVGGGNYVEYQNLQDFSKKHN--KKIIYGSNELLTSKEFLNQIKNLNK 672
BLAST of CF833236 vs. ExPASy Swiss-Prot
Match: SLY1_YEAST (Protein SLY1 OS=Saccharomyces cerevisiae GN=SLY1 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.650e-28 Identity = 88/292 (30.14%), Postives = 148/292 (50.68%), Query Frame = 2 Query: 8 TKHLMNAVNSLPELTVRKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMIRGGIDRSELMGVLK-GKGSKM-DKLR-FAIIYLISSETINQSEVEAVEAALRESEVDISAFQYVKKIKXXXXXXXXXXXXXXXXIVDWAEKLYGQS------------------ISAVTAGVKNLLSNDRQLALTRTVEALVE----GRPNPEI-DSYLMFDPRAPKSSSGSNHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQ-QPVKHVIYGTTEILTGDEFVEQLALLGQKMGLGN 802 T + V LPELT +K ID H NI LL +++ +SLD++ + E D RS + +LK GK + + DKLR F ++YL S+ + + V+ VE +E++ DI+A +YV K++ + D ++ + S + ++ +G+K LL + + +T V+A+++ + N E DSYL DP+ + S + + +++VF++GGGNY+EY +LQE A Q K V+YG+T I T EF+ +++ LG N Sbjct: 377 TVQIQEVVKKLPELTAKKNTIDTHMNIFAALLSQLESKSLDTFFEVEQDP--GSTKTRSRFLDILKDGKTNNLEDKLRSFIVLYLTSTTGLPKDFVQNVENYFKENDYDINALKYVYKLREFMQLSNMSLQNKS--LEDGSDSAFKPSNLTLSGIYGLTEGKLQGGVGSLISGIKKLLPEKKTIPITNVVDAIMDPLNSSQKNLETTDSYLYIDPKITRGSHTRKPKRQSYNKSLVFVVGGGNYLEYQNLQEWAHSQLHNPKKVMYGSTAITTPAEFLNEISRLGASNSSNN 664 The following BLAST results are available for this feature:
BLAST of CF833236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF833236 ID=CF833236; Name=CF833236; organism=Citrus sinensis; type=EST; length=824bpback to top |