CF833237
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833237 vs. ExPASy Swiss-Prot
Match: SLY1_ARATH (SEC1 family transport protein SLY1 OS=Arabidopsis thaliana GN=SLY1 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.952e-40 Identity = 83/111 (74.77%), Postives = 94/111 (84.68%), Query Frame = -3 Query: 369 QLALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSS-GSNHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALLGQKMGLGNTVAPST 698 QLA+TRTVEAL EG+PNPEIDSY DPRAPKSSS G +H+KGPF+EAIVFMIGGGNY+EYGSLQEL +RQ VK+VIYG TEIL G E VEQL LLG+KMGLG VA ++ Sbjct: 512 QLAVTRTVEALTEGKPNPEIDSYRFLDPRAPKSSSSGGSHVKGPFREAIVFMIGGGNYVEYGSLQELTQRQLTVKNVIYGATEILNGGELVEQLGLLGKKMGLGGPVASTS 622
BLAST of CF833237 vs. ExPASy Swiss-Prot
Match: SLY1_ORYSJ (SEC1 family transport protein SLY1 OS=Oryza sativa subsp. japonica GN=SLY1 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.392e-34 Identity = 70/103 (67.96%), Postives = 84/103 (81.55%), Query Frame = -3 Query: 390 QLALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSSGSNHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALLGQKMGLG 698 QLA TR VEAL+EG+PNPE+D+YL+FDPRAPKS + + +GPF+EAIVFMIGGGNY+EY SL EL +R Q K VIYG TEIL G EF++QL+ LGQK GLG Sbjct: 513 QLAATRAVEALMEGKPNPEVDNYLLFDPRAPKSGT-AGQFRGPFREAIVFMIGGGNYIEYRSLTELTQRSQTTKQVIYGATEILNGVEFIQQLSELGQKAGLG 614
BLAST of CF833237 vs. ExPASy Swiss-Prot
Match: SCFD1_MOUSE (Sec1 family domain-containing protein 1 OS=Mus musculus GN=Scfd1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18 Identity = 46/99 (46.46%), Postives = 68/99 (68.69%), Query Frame = -3 Query: 402 LALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSSGS-NHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALLGQK 695 L +TR ++ L+E + NPE D Y FDP+ +S+ S K PF+EAIVF++GGGNY+EY +L + K +Q KH++YG +EI +F++QL+ LGQK Sbjct: 542 LPVTRILDNLMEMKSNPETDDYRYFDPKMLRSNDSSVPRNKSPFQEAIVFVVGGGNYIEYQNLVDYIKAKQG-KHILYGCSEIFNATQFIKQLSQLGQK 639
BLAST of CF833237 vs. ExPASy Swiss-Prot
Match: SCFD1_RAT (Sec1 family domain-containing protein 1 OS=Rattus norvegicus GN=Scfd1 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.417e-18 Identity = 46/99 (46.46%), Postives = 68/99 (68.69%), Query Frame = -3 Query: 402 LALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSSGS-NHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALLGQK 695 L +TR ++ L+E + NPE D Y FDP+ +S+ S K PF+EAIVF++GGGNY+EY +L + K +Q KH++YG +EI +F++QL+ LGQK Sbjct: 540 LPVTRILDNLMEMKSNPETDDYRYFDPKMLRSNDSSVPRNKSPFQEAIVFVVGGGNYIEYQNLVDYIKGKQG-KHILYGCSEIFNATQFIKQLSQLGQK 637
BLAST of CF833237 vs. ExPASy Swiss-Prot
Match: SCFD1_HUMAN (Sec1 family domain-containing protein 1 OS=Homo sapiens GN=SCFD1 PE=1 SV=4) HSP 1 Score: 88.9669 bits (219), Expect = 2.688e-17 Identity = 44/99 (44.44%), Postives = 67/99 (67.68%), Query Frame = -3 Query: 402 LALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSSGS-NHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALLGQK 695 L +TR ++ L+E + NPE D Y FDP+ + + S K PF+EAIVF++GGGNY+EY +L + K +Q KH++YG +E+ +F++QL+ LGQK Sbjct: 545 LPVTRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLVDYIKGKQG-KHILYGCSELFNATQFIKQLSQLGQK 642
BLAST of CF833237 vs. ExPASy Swiss-Prot
Match: SLY1_SCHPO (Protein sly1 OS=Schizosaccharomyces pombe GN=sly1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14 Identity = 39/101 (38.61%), Postives = 69/101 (68.32%), Query Frame = -3 Query: 411 LTRTVEALVEGRPNP---EIDSYLMFDPRAPKSSSGSN-----HLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALL 689 +T V++L++ +P + +SYL+ DP++ ++ + +N + + F EAIV ++GGGNY+EYG+L + A+ Q P K +IYG+T+IL+ EF+E++A L Sbjct: 538 ITSIVQSLMDPGSSPASKQTESYLLLDPKSARAITVNNDPRAMNKRQTFSEAIVCVLGGGNYLEYGNLADWAREQNPKKRIIYGSTDILSPSEFMEEMASL 638
BLAST of CF833237 vs. ExPASy Swiss-Prot
Match: SLY1_DROME (Protein sly1 homolog OS=Drosophila melanogaster GN=Slh PE=2 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 36/99 (36.36%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 408 LALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSSGSNHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQP---VKHVIYGTTEILTGDEFVEQLALLG 695 L +T+ E ++E R N E D YL DP+ K + PF++A+VFM+GGGNY+EY +L + K++Q + +IYG + + +F+++L+ LG Sbjct: 549 LPVTKITEQVMECRSNAETDDYLYLDPKLLKGGEVLPKNRAPFQDAVVFMVGGGNYIEYQNLVDFIKQKQTSNVQRRIIYGASTLTNARQFLKELSALG 647
BLAST of CF833237 vs. ExPASy Swiss-Prot
Match: SCFD1_DICDI (Sec1 family domain-containing protein 1 homolog OS=Dictyostelium discoideum GN=scfd1 PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 40/97 (41.24%), Postives = 61/97 (62.89%), Query Frame = -3 Query: 405 LALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSSGSNHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPVKHVIYGTTEILTGDEFVEQLALLGQ 695 L +TR VE++++ + + D YL DP+ S+ PFKEAIVF +GGGNY+EY +LQ+ +K+ K +IYG+ E+LT EF+ Q+ L + Sbjct: 580 LFVTRIVESIMDLKNTLDAD-YLYLDPKIQNKSNVPKRTT-PFKEAIVFTVGGGNYVEYQNLQDFSKKHN--KKIIYGSNELLTSKEFLNQIKNLNK 672
BLAST of CF833237 vs. ExPASy Swiss-Prot
Match: SLY1_DROVI (Protein sly1 homolog OS=Drosophila virilis GN=Slh PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12 Identity = 35/99 (35.35%), Postives = 59/99 (59.60%), Query Frame = -3 Query: 408 LALTRTVEALVEGRPNPEIDSYLMFDPRAPKSSSGSNHLKGPFKEAIVFMIGGGNYMEYGSLQELAKRQQPV---KHVIYGTTEILTGDEFVEQLALLG 695 L +T+ E ++E R N E D YL P+ K + PF++A+VFM+GGGNY+EY +L + K++Q + +IYG + + +F+++L+ LG Sbjct: 549 LPVTKITEQVMECRSNAETDDYLYLAPKLLKGGDVLPKNRAPFQDAVVFMVGGGNYIEYQNLVDFIKQKQTSNVHRRIIYGGSTLTNARQFLKELSALG 647 The following BLAST results are available for this feature:
BLAST of CF833237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF833237 ID=CF833237; Name=CF833237; organism=Citrus sinensis; type=EST; length=700bpback to top |