CF833300

Overview
NameCF833300
Unique NameCF833300
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF833300_ssr496 microsatellite CF833300_ssr496:496..507. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1039 contig Csv1_Contig1039:1..765. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF833300 vs. ExPASy Swiss-Prot
Match: SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.227e-38
Identity = 81/171 (47.37%), Postives = 105/171 (61.40%), Query Frame = 1
Query:  223 MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPIXXXXXXXXXXXXXXXANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 735
            M QES K + EET H T   PI C NNCGFFGS+ TNN+CSKCY+D++   +     +P+                 P      +  PAA    V++  +++ P K P+NRC  CRK++GLTGF+CRC  TFCS HRY++ H+C FDYK AG+D IAK NPVV A+KI KI
Sbjct:    1 MAQESWKNESEETVH-TPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTM---AAPVVEKKAFTPASSSKTPLEPAK---PDEVPAA---AVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161          
BLAST of CF833300 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.606e-37
Identity = 82/177 (46.33%), Postives = 102/177 (57.63%), Query Frame = 1
Query:  223 MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQS------KNPNPSPIXXXXXXXXXXXXXXXANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 735
            M QES K++ EET   T   PI C NNCGFFGS  T N+CSKCY+D +  ++      K P  S                 + P+  V E  D  +  V   +    E+  K P+NRC  CRK++GLTGFKCRC  TFCS+HRY+D H C FDYK  G++ IAK NP+VKADKI KI
Sbjct:    1 MAQESWKKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTVKAKTVATVVEKKPLAS---------------LSSTPL--VTEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160          
BLAST of CF833300 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.273e-34
Identity = 75/168 (44.64%), Postives = 99/168 (58.93%), Query Frame = 1
Query:  253 EETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNP----NPSPIXXXXXXXXXXXXXXXANPVGGVVENRDPAAQVVVV---DEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 735
            +ET  +    PI C NNCGFFGSA T N+CSKC+K+ ++KQ +      +   I               A      VE +   AQ   +    EG +     +   NRCS CRKR+GLTGF CRC   +C++HRYSDKH+C FDY++A +DAIAKANPVVKA+K++KI
Sbjct:    4 KETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of CF833300 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.273e-34
Identity = 75/168 (44.64%), Postives = 99/168 (58.93%), Query Frame = 1
Query:  253 EETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNP----NPSPIXXXXXXXXXXXXXXXANPVGGVVENRDPAAQVVVV---DEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 735
            +ET  +    PI C NNCGFFGSA T N+CSKC+K+ ++KQ +      +   I               A      VE +   AQ   +    EG +     +   NRCS CRKR+GLTGF CRC   +C++HRYSDKH+C FDY++A +DAIAKANPVVKA+K++KI
Sbjct:    4 KETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of CF833300 vs. ExPASy Swiss-Prot
Match: SAP4_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.347e-33
Identity = 76/170 (44.71%), Postives = 98/170 (57.65%), Query Frame = 1
Query:  253 EETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNP-NPSPIXXXXXXXXXXXXXXXANPVGGVVENRDPAAQVVVV---DEGASSENPE-----KRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 735
            +E   +    PI C NNCGFFGSA T N+CSKC+K+ ++K+ +     S I               A      V      A+ +VV   D   +SE        K   NRC+ CRKR+GLTGF CRC   +C+LHRYSDKH C FDY++A +DAIAKANPVVKA+K++KI
Sbjct:    4 KEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173          
BLAST of CF833300 vs. ExPASy Swiss-Prot
Match: SAP2_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Oryza sativa subsp. japonica GN=SAP2 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.317e-31
Identity = 70/174 (40.23%), Postives = 98/174 (56.32%), Query Frame = 1
Query:  223 MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPIXXXXXXXXXXXXXXXANPVGGVVENRDPAAQVVVVDEGASSENPEKRPA---NRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 735
            MEQ S++        + +  P+ CAN CGFFGSA+T  LCSKCY+  ++ Q+  P+ +                             PA + V VDEGA    P +  A   +RC+ C + +GL GF+CRC   FC  HRYSD+H+C +DY+ AG+DAIA+ANPVV+ DK+EK+
Sbjct:    1 MEQGSER--------QDERPPLPCANGCGFFGSADTRGLCSKCYRQTVMSQASAPSAAAQSAEHDQVVL------------------PAPEGVPVDEGAMPPPPPRHGAKTKSRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVRPDKVEKL 148          
BLAST of CF833300 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 5.005e-31
Identity = 68/159 (42.77%), Postives = 91/159 (57.23%), Query Frame = 1
Query:  283 PIYCANNCGFFGSANTNNLCSKCYKDYLLKQSK--------NPNPSPIXXXXXXXXXXXXXXXANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 735
            P  C NNCGFFGSA T N+CSKC+KD L +Q +        +   S                    V  +  +  P++  VV +  A  E  + +  +RC+ C KR+GLTGFKCRC   FC  HRY+D H+C F+Y +A Q+AIAKANPVVKA+K++KI
Sbjct:   15 PKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSGTSSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173          
BLAST of CF833300 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 5.533e-30
Identity = 68/169 (40.24%), Postives = 98/169 (57.99%), Query Frame = 1
Query:  253 EETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPIXXXXXXXXXXXXXXXANPVGGVVEN--RDPAAQVVVVDEGA------SSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 735
            EE   +T  +   C NNCGF GS+ T NLCS CY D  LKQ +  +                   +     ++    ++P+ ++ V ++ A      + +N ++RP NRC+ CRKR+GLTGFKCRC   FC +HRY + H C +D+KSAG++ IAKANP+VKA K++KI
Sbjct:    3 EEHRCQTPESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSVSPPSSSSSEISSPIIPPLLKNPSVKLEVPEKKAVISLPTTEQNQQQRP-NRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170          
BLAST of CF833300 vs. ExPASy Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.227e-30
Identity = 72/166 (43.37%), Postives = 88/166 (53.01%), Query Frame = 1
Query:  253 EETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQS-----KNPNPSPIXXXXXXXXXXXXXXXANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 735
            EE   ET      C NNCGFFGS+ T NLCS CY D  LKQ      K+   S +                 P     E + P      +       +P +RP NRC+ CRKR+GLTGF CRC  TFC  HRY + H C FD+KSAG++ IAKANP+V A K++KI
Sbjct:    3 EEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLSPVIAPVLENYAAELEIPTTKKTEEKKP------IQIPTEQPSPPQRP-NRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161          
BLAST of CF833300 vs. ExPASy Swiss-Prot
Match: SAP7_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.103e-29
Identity = 63/160 (39.38%), Postives = 86/160 (53.75%), Query Frame = 1
Query:  283 PIYCANNCGFFGSANTNNLCSKCYKDYLLKQS---------KNPNPSPIXXXXXXXXXXXXXXXANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 735
            P  C N CGFFGS +  NLCSKCY+    ++          KN    P                   +  VV   +P++  V  ++  +  +   RP NRC  C K++G+ GFKC+C  TFC  HRY +KH C FD+K  G+DAIAKANP+VKADK+++I
Sbjct:   16 PKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLKLPSCSIIAPGQKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQRI 175          
The following BLAST results are available for this feature:
BLAST of CF833300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
SAP9_ORYSJ4.227e-3847.37Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ1.606e-3746.33Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSJ1.273e-3444.64Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI1.273e-3444.64Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ORYSJ5.347e-3344.71Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ORYSJ1.317e-3140.23Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ARATH5.005e-3142.77Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH5.533e-3040.24Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ARATH7.227e-3043.37Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ARATH2.103e-2939.38Zinc finger A20 and AN1 domain-containing stress-a... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_03G05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833300 ID=CF833300; Name=CF833300; organism=Citrus sinensis; type=EST; length=764bp
CTCAACTGTGTCCCTTTTAGTTGATCGTTTACGTTTCTTATTTTATTAAA
GTTCCGTCTTATTTATTCTTTTTAGCTCTTGAATTATGAAATTTTAATTT
AAATCCTCTTATTTCAGATTCATGTTTAAAGGGTTTTAGCTTTTTTTCTC
TTGTAATTTGGAAATTTTAATTTTTCTAAATTTTTTGCCTGGTTAATTGA
AGCTAAAATAAAAAAAAAAAAAATGGAGCAAGAATCACAAAAGAGAAAGC
TAGAAGAGACTAGCCACGAGACTCAAAACACTCCAATTTATTGTGCAAAT
AATTGTGGATTTTTTGGAAGTGCAAACACTAATAATCTTTGTTCAAAGTG
TTACAAAGATTATCTTTTGAAGCAATCCAAAAACCCTAACCCTAGCCCAA
TTGAAGAGGAAAAGAACAAGAATAAAACGAACATTGAACAAAATGAAGCC
AACCCAGTTGGGGGTGTGGTTGAAAATAGAGATCCGGCTGCCCAAGTTGT
TGTTGTTGATGAAGGGGCATCTTCGGAGAACCCCGAAAAGCGGCCTGCTA
ACCGGTGCAGCTTTTGCCGCAAGAGGATTGGTTTGACGGGGTTTAAATGT
AGGTGTGAGCAGACATTTTGCTCCTTGCATCGATATTCTGATAAGCACAA
TTGCGTGTTTGATTACAAGAGTGCAGGGCAGGATGCCATTGCTAAAGCAA
ACCCCGTCGTGAAGGCGGATAAGATTGAGAAGATCTGACAAGGAGTTGTG
AAATGTGGTGGGCT
back to top