CF833333

Overview
NameCF833333
Unique NameCF833333
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7731 contig Csv1_Contig7731:74..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF833333 vs. ExPASy Swiss-Prot
Match: SEC14_YARLI (SEC14 cytosolic factor OS=Yarrowia lipolytica GN=SEC14 PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.542e-22
Identity = 48/95 (50.53%), Postives = 67/95 (70.53%), Query Frame = 1
Query:  382 ERHDDYHMMLRFLKARKFDIDKANHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYI 666
            +R DD   +LRFL+ARKFD+  A  MW    +WRKEFG +TI+EDF +KE  EV   YP  YH  DK+GRPVY+E +GKV+ +++ ++TT +R +
Sbjct:   50 DRTDDA-TLLRFLRARKFDVPLAQEMWENCEKWRKEFGTNTILEDFWYKEKKEVAKLYPQYYHKTDKDGRPVYVENVGKVNIHEMYKITTQERML 143          
BLAST of CF833333 vs. ExPASy Swiss-Prot
Match: SEC14_CANAL (SEC14 cytosolic factor OS=Candida albicans GN=SEC14 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.262e-21
Identity = 54/115 (46.96%), Postives = 75/115 (65.22%), Query Frame = 1
Query:  322 EELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKANHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYI 666
            E+   +D FRQ L   EL  +   D   +LRFL+ARKFDI KA  M+    +WR++FGV+TI++DF ++E   V   YP  YH  DK+GRPVY E LGKVD  K++++TT +R +
Sbjct:   32 EQKTTLDIFRQQLT--ELGYKDRLDDASLLRFLRARKFDIQKAIDMFVACEKWREDFGVNTILKDFHYEEKPIVAKMYPTYYHKTDKDGRPVYFEELGKVDLVKMLKITTQERML 144          
BLAST of CF833333 vs. ExPASy Swiss-Prot
Match: SEC14_KLULA (SEC14 cytosolic factor OS=Kluyveromyces lactis GN=SEC14 PE=3 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 4.794e-21
Identity = 50/117 (42.74%), Postives = 74/117 (63.25%), Query Frame = 1
Query:  316 DVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKANHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYI 666
            D E+   +  FR+  +++ L  +   D   +LRFL+ARKFD++ +  M+    +WRKEFGVDTI EDF ++E   V  YYP  YH  D +GRPVYIE LG V+  ++ ++TT +R +
Sbjct:   28 DSEQEAKLKEFRE--LLESLGYKERLDDSTLLRFLRARKFDLEASKIMYENCEKWRKEFGVDTIFEDFHYEEKPLVAKYYPQYYHKTDNDGRPVYIEELGSVNLTQMYKITTQERML 142          
BLAST of CF833333 vs. ExPASy Swiss-Prot
Match: SEC14_CANGA (SEC14 cytosolic factor OS=Candida glabrata GN=SEC14 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.542e-19
Identity = 46/95 (48.42%), Postives = 63/95 (66.32%), Query Frame = 1
Query:  382 ERHDDYHMMLRFLKARKFDIDKANHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYI 666
            ER DD   +LRFL+ARKFD+  A  M+    +WRKE+G +TIM+DF + E   V  YYP  YH  DK+GRPVY E LG V+  ++ ++TT +R +
Sbjct:   49 ERLDD-STLLRFLRARKFDVALAKEMFENCEKWRKEYGTNTIMQDFHYDEKPLVAKYYPQYYHKTDKDGRPVYFEELGAVNLTEMEKITTQERML 142          
BLAST of CF833333 vs. ExPASy Swiss-Prot
Match: SEC14_SCHPO (Sec14 cytosolic factor OS=Schizosaccharomyces pombe GN=sec14 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.014e-19
Identity = 45/93 (48.39%), Postives = 65/93 (69.89%), Query Frame = 1
Query:  382 ERHDDYHMMLRFLKARKFDIDKANHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDR 660
            ER DD   +LRFL+ARKF++ ++  M+ +  +WRKEFGVD ++++F + E   V  YYP  YH  D +GRPVY+E+LG +D  KL Q+TT +R
Sbjct:   46 ERLDDA-TLLRFLRARKFNLQQSLEMFIKCEKWRKEFGVDDLIKNFHYDEKEAVSKYYPQFYHKTDIDGRPVYVEQLGNIDLKKLYQITTPER 137          
BLAST of CF833333 vs. ExPASy Swiss-Prot
Match: SEC14_ASHGO (SEC14 cytosolic factor OS=Ashbya gossypii GN=SEC14 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.014e-19
Identity = 45/91 (49.45%), Postives = 61/91 (67.03%), Query Frame = 1
Query:  394 DYHMMLRFLKARKFDIDKANHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYI 666
            D   +LRFL+ARKFD+  A  M+    +WRKE GVDTI EDF ++E   V  +YP  YH  DK+GRPVYIE LG V+  ++ ++TT +R +
Sbjct:   55 DDSTLLRFLRARKFDVAAARAMFENCEKWRKENGVDTIFEDFHYEEKPLVAKFYPQYYHKTDKDGRPVYIEELGAVNLTEMYKITTQERML 145          
BLAST of CF833333 vs. ExPASy Swiss-Prot
Match: SEC14_YEAST (SEC14 cytosolic factor OS=Saccharomyces cerevisiae GN=SEC14 PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 5.861e-19
Identity = 45/105 (42.86%), Postives = 68/105 (64.76%), Query Frame = 1
Query:  352 QSLIMDELLPERHDDYHMMLRFLKARKFDIDKANHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYI 666
            + L+ D    ER DD   +LRFL+ARKFD+  A  M+    +WRK++G DTI++DF + E   +  +YP  YH  DK+GRPVY E LG V+ +++ +VT+ +R +
Sbjct:   41 RKLLEDAGFIERLDD-STLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERML 144          
BLAST of CF833333 vs. ExPASy Swiss-Prot
Match: YKJ1_YEAST (CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae GN=YKL091C PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 6.480e-18
Identity = 49/116 (42.24%), Postives = 77/116 (66.38%), Query Frame = 1
Query:  322 EELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKANHMWAEMLQWRKEFGVDTIMEDF------EFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTT 651
            E+ +A+  FR S+++++   ER DD   +LRFL+ARKFDI+ +  M+ E  +WR+E+G +TI+ED+      E KE  ++   YP  YH VDK+GRP+Y E LG ++  K+ ++TT
Sbjct:   28 EQEEALLQFR-SILLEKNYKERLDD-STLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDYENNKEAEDKERIKLAKMYPQYYHHVDKDGRPLYFEELGGINLKKMYKITT 141          
BLAST of CF833333 vs. ExPASy Swiss-Prot
Match: RETM_ANOGA (Protein real-time OS=Anopheles gambiae GN=retm PE=3 SV=4)

HSP 1 Score: 82.0333 bits (201), Expect = 3.010e-15
Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 1
Query:  394 DYHMMLRFLKARKFDIDKANHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYI 666
            DY  +LRFL+AR F IDKA  M  E LQWRKE  +D+I+ +++   + E   Y+P G+H  DK+GRP+YI RLG +D   L++    D  +
Sbjct:  254 DYQTLLRFLRARDFSIDKATGMLQESLQWRKEQRIDSILGEYKTPAVVE--KYFPGGWHHHDKDGRPLYILRLGTMDVKGLLKSVGEDELL 342          
BLAST of CF833333 vs. ExPASy Swiss-Prot
Match: RETM_AEDAE (Protein real-time OS=Aedes aegypti GN=retm PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.328e-14
Identity = 39/91 (42.86%), Postives = 57/91 (62.64%), Query Frame = 1
Query:  394 DYHMMLRFLKARKFDIDKANHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYI 666
            DY  +LRFL+AR F I+KA  M  E LQWR+E  +D I+ +++   + E   Y+P G+H  DK+GRP+YI RLG +D   L++    D  +
Sbjct:  251 DYQTLLRFLRARDFSIEKAASMLQESLQWREEHRIDDILGEYKTPVVVE--KYFPGGWHHHDKDGRPLYILRLGNMDVKGLLKSVGEDELL 339          
The following BLAST results are available for this feature:
BLAST of CF833333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
SEC14_YARLI2.542e-2250.53SEC14 cytosolic factor OS=Yarrowia lipolytica GN=S... [more]
SEC14_CANAL1.262e-2146.96SEC14 cytosolic factor OS=Candida albicans GN=SEC1... [more]
SEC14_KLULA4.794e-2142.74SEC14 cytosolic factor OS=Kluyveromyces lactis GN=... [more]
SEC14_CANGA1.542e-1948.42SEC14 cytosolic factor OS=Candida glabrata GN=SEC1... [more]
SEC14_SCHPO2.014e-1948.39Sec14 cytosolic factor OS=Schizosaccharomyces pomb... [more]
SEC14_ASHGO2.014e-1949.45SEC14 cytosolic factor OS=Ashbya gossypii GN=SEC14... [more]
SEC14_YEAST5.861e-1942.86SEC14 cytosolic factor OS=Saccharomyces cerevisiae... [more]
YKJ1_YEAST6.480e-1842.24CRAL-TRIO domain-containing protein YKL091C OS=Sac... [more]
RETM_ANOGA3.010e-1545.05Protein real-time OS=Anopheles gambiae GN=retm PE=... [more]
RETM_AEDAE3.328e-1442.86Protein real-time OS=Aedes aegypti GN=retm PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03H03_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833333 ID=CF833333; Name=CF833333; organism=Citrus sinensis; type=EST; length=667bp
TTGTTTGACCCCTCTATTCATTGCTGAAAGCGCAGAGTGTCAGTGCCGCG
TTTCCCTCTCACGCGCCACCGAGAGATGTCGGGTCCTCTCGATCGGTTCG
CTAGGCCTTGTTTTGAGGGATTCTCACGAAGTGATGAGAGGAGAGAAAGG
AAATCTGATTTTGAGAACTCTGAGGATGAAAGGCGGACAAGGATTGGGTC
TCTGAACAAGAAAGCCTTAAATGCATCCACTAAGTTCAAGCATTCTCTGA
AGAAAAAGAGCAGTAGAAGGAAAAGTGATGGCCGGGTCAGCTCTGTTTCA
ATTGAGGATGTCCGTGATGTTGAGGAGCTTCAGGCTGTTGATGCATTTAG
ACAATCATTAATTATGGATGAATTGCTGCCTGAGCGACATGATGATTATC
ACATGATGTTAAGGTTCTTAAAAGCTAGGAAGTTTGATATTGACAAAGCA
AACCATATGTGGGCCGAGATGCTTCAATGGAGGAAGGAATTCGGTGTTGA
CACTATTATGGAGGATTTTGAGTTCAAAGAAATAAATGAAGTTTTGAGTT
ATTACCCTCATGGTTACCATGGTGTGGACAAGGAGGGAAGACCTGTTTAC
ATTGAAAGATTGGGAAAAGTTGATTCTAACAAACTTATGCAAGTTACCAC
TATGGATCGATATATAA
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